WERAM Information

Tag Content
WERAM ID WERAM-Sob-0069
Ensembl Protein ID Sb04g009080.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb04g009080 Sb04g009080.1 Sb04g009080.1
Sb04g009080 Sb04g009080.2 Sb04g009080.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 1.90e-25 89.5 358 428
Organism Sorghum bicolor
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                    +h++ ++F++pvdp  l ++dY++iik+PmdL ti+ rl  g+Y++p+ef++Dvrl f+Na++yn+++++v
  Sb04g009080.1 358 KHKFGWVFNKPVDPVaLGLHDYFTIIKHPMDLGTIRGRLSHGQYRNPKEFAEDVRLTFHNAMTYNPKGQDV 428
                    799****************************************************************9987 PP
Protein Sequence
(Fasta)		MASDPPGDGA GGEEPTPEPA PAVEAPPAPA VPPRSRWAEE IKVYTQPAPG PSPASAPAPA 60
PAPAPAPAPA PAPAPAPASA PVPAPAPAPA PVPAQAPNPL SETLSSIRRN IRRAEAAGAA 120
ARPDPAAPAS APTRTPSGER GAASGDPSSG LNRVGGRIPN GHGDDQAAAA AEKAEKARKR 180
RVRSELRRRL AGELDQVRVL SKRLKEAAEA LAQREASEPA PLPLMVLPTQ QQVVEAGYVQ 240
PHFSAGDMAV PMSAQVAAAV TPGRTLLQRR PLTVSVIHNE AFEKEKRTPK ANQLYQNSEF 300
LLAKDRIPPA DSHGRKKSKH HKKKHRSLES RGADFDAERR LYSHAFKKSS SLLSRLMKHK 360
FGWVFNKPVD PVALGLHDYF TIIKHPMDLG TIRGRLSHGQ YRNPKEFAED VRLTFHNAMT 420
YNPKGQDVHF MAEQLSGIFE AQWPEIEAEV NYLASCPPLP KKFPPPPIDL RFLERSDSMR 480
HHMALDTNSR PISHTPTYTR TPSMKKPRAK DPNKRDMTID EKRKLSENLQ NLPPEKLDAV 540
VQVIKNKNLS VMQHDDEIEV EIDSMDAETL WELDRFVANY KKNLSKQKRK AERAMLARQD 600
AELRAQHQHQ HQHPIQPPQP ISATQEPVGE KSPKQAAKDS LAGKQPPTSA PEQNEENRQN 660
ASSSSNSSSS SSDSGSSSSD SDSDSSSSDG SDAGNSS 697
Nucleotide Sequence
(Fasta)		ATGGCTTCCG ACCCTCCCGG CGACGGCGCC GGCGGGGAGG AGCCGACGCC GGAACCTGCC 60
CCCGCCGTGG AGGCGCCGCC TGCTCCCGCC GTTCCGCCCA GGTCGCGCTG GGCCGAGGAG 120
ATCAAGGTCT ACACCCAACC AGCTCCCGGC CCCTCCCCCG CCTCCGCCCC CGCCCCCGCC 180
CCCGCTCCTG CTCCTGCTCC TGCTCCCGCT CCCGCCCCTG CTCCTGCCCC TGCCTCCGCC 240
CCTGTTCCTG CCCCCGCCCC CGCCCCCGCC CCCGTTCCTG CGCAGGCCCC GAATCCCCTT 300
TCCGAAACCT TATCCTCGAT TCGCCGCAAC ATCCGCCGCG CGGAGGCGGC AGGCGCTGCG 360
GCGCGGCCCG ATCCGGCAGC GCCGGCCTCG GCTCCCACCC GGACCCCGTC TGGGGAACGC 420
GGTGCCGCCT CGGGGGACCC CTCATCCGGG CTGAACCGGG TCGGCGGCCG TATTCCTAAC 480
GGCCACGGGG ACGACCAGGC GGCCGCTGCA GCTGAGAAGG CTGAGAAAGC ACGGAAGCGC 540
AGGGTGAGGA GTGAGCTGCG GCGCCGGCTG GCGGGGGAGC TGGACCAGGT CCGCGTGCTC 600
TCCAAGCGGC TGAAGGAGGC TGCCGAGGCC CTGGCGCAGC GGGAGGCTTC TGAGCCCGCG 660
CCTTTGCCCT TGATGGTGCT GCCAACACAA CAGCAGGTGG TGGAGGCTGG TTATGTGCAG 720
CCACATTTCT CAGCTGGTGA TATGGCAGTG CCCATGTCTG CTCAGGTTGC AGCTGCCGTT 780
ACTCCTGGCC GCACGCTGCT GCAGCGCAGA CCACTAACCG TATCCGTTAT TCATAATGAA 840
GCCTTTGAAA AGGAGAAACG GACGCCAAAG GCCAATCAAT TGTACCAAAA TTCGGAGTTC 900
TTGCTTGCCA AGGATAGGAT TCCTCCCGCA GATTCACATG GGCGCAAGAA ATCCAAGCAC 960
CACAAGAAGA AGCATAGGTC ACTAGAATCT CGTGGCGCAG ACTTTGATGC TGAGCGGCGG 1020
CTCTACTCTC ATGCGTTCAA GAAGTCCTCA TCACTTCTGA GCCGCCTAAT GAAGCACAAG 1080
TTTGGGTGGG TGTTCAACAA GCCTGTTGAT CCAGTTGCAC TTGGTTTGCA TGATTATTTT 1140
ACTATTATCA AACACCCAAT GGATCTTGGC ACGATAAGGG GACGGCTCAG CCATGGGCAG 1200
TACAGGAACC CGAAGGAGTT CGCTGAGGAT GTCCGGCTCA CTTTCCATAA TGCGATGACA 1260
TATAACCCCA AGGGTCAGGA TGTGCATTTC ATGGCGGAGC AGTTGTCAGG AATCTTTGAG 1320
GCACAGTGGC CTGAGATTGA GGCTGAGGTT AACTACCTCG CATCATGTCC TCCATTGCCG 1380
AAGAAGTTTC CACCTCCACC AATTGACCTG CGCTTCCTAG AGAGGTCAGA TTCGATGAGA 1440
CACCACATGG CATTGGACAC CAATTCAAGA CCGATCAGTC ATACTCCCAC TTATACCCGG 1500
ACTCCATCAA TGAAGAAACC AAGGGCAAAG GATCCAAATA AGAGGGACAT GACAATAGAT 1560
GAGAAGCGTA AGCTTAGTGA GAACCTCCAG AATTTGCCGC CAGAGAAGCT TGATGCTGTT 1620
GTGCAAGTCA TTAAGAACAA GAACCTATCA GTTATGCAGC ATGATGATGA GATTGAGGTT 1680
GAAATTGATA GCATGGATGC TGAGACACTT TGGGAGCTTG ACAGGTTTGT GGCCAACTAC 1740
AAGAAGAACC TGAGCAAGCA AAAGAGAAAG GCTGAGCGAG CGATGCTTGC CAGACAAGAT 1800
GCAGAGTTGC GTGCACAGCA CCAGCACCAG CACCAGCACC CTATACAACC ACCGCAACCA 1860
ATCTCAGCCA CCCAAGAACC TGTTGGTGAA AAATCTCCAA AGCAAGCTGC GAAAGATTCG 1920
CTGGCAGGCA AGCAACCGCC AACGTCTGCG CCAGAACAAA ATGAGGAGAA CAGACAGAAT 1980
GCAAGTAGTT CAAGCAATTC AAGCAGCTCC AGCAGTGACT CAGGATCATC TTCTAGTGAC 2040
TCAGACAGTG ATAGCTCCTC TTCAGATGGA TCTGATGCTG GCAATTCATC TTGAGATATA 2100
GGTTCAGAAG TTTTGTCGAG TAGACAATAA CTGTCTATTT GACGTGGCAA TGGCACCATA 2160
AGATTGTACA TGCTTACCTT GTCTGGCTTA GGAAACCTCC TGTATTTTTA GTAGCTTTTG 2220
TATGTGGATT CACCCGCCGG AGGCAGTAAC TTGTAGGTTT GTGGTGTACC CGCCTAATAA 2280
GACTAGGCTT GTTGCTGACA CCGTTCATCG TACACCGCAC TGTTGCTAGG AGCCCTCTGG 2340
TTGGCTCAGT ACACATTAGC GGCAGCTTGA ACATCGATTC TGTTTAGCTG TATGCATTGT 2400
TTCTTCCTTT TGTTAACTGA CTGATGAAAG CATTGACAAG CCATATAACC CCCCGTTGGT 2460
GTTTTAGTTT GCCGCCATCT TTCTGTGGAG TACCAGTTAA CTGTTGTGGC TTCATT 2517
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0012 GRMZM2G010075_P01 Zea mays 91 0.0 802
WERAM-Sei-0066 Si016549m Setaria italica 82 0.0 730
WERAM-Tra-0252 Traes_6AS_5C6CBFDEF.2 Triticum aestivum 73 0.0 633
WERAM-Brd-0069 BRADI3G09460.1 Brachypodium distachyon 71 1e-178 624
WERAM-Hov-0110 MLOC_78113.1 Hordeum vulgare 73 6e-178 621
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 76 1e-171 600
WERAM-Lep-0026 LPERR02G09080.1 Leersia perrieri 72 7e-171 598
WERAM-Orni-0021 ONIVA02G11900.1 Oryza nivara 73 7e-169 591
WERAM-Org-0022 ORGLA02G0096900.1 Oryza glaberrima 73 9e-169 591
WERAM-Aet-0072 EMT26738 Aegilops tauschii 76 1e-168 590
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 72 2e-168 590
WERAM-Orr-0021 ORUFI02G10640.1 Oryza rufipogon 72 2e-168 590
WERAM-Orm-0024 OMERI02G11670.1 Oryza meridionalis 73 2e-167 587
WERAM-Orgl-0023 OGLUM02G10650.1 Oryza glumaepatula 73 7e-167 585
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 74 3e-165 579
WERAM-Orbr-0025 OB02G19550.1 Oryza brachyantha 78 2e-162 570
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 80 7e-154 541
WERAM-Ori-0024 BGIOSGA007894-PA Oryza indica 80 3e-153 539
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 53 6e-95 346
WERAM-Thc-0011 EOX94205 Theobroma cacao 55 3e-94 343
WERAM-Prp-0041 EMJ12560 Prunus persica 56 1e-93 341
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 47 8e-93 338
WERAM-Met-0054 KEH39252 Medicago truncatula 55 8e-92 335
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 46 1e-88 324
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 63 1e-84 311
WERAM-Sot-0029 PGSC0003DMT400027384 Solanum tuberosum 53 5e-84 309
WERAM-Sol-0141 Solyc12g014170.1.1 Solanum lycopersicum 47 3e-83 307
WERAM-Amt-0025 ERN13953 Amborella trichopoda 44 4e-82 303
WERAM-Brr-0152 Bra030643.1-P Brassica rapa 50 6e-80 296
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 59 3e-79 293
WERAM-Bro-0142 Bo8g006010.1 Brassica oleracea 50 5e-79 293
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 51 6e-76 283
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 51 4e-75 280
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 44 2e-59 228
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 38 4e-45 180
Created Date 25-Jun-2016