WERAM Information

Tag Content
WERAM ID WERAM-Pot-0139
Ensembl Protein ID POPTR_0013s12320.1
Gene Name POPTR_0013s12320g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0013s12320 POPTR_0013s12320.1 POPTR_0013s12320.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 2.90e-26 92.5 154 529
Organism Populus trichocarpa
Domain Profile
  Ac_Reader Bromodomain
           BROMO.txt  20 pdYydiikePmdLsti 35 
                         ++  + +++P+ Ls +
  POPTR_0013s12320.1 154 TNTAQQVQQPVSLSIV 169
                         5566779******988 PP
           BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                         +h++ ++F+ pvd++ l ++dY++iik+PmdL t+k+rl ++ Y+speef++Dvrl f+Na++yn+++++v
  POPTR_0013s12320.1 392 KHKHGWVFNTPVDAKgLGLHDYFTIIKHPMDLGTVKSRLTKNWYKSPEEFAEDVRLTFHNAMKYNPKGQDV 462
                         799****************************************************************9987 PP
           BROMO.txt  28 ePmdLstikerleegnYs 45 
                          P+d+  i  r e+ nY 
  POPTR_0013s12320.1 512 PPLDMRRILDRSESMNYP 529
                         589999999999999996 PP
Protein Sequence
(Fasta)		MASGSVVEAG NEGGEVREKQ RYTESKVYTR KAFKGPKKNS LTSTNNNTAT TTADNNNSNT 60
NLTTTSTAAA GNNNVNTTAT TAPSATETAT VPTTTSTAAT ETAAAPATLS TTATKNATAA 120
ATTTATANET RDRDNNEKEL VEVRESEPVV VDNTNTAQQV QQPVSLSIVV SDASISRNRQ 180
EVQEVVPSVR EKIVERGQAV GNGVFLKEGL DNKVKVDLLS RSKQEKRELK KKLESELALV 240
RGLVKRIEAK EMQLGVGRLS NSRVVLVNDR VDNRLTRVNS EVGSVGVPRE STTILTPTPR 300
QSKPLNQLSI SVLENSQGVG EFVEKEKRTP KANQFYMNSE FLLAKDKFPP AESNKKSKLI 360
GKKQGAGESG YGFGTSTKIF KNCSTLLEKL MKHKHGWVFN TPVDAKGLGL HDYFTIIKHP 420
MDLGTVKSRL TKNWYKSPEE FAEDVRLTFH NAMKYNPKGQ DVHVMAEQLL DIFETKWAVI 480
KSDYDLEMRF AASYEVSIPT PTSRKAPPFV PPPLDMRRIL DRSESMNYPI IDTRSRPKSI 540
TTTPSSRTPV PKKPKAKDPH KRDMTYDEKQ KLSTNLQSLP SEKLDNIVQI IKKRSSALSQ 600
HDDEIEVDID SVDVETLWEL DRFVTNYKKS LSKNKRKAEL AIQARTEAQQ NVQQKIPASV 660
VAEAPKETKA DERDASTLSP VQVEKQGDNG SRSSSSSSSS SDSGSSSSDS DSDNSSASGS 720
DVGN 724
Nucleotide Sequence
(Fasta)		GAAATTAGGG CTTTAAAGAG GGATTGGGAG AAAATTAGGG TTTTAAAGGG GAAGTTAGGG 60
TTTTTGGGTG GTACATGTAT GGCTTCTGGG AGTGTAGTAG AAGCAGGAAA TGAAGGAGGA 120
GAAGTTAGAG AGAAACAAAG GTATACAGAG AGTAAGGTCT ACACTCGAAA AGCCTTTAAA 180
GGACCCAAAA AGAACAGCCT CACCAGCACC AACAATAACA CCGCCACCAC CACCGCTGAT 240
AACAATAACA GTAACACAAA CCTAACCACC ACTAGCACCG CAGCTGCTGG CAACAACAAC 300
GTCAACACCA CAGCAACCAC TGCCCCTTCT GCAACTGAAA CCGCTACTGT TCCAACCACC 360
ACCTCCACTG CTGCAACTGA AACTGCAGCT GCTCCAGCTA CTCTCTCCAC CACTGCAACT 420
AAAAATGCAA CTGCAGCAGC AACTACGACT GCAACTGCAA ATGAAACAAG GGACAGGGAC 480
AACAACGAGA AGGAGTTGGT TGAAGTGCGA GAATCAGAAC CTGTAGTGGT AGACAACACG 540
AACACTGCCC AGCAAGTGCA ACAGCCTGTT TCTCTCTCAA TTGTAGTTTC TGATGCTTCC 600
ATCAGCCGAA ATCGGCAGGA AGTTCAGGAG GTGGTGCCTA GTGTGAGAGA GAAAATTGTG 660
GAGAGGGGAC AAGCTGTGGG GAATGGGGTG TTTCTGAAGG AAGGGCTGGA TAACAAGGTG 720
AAGGTGGATT TGTTGTCACG GTCAAAGCAG GAGAAGAGGG AGCTCAAAAA GAAGTTGGAG 780
AGTGAGCTTG CTTTGGTTAG GGGTTTGGTG AAGAGGATTG AGGCTAAAGA AATGCAGCTT 840
GGTGTTGGTA GGTTGAGTAA TTCACGGGTG GTGCTGGTGA ATGATAGGGT TGACAATAGA 900
TTGACGAGGG TTAATTCAGA AGTGGGATCA GTGGGTGTTC CCCGTGAGAG TACTACTATT 960
CTTACTCCTA CCCCTAGGCA GTCTAAGCCC TTGAATCAGC TTAGTATATC GGTGCTAGAG 1020
AATAGCCAGG GTGTGGGTGA GTTTGTGGAG AAAGAGAAGA GGACACCAAA AGCAAATCAG 1080
TTTTATATGA ATTCAGAGTT CTTGCTTGCA AAAGACAAGT TTCCGCCAGC TGAGAGTAAC 1140
AAGAAGTCGA AATTGATTGG GAAGAAGCAG GGGGCAGGTG AATCTGGATA TGGGTTTGGG 1200
ACAAGCACTA AGATTTTCAA GAATTGCAGT ACGTTGCTTG AAAAACTGAT GAAGCATAAG 1260
CATGGTTGGG TGTTTAATAC TCCTGTTGAC GCGAAGGGTC TTGGTTTGCA TGATTACTTT 1320
ACCATTATCA AGCATCCAAT GGACTTGGGC ACGGTGAAGT CCAGGCTGAC CAAGAATTGG 1380
TACAAGTCCC CAGAAGAGTT CGCAGAGGAT GTGAGACTTA CATTTCACAA TGCTATGAAG 1440
TATAACCCGA AAGGGCAAGA TGTTCATGTA ATGGCAGAAC AGTTATTGGA TATATTTGAG 1500
ACCAAGTGGG CTGTTATAAA GTCGGATTAT GATCTTGAGA TGAGGTTTGC TGCCAGTTAT 1560
GAGGTGAGTA TTCCCACACC CACATCAAGA AAGGCTCCTC CATTTGTACC GCCCCCACTT 1620
GATATGAGGA GGATTTTGGA TAGATCAGAA TCAATGAATT ATCCTATTAT TGATACAAGA 1680
TCCAGACCCA AATCCATCAC CACTACACCT TCTAGTAGAA CCCCTGTTCC AAAGAAGCCT 1740
AAGGCAAAAG ATCCACATAA GCGAGACATG ACTTATGACG AGAAACAGAA GCTTAGTACA 1800
AACCTCCAGA GCTTACCTTC AGAGAAACTG GATAACATTG TACAGATAAT AAAGAAGAGG 1860
AGTTCAGCAC TGTCCCAACA TGATGATGAA ATTGAAGTGG ATATTGATAG TGTTGATGTG 1920
GAGACTCTGT GGGAGCTGGA TAGGTTTGTC ACCAACTACA AGAAGAGTTT AAGCAAGAAT 1980
AAGAGAAAAG CTGAACTTGC CATTCAAGCT AGAACAGAGG CTCAGCAGAA TGTGCAGCAG 2040
AAGATCCCAG CATCAGTTGT GGCGGAGGCA CCAAAAGAAA CAAAAGCAGA TGAAAGGGAC 2100
GCCTCCACTT TGTCACCTGT TCAAGTGGAG AAACAGGGAG ACAATGGAAG TAGGTCTAGT 2160
AGTTCAAGCA GCTCCAGCAG TGATTCTGGA TCTTCTTCAA GTGACTCTGA CAGTGACAAC 2220
TCCTCAGCGT CTGGATCAGA TGTAGGGAAT TAATTGAGTA CTCGAGTAGT TCCGATCTCA 2280
GAAATTTAGG GTAGATGGCT ATCCCCATGT TGGTGATATC ATGAATTCCG GATTGAATAG 2340
GAATCTGCCT TTGTTGTACA GTGAAGTTCT CAAGGCGACT GATTGTCCTG CCAGTGCAAA 2400
GTGGAGTCTC TCTTGTTGGA ACTGGTTTCT TGAATCTCCA TGTGGCTTAT CTGTGTAGTC 2460
TTGAATTTGT ATAATACCCC TTAGAATGTG GTGATGATTA GATACAGAGT GATGATTAGA 2520
TACAGTGGTT TGTTTCCCTC AGCATGTGTA CATGGCTAAC AACTTCTAGT CATTTTAGTT 2580
TTAGCTACCG CCCCGTTGAT TTTGTGCTAG CAGATGCAGG ATTCGTTGGT GTTATAGAAG 2640
AGATACTCTG TGATTCATGC CCAAGAAGTT GTTATAATGG CCAATAATTT TTCTG 2696
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0011 EOX94205 Theobroma cacao 68 1e-178 624
WERAM-Prp-0041 EMJ12560 Prunus persica 67 7e-168 588
WERAM-Glm-0172 GLYMA13G36821.1 Glycine max 66 5e-166 582
WERAM-Viv-0072 VIT_12s0028g02510.t01 Vitis vinifera 60 2e-153 540
WERAM-Met-0055 KEH39253 Medicago truncatula 65 4e-145 512
WERAM-Sot-0029 PGSC0003DMT400027384 Solanum tuberosum 61 4e-135 479
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 60 3e-130 463
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 59 3e-128 456
WERAM-Brr-0077 Bra015485.1-P Brassica rapa 55 4e-128 456
WERAM-Bro-0162 Bo8g114680.1 Brassica oleracea 54 1e-126 451
WERAM-Amt-0025 ERN13953 Amborella trichopoda 53 6e-125 445
WERAM-Sol-0098 Solyc07g062660.2.1 Solanum lycopersicum 54 4e-122 436
WERAM-Lep-0026 LPERR02G09080.1 Leersia perrieri 54 2e-93 340
WERAM-Sob-0069 Sb04g009080.1 Sorghum bicolor 54 3e-93 340
WERAM-Zem-0006 GRMZM2G004741_P01 Zea mays 53 7e-93 339
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 58 7e-93 339
WERAM-Brd-0069 BRADI3G09460.1 Brachypodium distachyon 54 7e-92 335
WERAM-Sei-0066 Si016549m Setaria italica 53 7e-92 335
WERAM-Tra-0252 Traes_6AS_5C6CBFDEF.2 Triticum aestivum 55 6e-91 332
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 56 9e-91 332
WERAM-Orr-0021 ORUFI02G10640.1 Oryza rufipogon 56 9e-91 332
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 55 1e-90 332
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 58 2e-90 331
WERAM-Orni-0021 ONIVA02G11900.1 Oryza nivara 56 2e-90 331
WERAM-Org-0022 ORGLA02G0096900.1 Oryza glaberrima 56 2e-90 331
WERAM-Orgl-0023 OGLUM02G10650.1 Oryza glumaepatula 56 3e-90 330
WERAM-Ori-0024 BGIOSGA007894-PA Oryza indica 58 4e-90 330
WERAM-Orm-0024 OMERI02G11670.1 Oryza meridionalis 57 5e-90 329
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 58 5e-90 329
WERAM-Hov-0110 MLOC_78113.1 Hordeum vulgare 56 7e-90 329
WERAM-Aet-0072 EMT26738 Aegilops tauschii 55 8e-90 328
WERAM-Orbr-0025 OB02G19550.1 Oryza brachyantha 55 2e-89 327
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 52 5e-81 300
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 46 4e-65 247
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 41 2e-51 201
WERAM-Orn-0042 ENSONIP00000004818.1 Oreochromis niloticus 33 4e-29 127
Created Date 25-Jun-2016