WERAM Information

Tag Content
WERAM ID WERAM-Bro-0162
Ensembl Protein ID Bo8g114680.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo8g114680 Bo8g114680.1 Bo8g114680.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 6.60e-24 85.3 338 408
Organism Brassica oleracea
Domain Profile
  Ac_Reader Bromodomain
     BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                   +h++ ++F+ pvd + l ++dY++ii++PmdL t+k++l +++Y+sp +f++Dvrl f+Na++yn+++++v
  Bo8g114680.1 338 KHKHGWVFNAPVDVKgLGLHDYFTIIEHPMDLGTVKSTLTNNMYKSPRDFAEDVRLAFHNAMTYNPPGQDV 408
                   799****************************************************************9987 PP
Protein Sequence
(Fasta)		MASEPVNGDG AREKQSIRVY TRKGKGQRKH SPYFAFEGGG GGDKPENNHV SPPETLARES 60
LDPLHEARAS APEARAILDA TDKNVTQPDS GQDDVNTVVV DENSIKEPPK SLPLAIEAPS 120
EALVVVDKNL IEVSSEDEEY VHVVDEDHLI KEANLVERDA TDATTESMPM EEDVDGRIRI 180
HVASKSKQQK EEIRKRLEDQ LSVVRGLVKK IEDKEGEIGA YHDSPLTNGG GRILSGFASA 240
GLPREVIRVP RPLNQLSISV LENTQGVNDH MEKEKRTPKA NQFYRTSEFL LGDKLPPAES 300
NKKSKSSSKK YGGEAGHGFG AGSKVFKNCS ALLERLMKHK HGWVFNAPVD VKGLGLHDYF 360
TIIEHPMDLG TVKSTLTNNM YKSPRDFAED VRLAFHNAMT YNPPGQDVHI MAQVLLQMFE 420
ERWAVIESDY NREMRFVTAY EMNLPASTMR SRLGPTMPPP PINVRNSTMD WSSRPADLQH 480
PKPNTTTPGR TPTSARTPAL KKPKANEPNK RDMTYEEKQK LSGHLQNLPP DKLDAIVQIV 540
NRRNTAVNLR DEEIEVDIDS VDPETLWELD RFVINYKKGL SKKKRKAELA MQARAEAERN 600
GQQQMAPAPV AREFSREGGN TAKKTLPTSL PSQVEKQNNE PSRSSSSSSS SSGSSSSSSD 660
SDSDSSSSSG SDQT 674
Nucleotide Sequence
(Fasta)		ATGGCTTCGG AGCCTGTTAA CGGAGATGGA GCTAGAGAGA AGCAGAGTAT TAGAGTCTAT 60
ACGAGGAAAG GTAAAGGTCA GAGGAAACAT TCACCCTACT TTGCATTTGA AGGTGGTGGC 120
GGCGGCGATA AACCAGAAAA CAATCATGTG AGTCCACCTG AAACCCTAGC TCGAGAGTCT 180
CTGGATCCTC TCCATGAGGC ACGTGCCAGT GCACCTGAAG CACGTGCCAT TTTAGACGCT 240
ACTGATAAGA ACGTTACTCA ACCTGACTCG GGGCAGGATG ATGTCAATAC AGTGGTTGTT 300
GATGAGAACT CTATCAAGGA ACCTCCTAAA AGCCTTCCCC TGGCTATCGA AGCGCCTTCG 360
GAAGCCCTTG TTGTTGTTGA CAAGAATCTC ATTGAAGTGT CTTCTGAGGA TGAGGAATAC 420
GTCCACGTGG TGGACGAAGA TCACCTTATT AAAGAAGCTA ACCTTGTGGA AAGAGATGCC 480
ACTGATGCTA CCACTGAAAG CATGCCAATG GAGGAGGATG TAGATGGACG GATAAGGATA 540
CACGTTGCCT CCAAGTCTAA GCAGCAGAAA GAGGAGATCA GGAAGAGGCT TGAAGATCAG 600
CTTAGCGTGG TCAGAGGTCT TGTTAAGAAG ATTGAGGACA AAGAGGGGGA GATTGGTGCG 660
TATCACGACT CCCCCCTCAC TAACGGGGGA GGAAGGATTC TCTCAGGGTT CGCGTCAGCT 720
GGACTTCCTC GTGAGGTCAT CAGAGTGCCA AGGCCTTTGA ACCAACTCAG TATATCAGTG 780
TTGGAGAATA CTCAAGGAGT CAATGATCAT ATGGAGAAAG AGAAGAGAAC ACCAAAGGCC 840
AATCAGTTTT ACAGAACTTC AGAGTTCTTG CTCGGTGACA AGCTGCCACC CGCGGAGAGT 900
AACAAGAAAT CAAAATCGAG TTCAAAGAAG TACGGTGGGG AGGCTGGGCA TGGTTTTGGT 960
GCAGGGTCCA AAGTTTTCAA GAACTGCAGC GCTCTACTAG AGAGGTTGAT GAAGCATAAG 1020
CATGGTTGGG TGTTCAATGC TCCTGTAGAT GTGAAGGGTC TTGGTTTGCA TGATTACTTC 1080
ACCATTATCG AACACCCTAT GGATTTGGGA ACCGTCAAGT CTACGTTAAC GAATAATATG 1140
TACAAGTCAC CGAGAGACTT TGCCGAGGAT GTTAGACTTG CTTTCCACAA TGCCATGACT 1200
TACAACCCAC CAGGACAAGA TGTCCATATC ATGGCGCAGG TGCTGTTACA GATGTTTGAG 1260
GAGAGGTGGG CTGTTATAGA GTCGGATTAT AATCGTGAAA TGAGGTTCGT CACTGCTTAT 1320
GAGATGAATC TTCCAGCTTC TACGATGAGG TCTAGACTGG GTCCAACGAT GCCTCCACCG 1380
CCTATCAATG TGAGGAATAG TACAATGGAT TGGAGTAGTC GCCCTGCGGA CTTGCAGCAC 1440
CCAAAACCAA ATACAACAAC GCCTGGCAGA ACACCGACCA GTGCAAGGAC CCCTGCTCTG 1500
AAGAAGCCAA AGGCAAACGA GCCGAATAAA AGAGATATGA CGTATGAAGA GAAGCAGAAG 1560
CTTAGTGGCC ACTTGCAGAA TTTGCCTCCA GACAAATTAG ATGCGATTGT GCAAATCGTT 1620
AACAGGAGAA ACACTGCTGT GAATCTAAGG GATGAAGAAA TTGAAGTTGA TATTGATAGT 1680
GTTGATCCGG AGACTTTGTG GGAGTTGGAC AGATTTGTAA TCAACTACAA GAAGGGATTG 1740
AGCAAGAAAA AGAGAAAAGC TGAGCTGGCT ATGCAAGCTA GAGCAGAAGC CGAGAGGAAT 1800
GGCCAACAAC AGATGGCTCC AGCACCAGTG GCACGTGAGT TTTCTAGGGA AGGTGGCAAC 1860
ACAGCTAAAA AGACACTCCC TACGTCATTA CCTTCTCAAG TGGAGAAGCA GAACAATGAG 1920
CCAAGCAGAT CAAGTAGTTC AAGCAGCTCT TCCAGTGGGT CCAGCAGCTC TTCTAGTGAT 1980
TCGGACAGCG ATAGCTCTTC GTCATCTGGA TCAGATCAGA CCTAG 2026
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0160 Bra032431.1-P Brassica rapa 89 0.0 1023
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 70 0.0 849
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 70 0.0 824
WERAM-Thc-0011 EOX94205 Theobroma cacao 60 2e-136 483
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 56 3e-133 473
WERAM-Glm-0145 GLYMA12G14296.1 Glycine max 61 1e-131 467
WERAM-Prp-0041 EMJ12560 Prunus persica 58 3e-131 466
WERAM-Met-0054 KEH39252 Medicago truncatula 59 5e-124 442
WERAM-Viv-0072 VIT_12s0028g02510.t01 Vitis vinifera 55 2e-123 440
WERAM-Sot-0029 PGSC0003DMT400027384 Solanum tuberosum 53 4e-108 389
WERAM-Amt-0025 ERN13953 Amborella trichopoda 52 1e-102 371
WERAM-Sol-0098 Solyc07g062660.2.1 Solanum lycopersicum 45 4e-99 359
WERAM-Sob-0069 Sb04g009080.1 Sorghum bicolor 49 2e-80 298
WERAM-Sei-0066 Si016549m Setaria italica 48 9e-80 295
WERAM-Zem-0006 GRMZM2G004741_P01 Zea mays 49 1e-79 295
WERAM-Hov-0110 MLOC_78113.1 Hordeum vulgare 42 3e-79 293
WERAM-Lep-0026 LPERR02G09080.1 Leersia perrieri 43 5e-79 293
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 56 3e-78 290
WERAM-Tra-0252 Traes_6AS_5C6CBFDEF.2 Triticum aestivum 43 6e-77 286
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 50 3e-76 283
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 43 4e-76 283
WERAM-Orni-0021 ONIVA02G11900.1 Oryza nivara 43 5e-76 283
WERAM-Org-0022 ORGLA02G0096900.1 Oryza glaberrima 43 6e-76 283
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 43 6e-76 283
WERAM-Orr-0021 ORUFI02G10640.1 Oryza rufipogon 43 6e-76 283
WERAM-Orm-0024 OMERI02G11670.1 Oryza meridionalis 43 9e-76 282
WERAM-Orgl-0023 OGLUM02G10650.1 Oryza glumaepatula 43 9e-76 282
WERAM-Aet-0072 EMT26738 Aegilops tauschii 50 1e-75 281
WERAM-Orbr-0025 OB02G19550.1 Oryza brachyantha 49 1e-75 281
WERAM-Brd-0069 BRADI3G09460.1 Brachypodium distachyon 47 1e-75 281
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 50 3e-75 280
WERAM-Ori-0024 BGIOSGA007894-PA Oryza indica 50 5e-75 280
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 53 2e-67 254
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 37 3e-58 224
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 38 9e-47 186
Created Date 25-Jun-2016