WERAM Information

Tag Content
WERAM ID WERAM-Sot-0029
Ensembl Protein ID PGSC0003DMT400027384
Gene Name PGSC0003DMG400010560
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400010560 PGSC0003DMT400027384 PGSC0003DMT400027384
PGSC0003DMG400010560 PGSC0003DMT400027385 PGSC0003DMT400027385
PGSC0003DMG400010560 PGSC0003DMT400027386 PGSC0003DMT400027386
PGSC0003DMG400010560 PGSC0003DMT400027387 PGSC0003DMT400027387
PGSC0003DMG400010560 PGSC0003DMT400027388 PGSC0003DMT400027388
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 2.70e-28 99.3 234 320
Organism Solanum tuberosum
Domain Profile
  Ac_Reader Bromodomain
             BROMO.txt  55 rlifnNakay 64 
                           +++++N++a+
  PGSC0003DMT400027384 234 NQMLKNCRAL 243
                           69*****986 PP
             BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssvq 72 
                           +h++ ++F++pvd + l ++dY+diik+PmdL t+k+rle++ Y+sp+ef++Dvrl f+Na++yn+++++v+
  PGSC0003DMT400027384 249 KHKHGWVFNQPVDTEgLGLHDYFDIIKNPMDLGTVKSRLETNLYKSPKEFAEDVRLTFQNAMTYNPKGQDVY 320
                           799*****************************************************************9997 PP
Protein Sequence
(Fasta)		MNGENRGSEE QQNMTESKVY RRKSFKGLNN IGDGLQHPHS EILGMDVKSS RKIVGLRLEA 60
ALEGSSSLNR ALTLENTGIF AGSGQENSAR INLTFKSKRE MRELRRKLQS ELDLVRSLVK 120
KIEAKDVQKT GPGIDKDSGV RRVHSDLSKM GQHLESRPLN QLSVSVLENS HDVGENVEKE 180
KRTPKVNQFY RNSEFLLAKD KIPPAESNKK SKSNAKKVSG PESGPGIELW KFSNQMLKNC 240
RALLERLMKH KHGWVFNQPV DTEGLGLHDY FDIIKNPMDL GTVKSRLETN LYKSPKEFAE 300
DVRLTFQNAM TYNPKGQDVY MMAEQLSKIF EEKWPTIEAD YMRELRLSMD SEVSLQTPTS 360
KKPPPLRPSG MRKTLDRSES TTRPVGSKTK SVAVSQSGRT TAPKKPKAKD PNKREMTYDE 420
KQKLSTSLQN LPSEKLENVV QIIKKRNSSL CQQDDEIEVD IDSVDTETLW ELDRFVIYYK 480
KSLSKNKRKT ELADQEKKET EQNVQEKNAN PVVVEIPKES KAEEKGTSSN LAQLENQGKN 540
ISQPGSSSTD SVSSSSDSDS ESSSGGASDA EHSPKS 576
Nucleotide Sequence
(Fasta)		TGGACTTTTA AGGCCCAATA ACCTTCCCAA CTCTACAGAA CCAAACACTT CCCACGCGCC 60
ACCCTCAACG CGTGGATAAC ATCTGCAAAC ACCAAGACAA ATGTTGACGC TCCGATCAAC 120
CCGAATCCAC GCCGTCGATC TCTGACCTTC TTCGCGATGA CAAAATCCTA GCCGTCAATA 180
CCGTCGTGGC AAGCACGCGA CTCGCATTTC TCCCTCCTCT TCTCCACTTA CCGACCACTA 240
TTCTTCTCCG ATATTTGGAA AAAAACAAAG AACGATTTGC AGTAAACAGC TGATTAATAG 300
AGAGAGAGAG AGACTGAGCA GCTGATTGAT AGAGAGAGAG AGAGAAACTC TGTGTGTGTA 360
TGTGAAGATC TACTAAAGGG ACAATGATGA ATGGTGAAAA TCGAGGATCG GAAGAGCAGC 420
AGAATATGAC TGAAAGCAAA GTCTACAGAC GGAAGTCGTT TAAAGGGTTA AATAACATAG 480
GTGATGGCTT ACAACATCCG CATTCTGAAA TCCTAGGTAT GGACGTCAAA TCATCTCGAA 540
AAATAGTTGG TTTGCGCTTA GAAGCGGCTT TAGAAGGCTC TTCGAGTCTG AATCGTGCGC 600
TAACATTGGA GAATACTGGA ATATTCGCAG GTAGTGGTCA AGAAAATAGT GCTAGAATCA 660
ATTTAACGTT CAAGTCCAAG CGGGAGATGA GAGAGCTAAG AAGAAAGCTG CAGAGTGAAT 720
TGGACTTGGT TAGGAGTTTG GTGAAGAAGA TTGAGGCAAA AGATGTACAG AAGACTGGCC 780
CTGGAATTGA TAAGGATAGT GGGGTGCGAC GGGTACATTC AGACTTGTCA AAAATGGGGC 840
AACATCTTGA GTCCAGGCCT TTGAATCAGT TAAGTGTATC GGTTTTGGAG AACAGCCATG 900
ATGTGGGTGA GAATGTGGAG AAAGAGAAGA GGACACCAAA GGTAAACCAA TTTTATAGGA 960
ACTCAGAATT TTTATTAGCT AAGGATAAGA TTCCCCCTGC TGAAAGCAAC AAGAAGTCGA 1020
AATCAAATGC AAAGAAAGTG AGTGGGCCAG AATCAGGACC TGGTATTGAG CTATGGAAGT 1080
TCTCAAATCA AATGCTAAAG AATTGTCGTG CTTTGCTTGA AAGATTGATG AAGCACAAGC 1140
ATGGTTGGGT GTTTAACCAG CCTGTTGATA CAGAAGGTCT TGGTTTACAT GACTATTTTG 1200
ACATTATTAA GAATCCAATG GACCTGGGAA CTGTGAAGTC CAGGCTTGAG ACTAATCTGT 1260
ACAAGTCTCC TAAAGAATTT GCTGAGGATG TGAGACTAAC ATTTCAAAAT GCCATGACGT 1320
ATAACCCAAA GGGCCAAGAT GTTTATATGA TGGCTGAGCA ACTTTCCAAG ATATTTGAGG 1380
AGAAATGGCC CACTATAGAG GCTGATTATA TGCGCGAGTT GAGATTGTCA ATGGACTCTG 1440
AGGTGAGTTT GCAGACTCCT ACATCTAAGA AACCTCCACC ATTGCGGCCC TCTGGAATGA 1500
GGAAGACTTT AGACAGATCA GAATCAACGA CCAGACCTGT TGGTTCCAAG ACTAAATCTG 1560
TCGCTGTCTC CCAATCTGGA AGGACCACTG CACCAAAGAA GCCGAAAGCA AAGGATCCCA 1620
ATAAAAGGGA GATGACATAT GATGAAAAGC AAAAGCTTAG CACAAGCCTA CAGAATTTGC 1680
CATCTGAAAA GCTTGAAAAT GTTGTACAGA TCATCAAAAA GAGGAATTCA TCTCTTTGCC 1740
AACAGGATGA TGAGATTGAA GTGGATATTG ACAGTGTTGA TACTGAGACC CTATGGGAGC 1800
TTGACAGGTT TGTTATCTAT TACAAAAAGA GCTTGAGCAA GAACAAAAGA AAAACTGAAC 1860
TTGCAGATCA AGAAAAAAAG GAAACCGAAC AGAATGTTCA GGAGAAGAAT GCTAACCCAG 1920
TTGTGGTAGA AATTCCAAAA GAAAGCAAAG CAGAAGAGAA AGGTACTTCC TCCAATCTTG 1980
CTCAACTAGA AAATCAGGGG AAAAATATTA GTCAACCAGG CAGCTCTAGC ACTGACTCTG 2040
TGTCATCATC AAGTGATTCT GATAGTGAAA GCTCCTCAGG AGGTGCATCT GATGCAGAAC 2100
ATTCACCAAA AAGTTGACTC TGTTGTCCAG ATACAATGTT CTCTTATTTA ATGTCTTGTG 2160
ATTTCAAAAT CACGATCATG CGTATGTGGT CCTTCAATCA AGAGGGTGCT GCTGCAAGTG 2220
GTTGTGGCAT ATGCTAGTGG CTGGTCTCAA TTTGTATAAT AGTAGCATCT AGTTTGCAGC 2280
AGCTTATGTA TATTTTGCTT ATGGAGTACT GATTTGTGCA GTTTGAAGTC ATTGTTTAGG 2340
TCACATGGAC CTGTGTACTC AGTGAGTGAT TGAATCACTT GAATGTGGTA CAACTTTTTT 2400
TATCTCTTCC TAACTTGTAC CAGTTTTAGG TGCTCTGTGA AAATATCCTA TGCTTCAATG 2460
AAGTAATAAA TTAATTAGGA CAATTATCTA ACTTCTAGTA TGTTTCAATG AATAATTGTT 2520
T 2522
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0011 EOX94205 Theobroma cacao 63 4e-146 515
WERAM-Viv-0072 VIT_12s0028g02510.t01 Vitis vinifera 54 2e-141 500
WERAM-Pot-0170 POPTR_0019s12050.1 Populus trichocarpa 61 2e-139 493
WERAM-Glm-0172 GLYMA13G36821.1 Glycine max 60 4e-137 485
WERAM-Prp-0041 EMJ12560 Prunus persica 61 9e-137 484
WERAM-Met-0055 KEH39253 Medicago truncatula 54 1e-122 437
WERAM-Amt-0025 ERN13953 Amborella trichopoda 51 4e-118 422
WERAM-Brr-0152 Bra030643.1-P Brassica rapa 57 2e-109 394
WERAM-Sol-0098 Solyc07g062660.2.1 Solanum lycopersicum 50 6e-109 392
WERAM-Bro-0142 Bo8g006010.1 Brassica oleracea 55 2e-107 387
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 56 5e-105 379
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 55 4e-103 372
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 58 2e-81 301
WERAM-Lep-0026 LPERR02G09080.1 Leersia perrieri 46 1e-78 291
WERAM-Sob-0069 Sb04g009080.1 Sorghum bicolor 53 7e-78 288
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 55 1e-77 288
WERAM-Orni-0021 ONIVA02G11900.1 Oryza nivara 45 4e-77 286
WERAM-Orm-0024 OMERI02G11670.1 Oryza meridionalis 45 6e-77 285
WERAM-Orgl-0023 OGLUM02G10650.1 Oryza glumaepatula 45 1e-76 285
WERAM-Org-0022 ORGLA02G0096900.1 Oryza glaberrima 45 1e-76 285
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 45 1e-76 285
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 45 1e-76 284
WERAM-Orr-0021 ORUFI02G10640.1 Oryza rufipogon 45 1e-76 284
WERAM-Hov-0110 MLOC_78113.1 Hordeum vulgare 47 1e-76 284
WERAM-Zem-0012 GRMZM2G010075_P01 Zea mays 52 1e-76 284
WERAM-Tra-0252 Traes_6AS_5C6CBFDEF.2 Triticum aestivum 47 2e-76 284
WERAM-Orbr-0025 OB02G19550.1 Oryza brachyantha 51 2e-76 284
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 51 4e-76 283
WERAM-Sei-0067 Si016554m Setaria italica 45 5e-76 282
WERAM-Ori-0024 BGIOSGA007894-PA Oryza indica 51 6e-76 282
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 46 4e-75 280
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 54 1e-74 278
WERAM-Aet-0072 EMT26738 Aegilops tauschii 52 1e-72 271
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 42 1e-62 238
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 39 2e-50 198
Created Date 25-Jun-2016