WERAM Information

Tag Content
WERAM ID WERAM-Arl-0016
Ensembl Protein ID fgenesh1_pg.C_scaffold_1000493
Gene Name GTE4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh1_pg.C_scaffold_1000493 fgenesh1_pg.C_scaffold_1000493 fgenesh1_pg.C_scaffold_1000493
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 5.00e-24 84.9 434 504
Organism Arabidopsis lyrata
Domain Profile
  Ac_Reader Bromodomain
                       BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                                     +h++ ++F+ pvd + l + dYy+ii++PmdL tik+ l+++ Y+sp ef++Dvrl f+Na++yn+++++v
  fgenesh1_pg.C_scaffold_1000493 434 KHKHGWVFNAPVDVKgLGLLDYYTIIEHPMDLGTIKSALMKNLYKSPREFAEDVRLTFHNAMTYNPEGQDV 504
                                     799****************************************************************9987 PP
Protein Sequence
(Fasta)		MASEPVNVGE GIDGARDKQS IKVYKRKGKG QRKQSPFFAF EASVGAIDKP EGQLDNENDV 60
SPPETLARES VDPISVVKNS VEEAALGTNS QGDNVATIAK NSTVLGDDSD KVIDKPLIEA 120
FPQAEPQDDT SLVAMETSVE VPSQRHKSQD DVNTVVVDEN SIKEPPKILA QEDDSTVIVD 180
KNPIEAPSQT LSVEDGNTLV VDKNPIEVSS EEDVHVVDAD NLIKEAHPEN FVERDATDAQ 240
QPAGLTSDSA RATAAGSMPM EEDADGRIRI HVASTTKQQK EEIRKKLEDQ LSVVRGMVKK 300
IEDKEGEIGA YNDSRVLINT GINNGGGRIL SGFASAGLPR EVIRAPRPVN QLSISVLENT 360
QGVNEHVEKE KRTPKANQFY RTSEFLLGDK LPPAESNKKS KSSSKKQGGD VGHGFGAGSK 420
VFKNCSALLE RLMKHKHGWV FNAPVDVKGL GLLDYYTIIE HPMDLGTIKS ALMKNLYKSP 480
REFAEDVRLT FHNAMTYNPE GQDVHLMAVT LLQIFEERWA VIEADYNREM RFVTGYEMNL 540
PTHTMRSRLG PTMPPPPINV RNTIDRADWS NRQPTTTPGS TPTSATPSGR TPALKKPKAN 600
EPNKRDMTYE EKQKLSGHLQ NLPPDKLDAI VQIVNKRNTA VKLRDEEIEV DIDSVDPETL 660
WELDRFVTNY KKGLSKKKRK AELAIQARAE AERNSQQQMA PALVAHEFSR EGGNTAKKTL 720
PTPLPSQMEK QNNETSRSSS SSSSSSGSSS SSDSDSDSSS SSGSDQT 767
Nucleotide Sequence
(Fasta)		ATGGCTTCGG AACCTGTTAA CGTAGGAGAA GGTATCGATG GAGCTAGAGA TAAGCAAAGC 60
ATTAAAGTTT ATAAGAGGAA AGGCAAAGGT CAGAGAAAAC AGTCACCTTT CTTTGCCTTT 120
GAGGCTAGTG TTGGTGCCAT CGATAAACCA GAGGGGCAAT TAGATAACGA GAATGATGTG 180
AGTCCTCCTG AAACCCTTGC TCGAGAGTCG GTGGATCCTA TATCTGTGGT GAAGAATTCT 240
GTTGAAGAAG CTGCTCTTGG GACTAACTCT CAGGGAGACA ATGTGGCCAC TATAGCCAAA 300
AACTCAACTG TGCTTGGTGA TGATTCAGAC AAAGTCATTG ACAAGCCTCT TATCGAAGCA 360
TTTCCTCAAG CCGAACCTCA GGATGATACG AGTTTGGTCG CTATGGAAAC GTCTGTCGAA 420
GTACCCTCTC AGAGACACAA ATCTCAAGAT GATGTGAATA CAGTGGTTGT CGATGAGAAC 480
TCTATCAAGG AACCTCCTAA AATCCTTGCC CAGGAAGATG ATTCTACTGT GATTGTTGAC 540
AAGAACCCTA TTGAAGCACC TTCTCAAACT CTGTCCGTGG AAGATGGCAA TACTCTTGTT 600
GTCGACAAGA ATCCCATTGA AGTGTCTTCT GAGGAAGATG TCCACGTGGT AGATGCAGAT 660
AATCTTATAA AAGAAGCTCA TCCTGAAAAC TTTGTGGAAA GAGATGCCAC TGATGCCCAA 720
CAACCCGCAG GGCTTACTTC TGATTCTGCT CGTGCTACTG CTGCTGGAAG CATGCCAATG 780
GAGGAGGACG CAGATGGACG TATTAGGATA CATGTAGCTT CCACAACGAA GCAACAGAAA 840
GAAGAGATCA GGAAGAAGCT TGAAGATCAG CTTAGCGTGG TCAGAGGAAT GGTAAAGAAG 900
ATAGAGGATA AAGAGGGCGA GATTGGTGCA TATAACGATT CTCGTGTTTT GATTAACACT 960
GGTATTAATA ATGGAGGAGG AAGGATTCTG TCAGGGTTTG CCTCAGCTGG ACTTCCTCGT 1020
GAAGTCATCA GAGCACCAAG GCCTGTAAAT CAACTAAGTA TATCAGTGTT GGAGAATACT 1080
CAGGGAGTCA ATGAGCATGT GGAAAAGGAG AAAAGAACAC CCAAGGCAAA TCAGTTTTAT 1140
AGAACTTCAG AGTTTTTACT AGGTGACAAG TTACCACCTG CAGAGAGTAA CAAGAAATCA 1200
AAATCGAGTT CAAAGAAGCA AGGAGGGGAC GTTGGGCATG GTTTTGGTGC AGGGTCTAAA 1260
GTTTTCAAGA ATTGCAGTGC TCTGCTTGAA AGGCTGATGA AGCATAAGCA TGGTTGGGTG 1320
TTCAATGCTC CAGTAGACGT GAAGGGTCTA GGTTTGCTTG ATTATTACAC CATTATCGAG 1380
CACCCTATGG ATTTGGGAAC TATCAAGTCT GCGTTAATGA AGAATTTGTA CAAGTCACCA 1440
AGAGAATTTG CAGAGGATGT TAGACTTACT TTCCACAATG CCATGACTTA CAACCCAGAA 1500
GGACAAGATG TCCATCTCAT GGCGGTAACA CTATTACAGA TCTTTGAGGA AAGATGGGCT 1560
GTAATAGAGG CAGATTATAA TCGTGAAATG AGATTTGTCA CTGGTTATGA AATGAATCTT 1620
CCAACTCATA CAATGAGGTC TAGACTGGGT CCTACGATGC CGCCACCACC TATTAATGTG 1680
AGGAATACGA TAGACAGAGC AGACTGGAGT AATCGTCAAC CGACTACAAC ACCTGGAAGT 1740
ACACCGACCA GTGCAACACC TTCTGGAAGG ACACCTGCTC TGAAGAAGCC GAAGGCAAAC 1800
GAACCAAATA AAAGAGATAT GACGTATGAG GAGAAGCAGA AGCTTAGTGG CCACTTGCAG 1860
AACTTGCCTC CAGATAAACT AGATGCAATT GTACAAATTG TTAATAAGAG GAATACTGCT 1920
GTGAAGCTAC GGGATGAAGA AATTGAAGTC GATATTGATA GTGTTGATCC AGAGACCCTG 1980
TGGGAGTTAG ACAGATTTGT AACCAACTAT AAAAAGGGCT TAAGCAAGAA AAAGAGAAAA 2040
GCTGAGCTAG CTATTCAAGC TAGAGCAGAA GCCGAGAGGA ATAGCCAACA ACAGATGGCT 2100
CCAGCACTAG TGGCACATGA GTTTTCTAGG GAGGGTGGCA ACACAGCTAA AAAGACACTT 2160
CCTACACCAC TACCTTCTCA AATGGAGAAG CAAAACAATG AGACAAGCAG ATCAAGTAGT 2220
TCAAGCAGTT CTTCCAGTGG TTCCAGCTCT TCTAGTGATT CGGACAGCGA TAGCTCTTCG 2280
TCATCTGGAT CAGATCAGAC CTAG 2305
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 92 0.0 1191
WERAM-Brr-0077 Bra015485.1-P Brassica rapa 76 0.0 958
WERAM-Bro-0142 Bo8g006010.1 Brassica oleracea 74 0.0 951
WERAM-Thc-0011 EOX94205 Theobroma cacao 60 1e-139 494
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 57 1e-137 488
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 61 1e-128 457
WERAM-Prp-0041 EMJ12560 Prunus persica 58 2e-124 444
WERAM-Met-0054 KEH39252 Medicago truncatula 62 4e-123 439
WERAM-Viv-0072 VIT_12s0028g02510.t01 Vitis vinifera 56 6e-120 429
WERAM-Sot-0029 PGSC0003DMT400027384 Solanum tuberosum 54 2e-106 384
WERAM-Amt-0025 ERN13953 Amborella trichopoda 52 9e-99 358
WERAM-Sol-0098 Solyc07g062660.2.1 Solanum lycopersicum 47 5e-96 349
WERAM-Sei-0066 Si016549m Setaria italica 49 1e-78 292
WERAM-Zem-0006 GRMZM2G004741_P01 Zea mays 47 2e-77 288
WERAM-Sob-0069 Sb04g009080.1 Sorghum bicolor 48 6e-77 286
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 58 5e-76 283
WERAM-Lep-0026 LPERR02G09080.1 Leersia perrieri 45 2e-74 278
WERAM-Tra-0252 Traes_6AS_5C6CBFDEF.2 Triticum aestivum 50 1e-73 275
WERAM-Hov-0110 MLOC_78113.1 Hordeum vulgare 48 3e-73 274
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 50 3e-73 273
WERAM-Aet-0072 EMT26738 Aegilops tauschii 50 5e-73 273
WERAM-Org-0022 ORGLA02G0096900.1 Oryza glaberrima 43 2e-72 271
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 45 2e-72 271
WERAM-Orni-0021 ONIVA02G11900.1 Oryza nivara 43 2e-72 271
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 43 3e-72 270
WERAM-Orr-0021 ORUFI02G10640.1 Oryza rufipogon 43 3e-72 270
WERAM-Orgl-0023 OGLUM02G10650.1 Oryza glumaepatula 45 4e-72 270
WERAM-Orm-0024 OMERI02G11670.1 Oryza meridionalis 45 5e-72 270
WERAM-Brd-0069 BRADI3G09460.1 Brachypodium distachyon 51 6e-72 270
WERAM-Orbr-0025 OB02G19550.1 Oryza brachyantha 48 6e-72 269
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 51 1e-71 268
WERAM-Ori-0024 BGIOSGA007894-PA Oryza indica 51 2e-71 267
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 54 1e-65 248
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 38 6e-55 213
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 38 1e-44 179
Created Date 25-Jun-2016