WERAM Information

Tag Content
WERAM ID WERAM-Tra-0252
Ensembl Protein ID Traes_6AS_5C6CBFDEF.2
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Traes_6AS_5C6CBFDEF Traes_6AS_5C6CBFDEF.2 Traes_6AS_5C6CBFDEF.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 7.10e-154 514.3 1 290
Organism Triticum aestivum
Domain Profile
  HDAC Class-I
            class-1.txt  22 mkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGas 109
                            mkp+r+++th+L+ +ygl  ++++++p+ a+ ++l++fh+++yi+fl++v+pe++++ ++ lk+fnvgedcPvfdgl+++cq+++Gas
  Traes_6DS_402EC38AD.1   1 MKPHRIRMTHSLLAQYGLLDQMQVLRPNPARDRDLCRFHADDYISFLRSVTPETQQDQIRALKRFNVGEDCPVFDGLYSFCQTYAGAS 88 
                            8*************************************************************************************** PP
            class-1.txt 110 leaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeef 197
                            + +a kLn++  diainw+GGlhhakk+easGfcyvnDivlailellk+h+rvly+did+hhGDgveeafyttdrvmtvsfhk+g+ +
  Traes_6DS_402EC38AD.1  89 VGGAVKLNHG-LDIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHQRVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGD-Y 174
                            *******987.79*************************************************************************.* PP
            class-1.txt 198 fPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfn 285
                            fPgtGd++d+g+ kgkyy++nvPl+dgidDesy+++fk+++ kv+e+f+P avvlqcGaDsl+gDrlg+fnlsi+ghaecvk+++sfn
  Traes_6DS_402EC38AD.1 175 FPGTGDVRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMAKVMEVFQPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVKYMRSFN 262
                            **************************************************************************************** PP
            class-1.txt 286 lpllvlGGGGYtlrnvaRcwtyetavvl 313
                            +pll+lGGGGYt+rnvaRcw+yet+v+l
  Traes_6DS_402EC38AD.1 263 VPLLLLGGGGYTIRNVARCWCYETGVAL 290
                            *************************986 PP
Protein Sequence
(Fasta)		EPCPIPNSDP LEQTLASFRR SIRRPEAEDA VPPLSDPAAP TSPPPLSPTS SPHGAPAAAS 60
GDFSSGLARD GAAVPNGHAD IDIRAAADDK ARKRRVRSEL RRQLASELDQ VRVLSKRLKA 120
AGEALAVEAS QSVPRPPPLL TAGYVQPQFS GSDAVTPVQA PVAASVPPVR SFLPRRPLIV 180
PEVHTESLDK EKRTPKANQL YQNSEFLLAK DRIPPSDSHG RKKTKHHKKK HRSSSAHGAG 240
YNAEQRLYSH AFKKSSSLLS RLMKHKFGWV FNKPVDPVAL GLHDYFAIIK HPMDLGTIKG 300
QLTRGHYRDP KEFANDVRLT FHNAMTYNPK GQDVHFMAEQ LLGIFEAQWP EIEAEVDYLA 360
SCPPLPKKFP PPPIDLRLLE RSDSLKHHMV LDSKSRPISH TPISVRTPSL KKPKAKDLDK 420
RDMTIDEKRK LSNNLQNLPP EKLDIVVQII KNKNLSVRQH EDEIEVEIDS MDAETLWELD 480
RFVANFKKNL SKQKRKAERA MLARQDVELR ALHAAQQTSQ QPNIGEKSPK LICTDLMVGE 540
QLAPSVPDQN NNNGPSASRS SSSSSTSSDS DSSSSDSDSD SSSTDGSNAA NSS 593
Nucleotide Sequence
(Fasta)		GAACCTTGCC CCATTCCTAA TTCCGACCCC CTTGAGCAAA CCCTAGCCTC GTTCCGTCGC 60
TCGATTCGTC GCCCGGAGGC TGAGGATGCG GTGCCGCCGC TCTCCGATCC GGCCGCACCG 120
ACTTCTCCTC CTCCTCTTTC TCCCACATCG TCGCCGCACG GGGCACCGGC TGCCGCCTCC 180
GGCGATTTCT CCTCCGGCCT TGCCCGGGAT GGCGCCGCCG TTCCAAACGG TCATGCCGAC 240
ATCGACATCC GGGCGGCCGC GGATGACAAG GCTCGGAAGC GCAGGGTCCG GAGCGAGCTG 300
CGTCGGCAGC TTGCGTCAGA ACTCGACCAG GTACGCGTGC TCTCCAAGCG CCTCAAGGCG 360
GCTGGCGAGG CCTTGGCAGT TGAGGCATCC CAGTCCGTAC CTCGGCCACC GCCTCTGCTC 420
ACTGCTGGGT ATGTGCAACC CCAATTCTCA GGCAGTGATG CTGTGACGCC CGTACAGGCC 480
CCAGTTGCTG CTTCTGTTCC TCCTGTCCGC TCGTTCCTAC CACGCCGCCC GCTAATTGTG 540
CCAGAAGTTC ACACAGAATC ACTTGACAAG GAAAAGCGAA CACCAAAGGC CAATCAGCTT 600
TACCAAAATT CAGAGTTCTT GCTTGCCAAA GATAGGATAC CGCCATCAGA TTCACATGGC 660
CGGAAGAAAA CCAAGCACCA CAAGAAGAAA CACCGTTCCT CGTCAGCTCA TGGTGCAGGT 720
TACAACGCTG AGCAGCGACT CTACTCGCAT GCATTTAAGA AGTCTTCATC CCTGCTGTCC 780
CGACTAATGA AGCACAAATT TGGGTGGGTG TTTAACAAGC CTGTTGATCC TGTTGCACTT 840
GGGTTGCATG ACTATTTTGC CATTATTAAG CACCCGATGG ATCTTGGCAC TATAAAGGGG 900
CAGCTTACTC GTGGGCATTA CAGGGACCCA AAGGAGTTTG CTAATGATGT ACGGCTAACA 960
TTCCATAATG CCATGACGTA TAATCCCAAA GGGCAGGATG TGCATTTCAT GGCTGAGCAA 1020
TTGTTAGGAA TTTTTGAAGC TCAGTGGCCT GAGATTGAGG CTGAGGTTGA CTACCTTGCG 1080
TCATGCCCAC CTTTGCCGAA GAAGTTTCCA CCTCCCCCGA TAGACTTGCG CTTACTAGAG 1140
AGGTCAGATT CCTTAAAGCA CCATATGGTG CTGGACTCCA AGTCAAGGCC GATAAGTCAT 1200
ACTCCTATTA GTGTCCGCAC TCCATCATTG AAGAAGCCGA AGGCAAAGGA TCTGGATAAA 1260
AGAGATATGA CGATAGATGA GAAGCGTAAA CTTAGCAATA ACCTTCAGAA CTTGCCTCCT 1320
GAAAAGCTTG ATATTGTTGT GCAGATCATT AAGAACAAGA ATCTTTCAGT TAGGCAGCAT 1380
GAAGATGAGA TTGAGGTTGA GATAGATAGC ATGGATGCGG AGACACTTTG GGAACTTGAT 1440
AGATTTGTTG CTAACTTCAA GAAGAACCTG AGCAAGCAAA AGAGGAAGGC TGAGCGTGCA 1500
ATGCTTGCAA GGCAAGATGT AGAGTTGCGT GCTCTGCATG CTGCACAACA AACAAGTCAA 1560
CAACCTAATA TTGGTGAAAA ATCTCCAAAG CTAATATGCA CAGATTTGAT GGTGGGCGAG 1620
CAATTAGCAC CTTCTGTGCC AGACCAAAAT AATAATAATG GACCGAGTGC CAGTAGATCT 1680
AGCAGCTCAA GCAGCACCAG CAGTGATTCA GATTCCTCTT CTAGTGACTC GGACAGTGAC 1740
AGCTCTTCTA CAGATGGATC AAATGCTGCC AATTCATCTT GA 1783
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Hov-0110 MLOC_78113.1 Hordeum vulgare 95 0.0 813
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 100 0.0 742
WERAM-Brd-0069 BRADI3G09460.1 Brachypodium distachyon 82 0.0 719
WERAM-Aet-0072 EMT26738 Aegilops tauschii 98 0.0 711
WERAM-Zem-0006 GRMZM2G004741_P01 Zea mays 68 2e-172 602
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 72 1e-168 590
WERAM-Orr-0021 ORUFI02G10640.1 Oryza rufipogon 72 1e-168 590
WERAM-Org-0022 ORGLA02G0096900.1 Oryza glaberrima 71 1e-168 590
WERAM-Orni-0021 ONIVA02G11900.1 Oryza nivara 71 3e-168 589
WERAM-Sob-0069 Sb04g009080.1 Sorghum bicolor 73 7e-168 588
WERAM-Orgl-0023 OGLUM02G10650.1 Oryza glumaepatula 71 6e-167 585
WERAM-Lep-0026 LPERR02G09080.1 Leersia perrieri 72 9e-167 584
WERAM-Orm-0024 OMERI02G11670.1 Oryza meridionalis 71 2e-166 583
WERAM-Sei-0066 Si016549m Setaria italica 75 2e-163 573
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 79 7e-163 571
WERAM-Orbr-0025 OB02G19550.1 Oryza brachyantha 81 2e-153 540
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 84 5e-152 535
WERAM-Ori-0024 BGIOSGA007894-PA Oryza indica 84 2e-151 533
WERAM-Prp-0041 EMJ12560 Prunus persica 48 5e-90 329
WERAM-Pot-0170 POPTR_0019s12050.1 Populus trichocarpa 55 4e-89 326
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 48 7e-87 318
WERAM-Met-0054 KEH39252 Medicago truncatula 54 5e-86 316
WERAM-Thc-0011 EOX94205 Theobroma cacao 48 9e-85 311
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 44 1e-83 308
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 59 1e-81 301
WERAM-Amt-0025 ERN13953 Amborella trichopoda 46 4e-81 300
WERAM-Sot-0105 PGSC0003DMT400032373 Solanum tuberosum 45 4e-81 300
WERAM-Sol-0098 Solyc07g062660.2.1 Solanum lycopersicum 45 3e-79 293
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 60 3e-77 286
WERAM-Bro-0090 Bo5g007360.1 Brassica oleracea 47 1e-75 281
WERAM-Brr-0152 Bra030643.1-P Brassica rapa 51 5e-75 279
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 51 1e-70 265
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 51 1e-69 261
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 42 6e-57 219
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 40 1e-45 182
Created Date 25-Jun-2016