WERAM Information

Tag Content
WERAM ID WERAM-Sot-0105
Ensembl Protein ID PGSC0003DMT400032373
Gene Name PGSC0003DMG401012433
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG401012433 PGSC0003DMT400032373 PGSC0003DMT400032373
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 5.20e-26 92 400 470
Organism Solanum tuberosum
Domain Profile
  Ac_Reader Bromodomain
             BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                           +h++ ++F+epv+ + l ++dY+diik+PmdL tik rl e  Y+sp ef++Dvrl+f+Na++yn+++++v
  PGSC0003DMT400032373 400 KHKHGWVFNEPVNVKsLGLHDYHDIIKHPMDLGTIKTRLSEDWYKSPMEFAEDVRLVFRNAMTYNPRGQDV 470
                           799***************************************************************99987 PP
Protein Sequence
(Fasta)		MDSDANDLNS RNRLRWGDNY KVYTRKRRRT LENTSTDVVP AATATVSSAA AAPEVSNSGR 60
DTNENDDVPE PSLQTQFRDC STLKGGTGGE QVAVSNGGEV RELTEDSCGR DEPRDGGVGP 120
LVEHRDGESA EGSCGRDVPE VGRGIDTGAA VVVSSGGEVP EGSSGSQPAM QNHRNEPQSD 180
NLEMENGYGK PVISRIKDRI RINLTGVRSS DEIRELGMSL ESELDQVRGL VKQLEAKQLQ 240
LTTYRTSING GNINAGSVTT FPGSITTVPG GSISSYSHPQ YMDDGVIKNR SLARMNSEVR 300
SAGHIGSRPF QRPNFLIVEN SNGSTDFVEK EKRTPKANQF YRNSEFLLGK DRLPPESNKR 360
LKTNGSGKKH SANSENGFGL DKHRLQVFRN CSSLLQRLMK HKHGWVFNEP VNVKSLGLHD 420
YHDIIKHPMD LGTIKTRLSE DWYKSPMEFA EDVRLVFRNA MTYNPRGQDV HVMAEQLSEI 480
FEERWAVIEA EYNSDWRYQT YHDVGAPTPT SRMTSYAPPF LHTPVSSRSL APHARQLHPL 540
DRSESMTRPV NPKMKTSNIA HVTRTPVPKK PKAKDLNKRD MTYEEKQKLS TNLQNLPSEK 600
LDAIVQIIKK RNTALSQDND EIEVDIDSVD AETLWELDRF VTNFKKSFSK YKRKAELLRA 660
REGAAQTARN VNPTSMVADA LKENGTGEKD TTPATLEGGR PADSASSSSS SSSSDSGSSS 720
SDSDSDSSSA SGSEAAQSPR T 741
Nucleotide Sequence
(Fasta)		CTTTACCTCT TTTTCCCCGA AAAAAATAAA ATCTCCAATC TCACTCCCCA AATTCACAAA 60
ATCCTCAAAA TTTAGTTTTC TTATTTTCCC AATAGATCCT TCAACTTTTC GTAATTTTTG 120
TTTTTGTCTC TCTATTCGGA AAAACCCTAG TTCCCTACTT CATCCATTTC CCCTGAAAAT 180
ATCGATTCCG ATCCAGCTAA GGTTTCCAGT TTTTCTTTTC AAATTCATGG GGTTTTAGGG 240
TTTTAGGAGG AAAGTTTCAA TTTTTCGGCT TTTCCAATCC CAGTTGTTGT GTTTTGTGCT 300
TTGTGTTTCG CTTGTTTTAG GGTTAGGGTT TAGTTTCTTC ATCCCTTTTG GTTGTTGTTG 360
GGTTGTGATT ACATGTATGG ATTCAGATGC AAACGATTTG AATTCAAGAA ATAGGTTGCG 420
TTGGGGCGAT AATTACAAAG TTTATACCCG GAAGCGCCGT AGAACCCTAG AGAATACTAG 480
TACTGACGTT GTTCCGGCCG CCACAGCCAC CGTTAGCTCA GCCGCAGCTG CACCGGAGGT 540
TTCGAACAGC GGGAGGGATA CGAACGAGAA TGATGATGTG CCGGAGCCGT CTTTGCAAAC 600
CCAATTTCGG GATTGTTCGA CTCTTAAAGG GGGGACAGGG GGTGAGCAAG TAGCTGTGAG 660
TAATGGTGGG GAAGTGCGGG AATTGACGGA AGATTCATGT GGTAGAGATG AACCTAGAGA 720
TGGAGGTGTC GGACCACTGG TGGAGCATAG AGATGGGGAA TCGGCTGAGG GTTCATGTGG 780
TAGAGATGTA CCTGAAGTTG GCCGGGGCAT TGACACTGGT GCAGCGGTGG TGGTGTCTAG 840
TGGTGGAGAA GTCCCAGAAG GCAGCAGCGG AAGTCAGCCA GCAATGCAGA ATCATAGAAA 900
TGAACCACAA AGTGACAATC TTGAAATGGA GAATGGGTAT GGTAAGCCGG TTATTTCAAG 960
AATTAAAGAT AGAATTAGGA TTAATTTAAC TGGAGTGAGG TCCAGCGATG AGATTAGAGA 1020
GCTCGGTATG AGCCTAGAGA GTGAGCTTGA TCAAGTTAGG GGCTTGGTAA AGCAGCTTGA 1080
AGCTAAACAG CTTCAGCTGA CAACATATAG GACTAGTATA AATGGTGGTA ATATTAATGC 1140
TGGTAGTGTT ACTACTTTCC CTGGTAGTAT TACTACTGTC CCTGGTGGTT CTATTAGCTC 1200
TTACAGTCAT CCACAGTATA TGGATGATGG TGTGATCAAG AATAGGTCTT TAGCGCGAAT 1260
GAATTCAGAG GTGCGTTCTG CTGGGCACAT TGGATCAAGA CCATTCCAGC GACCTAATTT 1320
TCTGATTGTG GAAAACAGCA ATGGTTCTAC TGACTTTGTG GAGAAGGAGA AGAGGACCCC 1380
AAAGGCTAAT CAGTTTTACA GGAATTCCGA GTTCCTCCTT GGTAAGGATA GACTGCCACC 1440
TGAAAGCAAT AAAAGACTGA AGACTAATGG CTCTGGGAAG AAGCACAGTG CCAATTCAGA 1500
GAATGGGTTT GGGCTTGATA AGCATAGACT TCAGGTTTTT AGGAATTGTA GCAGCTTGCT 1560
TCAGAGGTTA ATGAAACACA AGCACGGTTG GGTGTTTAAT GAGCCAGTGA ACGTGAAATC 1620
ACTTGGGCTA CATGATTATC ACGACATCAT TAAGCATCCT ATGGATTTGG GCACCATTAA 1680
GACTAGGTTA TCTGAGGATT GGTACAAGTC TCCAATGGAA TTTGCGGAGG ATGTACGACT 1740
TGTCTTTCGT AATGCCATGA CTTATAATCC TAGAGGGCAA GATGTACATG TTATGGCTGA 1800
ACAGTTATCA GAGATTTTCG AAGAGAGATG GGCAGTTATA GAGGCTGAGT ACAATTCAGA 1860
TTGGAGGTAC CAAACGTATC ATGATGTTGG TGCTCCCACT CCCACCTCAA GAATGACCTC 1920
TTATGCTCCT CCTTTTCTCC ACACCCCAGT GTCTTCTCGT TCTCTTGCTC CACATGCCCG 1980
TCAACTGCAT CCTTTGGATA GATCTGAGTC AATGACTAGG CCAGTTAATC CCAAGATGAA 2040
GACTTCAAAT ATAGCTCATG TTACTAGGAC ACCAGTTCCT AAGAAACCGA AGGCAAAAGA 2100
TCTCAATAAG AGAGACATGA CGTATGAGGA AAAGCAGAAG CTTAGCACTA ATCTTCAGAA 2160
TTTACCTTCA GAAAAGCTTG ATGCAATTGT TCAGATAATT AAGAAGAGGA ACACTGCACT 2220
TAGTCAAGAC AACGATGAGA TTGAAGTAGA TATAGATAGT GTTGATGCAG AAACACTCTG 2280
GGAGCTTGAT AGATTTGTAA CAAATTTCAA AAAGAGTTTT AGCAAGTACA AGAGAAAAGC 2340
TGAACTTCTT CGAGCCAGGG AAGGAGCTGC TCAGACTGCT CGAAATGTGA ACCCTACATC 2400
AATGGTTGCT GATGCACTGA AAGAAAATGG AACTGGTGAA AAAGATACAA CTCCTGCTAC 2460
CCTTGAAGGT GGAAGACCAG CGGATAGTGC AAGTAGCAGC TCAAGTAGTT CCAGCAGTGA 2520
TTCAGGCTCA TCCTCTAGTG ATTCTGATAG TGATAGTTCT TCGGCATCTG GATCAGAGGC 2580
GGCGCAATCA CCTAGAACAT GACAAGCTCT TGATGAAATT TTGATTATGA ATGCATTGGA 2640
GCAGGCGCCT GTTCAAACAC TCGTCTGAAA GACGTCTTGT GGCTCTTGCA TGATAAATTT 2700
CTTTCAAGAA CTTCAAGTAT GGGAGGAAGT CCTAGTGATT CTGGGAGCAT GTTAGCTGTT 2760
GGCTCTCACA TTCTTCTCGT CATAGGTGGT TATGGTGGTA GTGTGAGATA TTTAACACCT 2820
GTTTGTTGAA TTAAAATCTT GTGCTGAAAA AATCTATTTT TTCAGTATCA TTGTCAACAA 2880
TTTGGCAGGA TCACGCAAGG TCCTGCAGCT GTAACCTGGT GTACAAAGAG CATAATAGGC 2940
TGATGTGTAT TGTTTGTTTG CTTTGGGAGT ATTTATTGCA TTGTAATATC CCCATCAGGA 3000
ATTTAAATGG AAATAACAGT AGGGTGTACA TATTTTCTCA ATTCTTGTCT GGCGGCAAGT 3060
TTTTAACTTT TAAGCATCGA TGGGAGATTT TTCTCGATGT ATTTGCGTGT TTTGAGCTCT 3120
TATAAACTTG CTGCGTACTT GTGAAGTTGG GTTTCTCCTG GTTCC 3166
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0098 Solyc07g062660.2.1 Solanum lycopersicum 94 0.0 1296
WERAM-Viv-0072 VIT_12s0028g02510.t01 Vitis vinifera 55 7e-147 518
WERAM-Pot-0170 POPTR_0019s12050.1 Populus trichocarpa 53 2e-139 494
WERAM-Thc-0011 EOX94205 Theobroma cacao 54 7e-137 485
WERAM-Prp-0041 EMJ12560 Prunus persica 53 1e-136 484
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 53 3e-133 473
WERAM-Met-0054 KEH39252 Medicago truncatula 49 3e-124 443
WERAM-Amt-0025 ERN13953 Amborella trichopoda 49 2e-122 437
WERAM-Brr-0152 Bra030643.1-P Brassica rapa 46 2e-108 390
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 49 8e-108 389
WERAM-Bro-0142 Bo8g006010.1 Brassica oleracea 46 1e-107 388
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 49 4e-106 383
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 57 2e-94 344
WERAM-Tra-0252 Traes_6AS_5C6CBFDEF.2 Triticum aestivum 47 5e-92 336
WERAM-Brd-0069 BRADI3G09460.1 Brachypodium distachyon 47 2e-91 334
WERAM-Hov-0110 MLOC_78113.1 Hordeum vulgare 47 2e-91 334
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 48 8e-91 332
WERAM-Sob-0069 Sb04g009080.1 Sorghum bicolor 47 1e-90 331
WERAM-Lep-0026 LPERR02G09080.1 Leersia perrieri 46 3e-90 330
WERAM-Sei-0047 Si013421m Setaria italica 44 4e-90 330
WERAM-Zem-0006 GRMZM2G004741_P01 Zea mays 46 7e-90 329
WERAM-Aet-0072 EMT26738 Aegilops tauschii 53 2e-88 324
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 43 2e-84 310
WERAM-Org-0022 ORGLA02G0096900.1 Oryza glaberrima 44 3e-84 310
WERAM-Orni-0021 ONIVA02G11900.1 Oryza nivara 46 3e-84 310
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 46 5e-84 310
WERAM-Orr-0021 ORUFI02G10640.1 Oryza rufipogon 46 5e-84 310
WERAM-Orgl-0023 OGLUM02G10650.1 Oryza glumaepatula 46 5e-84 310
WERAM-Orm-0024 OMERI02G11670.1 Oryza meridionalis 46 2e-83 308
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 53 5e-83 306
WERAM-Orbr-0025 OB02G19550.1 Oryza brachyantha 52 6e-83 306
WERAM-Ori-0024 BGIOSGA007894-PA Oryza indica 53 7e-83 306
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 57 6e-78 289
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 43 4e-69 260
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 37 3e-57 221
WERAM-Myl-0068 ENSMLUP00000005696.2 Myotis lucifugus 30 2e-30 131
Created Date 25-Jun-2016