WERAM Information

Tag Content
WERAM ID WERAM-Bro-0090
Ensembl Protein ID Bo5g007360.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo5g007360 Bo5g007360.1 Bo5g007360.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 1.10e-22 81.4 399 469
Organism Brassica oleracea
Domain Profile
  Ac_Reader Bromodomain
     BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                   +h++ ++F+ pvd + l ++dY++ii++PmdL t+k+ l ++ Y+sp ef++Dvrl f+Na++yn+++++v
  Bo5g007360.1 399 KHKHGWVFNAPVDVKaLGLHDYFTIIEHPMDLGTVKSALTRNVYESPREFAEDVRLTFHNAMTYNPPGQDV 469
                   799****************************************************************9987 PP
Protein Sequence
(Fasta)		MASEPVDDGG REKQSIRVYT RKGKGQSKQS PFFAFAADEI RKANNRRVNP PETLARESSD 60
PIAVEKTALE TKSRDDAGAS VAKVIDKPLV EAFRDDDDAS LAAADKSVIQ TVPGPLVQDD 120
ANTIVDDVNT VVVDENSIKE PSESLAREED VTTVVVDKKA IEAHSQTLSV EDINVVDKNP 180
IEVSSENVVD GVKEGHPENL PERDAQQPAG VTSDSAGDSM PMEEDVDGRV KIHVASKSKQ 240
QKEEIRKTLE DQLNVVRGLV KKIEDKEGGE IGAYDDSRLL ANTGITNGGG RILSGFSSAG 300
LPREVIRTPR PLNQLSISVL ENTQGFSEHV EKEKRTPKAN QFYRTSEFLL GDKLPPTESN 360
KKSKSKSNAK KHGGEVGHGL GAGSKVFKSC SALLERLMKH KHGWVFNAPV DVKALGLHDY 420
FTIIEHPMDL GTVKSALTRN VYESPREFAE DVRLTFHNAM TYNPPGQDVH IMAQVLLQMF 480
EERWAVIEAD YNRQMRFLTS YEMNLPASAM RSRLGPTMPP PPINVRNTID RADWSSHHPK 540
PTTTPGRTPI STTPSGRTPA LKKPKANEPN KRDMTYEEKQ KLSGHLQNLP PDKLDAIVQI 600
VNKRNTAVKL QDEEIEVDID SVDPETLWEL DRFVINYKKG LSKKKRKAEL ANQARAEAER 660
NGQQHMAPAP VACEFSREGG NTAKKTLPTP LPSQVEKQNN ETSRSSSSSS SSSSSSSSSD 720
SDSDSSSSSG SDQT 734
Nucleotide Sequence
(Fasta)		ATGGCTTCGG AGCCTGTTGA CGATGGAGGA AGAGAGAAGC AGAGCATTAG AGTTTACACG 60
AGGAAAGGTA AAGGTCAGAG TAAACAGTCG CCTTTCTTCG CCTTTGCCGC CGATGAAATT 120
AGGAAAGCAA ACAATCGTCG TGTGAATCCT CCCGAAACTC TAGCTCGAGA GTCTTCGGAT 180
CCTATAGCTG TAGAAAAGAC TGCTCTTGAG ACCAAGTCGC GGGACGACGC TGGGGCCAGT 240
GTAGCTAAAG TGATTGATAA GCCTCTCGTG GAAGCATTTC GTGATGATGA TGATGCCAGT 300
TTGGCCGCTG CTGATAAGAG CGTTATTCAA ACTGTACCAG GTCCTTTGGT TCAGGATGAT 360
GCGAATACTA TTGTAGACGA TGTCAATACA GTGGTTGTCG ATGAGAACTC TATAAAGGAA 420
CCTTCTGAAA GCCTTGCACG AGAAGAAGAT GTTACTACCG TGGTTGTTGA CAAGAAGGCT 480
ATTGAAGCTC ATTCTCAAAC TCTATCCGTG GAAGATATCA ATGTTGTTGA CAAGAATCCC 540
ATTGAAGTGT CTTCTGAAAA CGTGGTGGAT GGAGTAAAAG AAGGTCATCC TGAAAACCTT 600
CCTGAAAGAG ATGCCCAACA GCCAGCAGGG GTTACCTCTG ATTCTGCTGG TGACAGCATG 660
CCAATGGAGG AGGACGTAGA TGGACGCGTA AAGATACACG TTGCCTCCAA ATCGAAGCAA 720
CAGAAAGAGG AGATTAGGAA GACGCTTGAA GATCAGCTTA ACGTGGTCAG AGGTCTGGTA 780
AAGAAGATAG AGGATAAAGA GGGCGGCGAG ATTGGTGCGT ATGACGACTC TCGTCTCTTG 840
GCTAACACTG GTATTACTAA CGGAGGAGGA AGGATTCTCT CAGGTTTTTC GTCAGCTGGA 900
CTTCCTCGTG AGGTCATCAG AACACCAAGG CCTTTAAATC AACTAAGTAT ATCCGTGTTA 960
GAGAATACTC AGGGGTTCAG TGAGCATGTG GAGAAAGAGA AAAGAACACC CAAGGCAAAT 1020
CAGTTTTATA GAACTTCAGA GTTCTTACTT GGTGACAAGT TGCCACCCAC AGAGAGTAAC 1080
AAGAAATCAA AGTCAAAATC AAATGCAAAG AAGCACGGAG GGGAGGTTGG TCATGGTTTG 1140
GGTGCAGGGT CTAAAGTTTT CAAGAGTTGC AGTGCTCTAC TTGAAAGGCT GATGAAGCAT 1200
AAGCATGGTT GGGTGTTCAA TGCTCCTGTA GATGTGAAGG CTCTAGGTTT GCATGATTAC 1260
TTTACGATTA TCGAGCACCC TATGGATTTG GGAACTGTAA AGTCTGCATT AACAAGAAAT 1320
GTGTACGAGT CACCAAGAGA ATTTGCAGAG GATGTTAGAC TTACTTTCCA CAATGCCATG 1380
ACTTACAATC CACCGGGACA GGATGTCCAT ATCATGGCGC AAGTGCTATT ACAGATGTTT 1440
GAGGAGAGAT GGGCTGTCAT AGAGGCAGAC TATAATCGTC AAATGAGATT TCTCACTAGT 1500
TATGAGATGA ATCTTCCAGC TTCTGCAATG AGGTCTAGAC TGGGTCCTAC GATGCCACCA 1560
CCACCTATTA ATGTGAGGAA TACAATAGAT AGAGCAGACT GGAGTAGTCA TCATCCAAAG 1620
CCAACAACAA CGCCTGGCAG AACACCGATC AGCACAACAC CTTCTGGAAG GACACCTGCT 1680
CTGAAGAAGC CAAAGGCAAA CGAACCAAAT AAAAGGGATA TGACGTATGA AGAGAAGCAG 1740
AAGCTTAGTG GCCATTTGCA GAATCTGCCT CCAGACAAAC TAGATGCAAT TGTGCAAATT 1800
GTGAACAAGA GGAACACTGC TGTGAAGCTA CAGGATGAAG AAATTGAAGT CGATATAGAT 1860
AGTGTTGATC CGGAGACCCT GTGGGAGTTG GACAGATTTG TAATCAACTA CAAAAAGGGT 1920
TTGAGCAAGA AAAAGAGAAA AGCCGAGCTA GCGAATCAAG CTAGAGCAGA GGCCGAGAGG 1980
AATGGCCAAC AACATATGGC TCCAGCACCA GTGGCATGTG AGTTTTCTAG GGAGGGTGGA 2040
AACACAGCTA AAAAGACACT CCCTACACCA TTACCTTCTC AAGTGGAGAA GCAAAACAAT 2100
GAGACAAGCA GATCAAGTAG TTCAAGCAGC TCCTCCAGTA GTTCCAGCTC TTCTAGTGAT 2160
TCGGACAGCG ATAGCTCTTC GTCATCTGGA TCAGATCAGA CTTAG 2206
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0077 Bra015485.1-P Brassica rapa 88 0.0 1082
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 71 0.0 886
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 70 0.0 860
WERAM-Glm-0145 GLYMA12G14296.1 Glycine max 60 4e-136 483
WERAM-Thc-0011 EOX94205 Theobroma cacao 56 3e-135 479
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 58 6e-134 475
WERAM-Prp-0041 EMJ12560 Prunus persica 58 1e-127 454
WERAM-Viv-0072 VIT_12s0028g02510.t01 Vitis vinifera 54 2e-123 440
WERAM-Met-0054 KEH39252 Medicago truncatula 60 8e-122 435
WERAM-Sot-0029 PGSC0003DMT400027384 Solanum tuberosum 53 9e-108 388
WERAM-Amt-0025 ERN13953 Amborella trichopoda 49 5e-102 369
WERAM-Sol-0098 Solyc07g062660.2.1 Solanum lycopersicum 45 1e-98 358
WERAM-Tra-0252 Traes_6AS_5C6CBFDEF.2 Triticum aestivum 44 4e-81 300
WERAM-Zem-0006 GRMZM2G004741_P01 Zea mays 52 7e-81 299
WERAM-Sei-0047 Si013421m Setaria italica 49 7e-81 299
WERAM-Org-0022 ORGLA02G0096900.1 Oryza glaberrima 43 3e-80 296
WERAM-Brd-0069 BRADI3G09460.1 Brachypodium distachyon 44 4e-80 296
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 57 4e-80 296
WERAM-Sob-0069 Sb04g009080.1 Sorghum bicolor 52 5e-80 296
WERAM-Orni-0021 ONIVA02G11900.1 Oryza nivara 44 6e-80 296
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 45 7e-80 296
WERAM-Orgl-0023 OGLUM02G10650.1 Oryza glumaepatula 44 8e-80 295
WERAM-Lep-0026 LPERR02G09080.1 Leersia perrieri 44 1e-79 295
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 44 1e-79 295
WERAM-Orr-0021 ORUFI02G10640.1 Oryza rufipogon 44 1e-79 295
WERAM-Orm-0024 OMERI02G11670.1 Oryza meridionalis 44 5e-79 293
WERAM-Hov-0110 MLOC_78113.1 Hordeum vulgare 45 7e-79 292
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 52 9e-79 292
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 45 1e-78 292
WERAM-Ori-0024 BGIOSGA007894-PA Oryza indica 52 1e-78 291
WERAM-Aet-0072 EMT26738 Aegilops tauschii 52 7e-78 289
WERAM-Orbr-0025 OB02G19550.1 Oryza brachyantha 52 3e-77 287
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 58 3e-69 260
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 37 6e-58 223
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 38 1e-45 182
Created Date 25-Jun-2016