WERAM Information

Tag Content
WERAM ID WERAM-Orbr-0003
Ensembl Protein ID OB01G17270.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OB01G17270 OB01G17270.1 OB01G17270.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 8.60e-26 90.5 148 218
Organism Oryza brachyantha
Domain Profile
  Ac_Reader Bromodomain
     BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                   +h++s++F+ pvd+  l ++dY++ii +PmdL t+k+rl +g Y+sp ef++Dvrl f+Na+ yn+++++v
  OB01G17270.1 148 KHKHSWVFNTPVDASaLGLHDYHTIITKPMDLGTVKSRLAAGHYKSPREFAADVRLTFQNAMRYNPKGQDV 218
                   89*****************************************************************9987 PP
Protein Sequence
(Fasta)		MASGPPSPSS KAFSRKSHAH GPGPNSSKAA AGGGGLSAFD AHNGTHIRTV TFSLSSSPAA 60
RRELRRRLTT ELAQVRATSK RLNSLPAPAP SSALSATDPS TPLPPHPPVS KHKSKKGPSN 120
PSLSAEARRK LYAPVFKTCG TVLARLMKHK HSWVFNTPVD ASALGLHDYH TIITKPMDLG 180
TVKSRLAAGH YKSPREFAAD VRLTFQNAMR YNPKGQDVHF MAEQLMNMFE EKWPEIEAEM 240
AQLSPQPPTP SSAAPRKPKE LDNSKVLERS DSTVHAAGME ATPKQQTGRP PVLKKPKARE 300
PNKREMTFWE KQRLSNNLQE LPPEKLDNVV QIIKKRNLSL SQHDDEIEVD IDSFDVETLW 360
ELDRFVTNYK KSISKNKRKA EHPMAGQDDT NHDLELEKTE HARLDEVEQD QMPSVQETLQ 420
NPEPESIDIE PPKENTADDN ERYVGSSSPV HLEDQKGENA GRSSSSGSSS SDSGSSSSDT 480
DTDSSSADGS DAAQSPRT 498
Nucleotide Sequence
(Fasta)		ATGGCCTCAG GGCCGCCGTC GCCGTCCAGC AAGGCGTTCT CCCGCAAATC CCACGCCCAC 60
GGCCCCGGGC CCAACTCCTC CAAGGCGGCG GCCGGAGGCG GAGGCCTCTC GGCGTTCGAT 120
GCGCACAACG GGACGCACAT CCGCACCGTC ACGTTCTCGC TCTCCTCGTC GCCGGCCGCC 180
CGCCGGGAGC TCCGGCGCCG CCTCACCACG GAGCTCGCAC AGGTGCGGGC CACTTCCAAG 240
CGCCTCAACT CGCTCCCCGC TCCCGCGCCT TCCTCCGCGC TCTCCGCCAC CGACCCTTCC 300
ACCCCGCTGC CCCCGCACCC GCCGGTCTCC AAGCACAAGT CCAAGAAGGG GCCCTCGAAC 360
CCGTCGCTCT CCGCGGAGGC GCGGCGCAAG CTCTACGCCC CCGTGTTCAA GACCTGCGGC 420
ACGGTGCTCG CTAGGCTGAT GAAGCACAAG CACAGCTGGG TGTTCAACAC GCCCGTCGAC 480
GCCAGTGCGC TTGGCCTGCA CGACTACCAC ACCATCATCA CCAAGCCCAT GGACCTCGGC 540
ACTGTCAAAT CGCGGCTGGC CGCTGGGCAC TACAAGTCGC CGCGAGAGTT CGCCGCTGAT 600
GTGCGTCTGA CCTTCCAGAA TGCCATGAGG TACAACCCCA AAGGGCAGGA TGTGCACTTC 660
ATGGCAGAGC AGCTAATGAA CATGTTTGAG GAGAAGTGGC CAGAAATTGA GGCTGAGATG 720
GCACAGCTGT CACCACAGCC GCCGACACCA TCATCGGCTG CGCCCAGGAA ACCAAAGGAG 780
TTAGATAATT CTAAGGTGCT AGAGAGGTCG GACTCAACAG TGCATGCTGC GGGGATGGAG 840
GCTACGCCAA AGCAACAGAC TGGTCGCCCC CCAGTTTTAA AGAAGCCCAA GGCAAGGGAG 900
CCTAATAAGA GGGAGATGAC CTTTTGGGAG AAACAACGTC TTAGTAATAA TCTCCAGGAG 960
TTGCCACCAG AGAAACTTGA CAATGTTGTG CAAATTATAA AGAAGAGAAA CTTGTCACTC 1020
AGTCAGCATG ATGATGAGAT TGAGGTTGAT ATAGATAGCT TTGATGTTGA GACATTATGG 1080
GAGCTCGATA GGTTTGTGAC AAACTACAAG AAAAGTATAA GCAAGAATAA GCGCAAGGCT 1140
GAGCATCCTA TGGCAGGGCA GGACGACACG AATCATGATC TAGAGCTAGA GAAGACAGAG 1200
CATGCGAGGT TGGACGAAGT GGAGCAGGAT CAGATGCCTT CAGTACAAGA GACGTTACAG 1260
AATCCCGAGC CAGAATCAAT CGATATTGAA CCACCTAAAG AAAACACAGC AGATGACAAT 1320
GAGAGGTATG TGGGTTCATC GTCACCTGTT CATTTGGAAG ATCAGAAAGG AGAGAATGCT 1380
GGTAGATCAA GTAGTTCTGG AAGTTCTAGT AGCGATTCAG GCTCTTCATC TAGTGATACA 1440
GACACAGATA GTTCATCAGC AGATGGCTCT GATGCTGCAC AGTCACCCAG AACGTAACAT 1500
CTATAGGTCA GGTCAG 1517
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 86 0.0 695
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 95 0.0 686
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 85 0.0 680
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 85 0.0 656
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 89 0.0 655
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 90 0.0 651
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 91 0.0 651
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 82 3e-178 622
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 96 3e-170 595
WERAM-Zem-0130 GRMZM2G400907_P01 Zea mays 73 2e-169 592
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 78 3e-169 592
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 73 7e-168 587
WERAM-Sei-0009 Si001167m Setaria italica 78 2e-167 586
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 74 8e-163 570
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 74 2e-162 569
WERAM-Orb-0001 OBART01G07260.1 Oryza barthii 96 5e-159 558
WERAM-Aet-0058 EMT09500 Aegilops tauschii 76 1e-120 431
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 57 1e-95 347
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 54 2e-90 330
WERAM-Thc-0011 EOX94205 Theobroma cacao 54 3e-88 323
WERAM-Prp-0041 EMJ12560 Prunus persica 52 3e-86 316
WERAM-Viv-0072 VIT_12s0028g02510.t01 Vitis vinifera 54 2e-85 313
WERAM-Sot-0029 PGSC0003DMT400027384 Solanum tuberosum 53 3e-85 313
WERAM-Glm-0145 GLYMA12G14296.1 Glycine max 60 7e-84 308
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 58 6e-83 305
WERAM-Amt-0025 ERN13953 Amborella trichopoda 61 2e-82 303
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 52 3e-80 296
WERAM-Met-0055 KEH39253 Medicago truncatula 59 7e-79 291
WERAM-Sol-0141 Solyc12g014170.1.1 Solanum lycopersicum 56 4e-77 286
WERAM-Brr-0152 Bra030643.1-P Brassica rapa 56 7e-76 282
WERAM-Bro-0142 Bo8g006010.1 Brassica oleracea 56 3e-75 280
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 56 7e-72 268
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 56 9e-72 268
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 51 7e-65 245
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 42 4e-52 203
Created Date 25-Jun-2016