WERAM Information

Tag Content
WERAM ID WERAM-Sot-0042
Ensembl Protein ID PGSC0003DMT400039787
Gene Name PGSC0003DMG400015378
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400015378 PGSC0003DMT400039787 PGSC0003DMT400039787
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 1.30e-26 93.9 377 447
Organism Solanum tuberosum
Domain Profile
  Ac_Reader Bromodomain
             BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                           +h++ ++F+epv+ + l ++dY+ iik+PmdL tik+rl +++Y+sp ef++Dvrl+f+Na++yn+++++v
  PGSC0003DMT400039787 377 KHKHGWVFNEPVNVEgLGLHDYHAIIKHPMDLGTIKARLSQNQYKSPREFAEDVRLVFRNAMTYNPKGHDV 447
                           799*****************************************************************998 PP
Protein Sequence
(Fasta)		MASHADDLKS RERLRWGSPT KVYTRKRRRI QKKDDPIPIS AAPDVNKGSS KDANGYVVQA 60
GELESAEESE RLQYRQEEEE PQLKDSLPCD LELEDGRDRD QVELINGGQG QDDTLGSQGD 120
LDGREVANVG GSPIVEANNG GDVRGEEAAM ASYTDGLTRE HAELDSTVKP VISRVRDRIR 180
INIGGATSRA EIRGIRRDLA GELDQIRSLV TELEAKELQL TTHDTNTNGG FNNVGRITAI 240
PNGAVNSSQP RHIDNGVMNS RALVRVNSEM GLVGHPGSRP FQRPRVAVVE NNNVVAEFVE 300
KEKRTPKANQ YYTNSEFLLG KDRLPPESNK KFKPNGAGRK HNGELEKGYP FGVGFGFDKH 360
RNQVFKRCTT LLQRLMKHKH GWVFNEPVNV EGLGLHDYHA IIKHPMDLGT IKARLSQNQY 420
KSPREFAEDV RLVFRNAMTY NPKGHDVHVM SEQLLKIFEE RWAVIEGEFN PDWRYQMYHD 480
AGLPTPTSRK VPQPSPFARA SVTSHAAPPA SQARTLDRSE SMTGPADFRF KPSRVAHVGR 540
VPVPKKPKAN DPDKRDMTYE EKQRLSTHLQ SLPLEKLDAV VQIIKKRNST FYQHDDVIEV 600
DIDSVDAESL WELERFVTNY KKNLSKQKRK TELAQQARGT TRTAPVMNSA PMVAGALNSN 660
TEAGRQMDNA SSSSSSSSSS SDSGSSSSDS DSDSSSGSGS EAAR 704
Nucleotide Sequence
(Fasta)		GTTTGAACTA GGGTTTCGGA ATATTGTTGT TACGATTCAT GGGGTTCTGA GGAACCCTAG 60
TTTTTGTTTA TGGTTGAAGA TGTTGTTATG GTGATTTTGG TGGATTTTTT TCAGGTTTCT 120
GGTGTTATTT GGTTTGATTT CATGTATGGC TTCACATGCC GACGATTTGA AATCTAGAGA 180
AAGGTTAAGG TGGGGAAGCC CTACCAAAGT TTATACCCGG AAGCGTAGAA GGATCCAAAA 240
GAAGGATGAC CCGATTCCGA TCTCCGCTGC GCCGGATGTC AACAAGGGGA GCAGCAAGGA 300
TGCGAATGGT TATGTTGTAC AGGCTGGGGA ATTGGAATCT GCAGAAGAAT CGGAGCGGTT 360
GCAGTATCGT CAGGAGGAGG AAGAACCTCA ATTGAAAGAT TCTTTGCCGT GTGATTTGGA 420
ATTGGAAGAT GGGAGGGATA GGGATCAGGT AGAATTGATA AATGGTGGAC AAGGGCAGGA 480
TGATACCCTT GGATCACAGG GAGATTTAGA TGGTAGAGAA GTGGCTAACG TTGGTGGCAG 540
CCCAATTGTG GAGGCTAATA ATGGTGGGGA TGTTCGGGGT GAAGAGGCTG CTATGGCGAG 600
TTATACAGAT GGATTAACTA GAGAGCATGC TGAGCTGGAT TCGACAGTTA AGCCTGTAAT 660
TTCTAGGGTT CGAGATAGAA TTAGGATTAA TATAGGGGGA GCGACATCAA GAGCGGAGAT 720
TAGAGGTATT AGGAGGGACT TAGCGGGTGA GCTTGATCAG ATTAGGAGTT TAGTTACAGA 780
GCTTGAAGCT AAGGAGCTTC AGCTGACCAC ACATGATACA AATACTAATG GTGGTTTTAA 840
TAATGTTGGT AGGATAACCG CTATTCCTAA TGGTGCTGTT AATTCTAGTC AACCACGACA 900
TATCGATAAT GGTGTGATGA ATAGTAGGGC TTTAGTGCGA GTGAATTCAG AGATGGGTTT 960
GGTGGGGCAC CCTGGATCGA GACCATTCCA GCGACCAAGG GTTGCAGTTG TGGAAAACAA 1020
TAATGTAGTT GCTGAGTTTG TGGAGAAGGA GAAGAGGACT CCGAAGGCCA ATCAGTATTA 1080
CACTAATTCC GAATTCTTAC TTGGGAAGGA TAGATTGCCC CCGGAAAGCA ATAAAAAATT 1140
TAAGCCAAAT GGTGCTGGGA GGAAACACAA TGGTGAGTTG GAGAAGGGGT ATCCATTTGG 1200
CGTTGGCTTT GGCTTTGATA AACATAGGAA TCAGGTGTTT AAGAGATGCA CCACCCTGCT 1260
TCAGAGGTTA ATGAAGCACA AGCATGGGTG GGTATTTAAT GAGCCAGTGA ACGTGGAGGG 1320
TCTTGGGCTG CATGATTATC ATGCTATCAT CAAGCATCCT ATGGATTTGG GCACTATCAA 1380
AGCTAGGTTA TCTCAAAATC AGTACAAGTC TCCCAGGGAG TTTGCTGAGG ATGTGAGACT 1440
TGTCTTCCGT AATGCCATGA CTTATAATCC CAAAGGACAT GATGTTCATG TTATGTCGGA 1500
ACAGTTGTTA AAGATTTTTG AAGAGAGGTG GGCAGTTATA GAGGGCGAGT TTAATCCGGA 1560
TTGGAGGTAT CAAATGTATC ATGATGCAGG TTTGCCTACC CCAACTTCAA GAAAGGTCCC 1620
TCAGCCTTCT CCCTTTGCCC GTGCTTCTGT AACTTCTCAT GCCGCTCCAC CTGCTTCTCA 1680
AGCAAGGACT TTGGATAGGT CTGAGTCAAT GACTGGACCA GCTGATTTCA GGTTCAAGCC 1740
ATCACGCGTT GCTCATGTTG GTAGGGTACC AGTTCCTAAG AAACCTAAAG CAAATGATCC 1800
CGATAAAAGG GATATGACCT ATGAAGAAAA ACAGAGACTC AGCACACATC TTCAGAGTTT 1860
ACCTTTAGAA AAGCTTGATG CTGTTGTTCA GATTATTAAG AAGAGGAACT CAACATTCTA 1920
TCAACATGAT GATGTGATTG AAGTAGACAT AGACAGTGTT GATGCGGAAA GCCTCTGGGA 1980
GCTTGAAAGG TTTGTGACCA ATTACAAAAA GAACTTAAGC AAGCAGAAGA GAAAGACTGA 2040
ACTTGCTCAG CAAGCCAGAG GAACTACACG GACTGCCCCA GTCATGAATT CTGCTCCTAT 2100
GGTTGCTGGT GCACTGAACA GTAATACTGA AGCAGGAAGA CAGATGGATA ATGCAAGCAG 2160
TTCCAGTAGT TCAAGCAGTT CCAGCAGCGA TTCGGGTTCA TCGTCAAGTG ATTCTGATAG 2220
TGATAGTTCC TCTGGATCCG GATCTGAAGC GGCCCGTTGA TGCGAAAGGC CACTTAGCGC 2280
AGGAATTCTT CATGGATGTC TTTAGCTGTG TACTCATCTG AAGGTTCCAA GATGAAGGTC 2340
CTCTTCTGGT TGAAGGACGT CTGCAATCAA GAACTTCAAG TTTTATCATC GAAGAGATAA 2400
GTGATTTTGG AAGAGTCAGA CATCTCATTC TTAACATTAT TTATGATGTT ATTTCTATAC 2460
AAGTGTTATT GGTTATGGTA GTCATGCGAG TGATGTAGCA CCTGTAAATT GCTTCACCAG 2520
TTTTGCTTAT ACATGTGCTG GGATTTTCAT TCATAGCATT GCACACAGTT AGAGCAGCTA 2580
GGTTTGCTTT GTGCGATGTC CTGCAGCTGG ACTTGGTTGT AGTTGTAGAA ACCAAGTATG 2640
ATGGTAGGAA TGCATATTGT AAAAATTATT AGGGATCTTA AGTGGAAATG ATAATGGAGG 2700
TGTGTACATA TTTTCCCATT CATCTTCCGG GCAACTTTTT GCAAAAAATT TATATGTATT 2760
TTCCCCTGAA GTAGACGCAA TCAGGATTGA ACGTCAGTTA AGCTCTCATT ATGTCCGAAA 2820
ATGCTACTGT GTATGTTGGT CTTTTGACTT GGAATTAATA GAATGAATCC TGAGGGATCT 2880
TGGTTGATTT TTCTG 2896
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0141 Solyc12g014170.1.1 Solanum lycopersicum 89 0.0 1156
WERAM-Pot-0170 POPTR_0019s12050.1 Populus trichocarpa 54 4e-125 446
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 54 9e-125 445
WERAM-Thc-0011 EOX94205 Theobroma cacao 53 1e-122 437
WERAM-Prp-0041 EMJ12560 Prunus persica 55 2e-119 427
WERAM-Glm-0172 GLYMA13G36821.1 Glycine max 56 5e-116 416
WERAM-Amt-0025 ERN13953 Amborella trichopoda 50 5e-114 409
WERAM-Met-0054 KEH39252 Medicago truncatula 49 6e-112 402
WERAM-Brr-0152 Bra030643.1-P Brassica rapa 46 4e-96 350
WERAM-Bro-0142 Bo8g006010.1 Brassica oleracea 44 3e-95 347
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 49 2e-93 341
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 48 8e-92 335
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 53 9e-83 305
WERAM-Sob-0069 Sb04g009080.1 Sorghum bicolor 46 5e-82 303
WERAM-Sei-0067 Si016554m Setaria italica 45 6e-82 302
WERAM-Zem-0006 GRMZM2G004741_P01 Zea mays 44 2e-81 300
WERAM-Lep-0026 LPERR02G09080.1 Leersia perrieri 52 3e-80 296
WERAM-Hov-0110 MLOC_78113.1 Hordeum vulgare 40 3e-79 293
WERAM-Brd-0069 BRADI3G09460.1 Brachypodium distachyon 42 6e-79 293
WERAM-Tra-0252 Traes_6AS_5C6CBFDEF.2 Triticum aestivum 41 1e-78 292
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 50 2e-77 287
WERAM-Aet-0072 EMT26738 Aegilops tauschii 50 8e-77 285
WERAM-Org-0022 ORGLA02G0096900.1 Oryza glaberrima 51 2e-74 277
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 51 3e-74 277
WERAM-Orni-0021 ONIVA02G11900.1 Oryza nivara 51 3e-74 277
WERAM-Orm-0024 OMERI02G11670.1 Oryza meridionalis 51 4e-74 276
WERAM-Orgl-0023 OGLUM02G10650.1 Oryza glumaepatula 51 4e-74 276
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 51 4e-74 276
WERAM-Orr-0021 ORUFI02G10640.1 Oryza rufipogon 51 4e-74 276
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 51 5e-74 276
WERAM-Ori-0024 BGIOSGA007894-PA Oryza indica 51 8e-74 275
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 57 7e-73 272
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 57 3e-72 270
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 45 1e-62 238
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 37 2e-51 201
WERAM-Orn-0042 ENSONIP00000004818.1 Oreochromis niloticus 42 8e-28 123
WERAM-Tar-0179 ENSTRUP00000037735.1 Takifugu rubripes 45 3e-27 120
WERAM-Ten-0035 ENSTNIP00000006103.1 Tetraodon nigroviridis 41 4e-27 120
Created Date 25-Jun-2016