WERAM Information

Tag Content
WERAM ID WERAM-Pot-0106
Ensembl Protein ID POPTR_0009s08350.1
Gene Name POPTR_0009s08350g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0009s08350 POPTR_0009s08350.1 POPTR_0009s08350.1
POPTR_0009s08350 POPTR_0009s08350.2 POPTR_0009s08350.2
POPTR_0009s08350 POPTR_0009s08350.3 POPTR_0009s08350.3
POPTR_0009s08350 POPTR_0009s08350.4 POPTR_0009s08350.4
POPTR_0009s08350 POPTR_0009s08350.5 POPTR_0009s08350.5
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 4.70e-24 85.4 185 256
Organism Populus trichocarpa
Domain Profile
  Ac_Reader Bromodomain
           BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssvq 72 
                         ++++  +F+ pvd   l+++dY+diik+PmdL t+k +l ++ Y+sp +f++Dvrl fnNa++yn+++++v+
  POPTR_0009s08350.1 185 KQKLGYIFNTPVDVVgLQLHDYHDIIKNPMDLGTVKTNLSKNLYESPRDFAADVRLTFNNAMKYNPKGHEVY 256
                         5678889**************************************************************997 PP
Protein Sequence
(Fasta)		MASAVLANRN EPNWTQPQPR GGGAKFMGKI PFSNPNPKFS KKRQFQPPQP PQIPDVDESP 60
SAASDDASSI NRRPQNNHHD FNTGGYVSFN VSSCSKKELI ELKSRLVYEL EKIRELKNRI 120
ESSDFHIGQP SSNFSSKKQT STNKKVSGNK RPFPAPSNFN NFKRSSPDNA QLMKNCSQIL 180
SKLMKQKLGY IFNTPVDVVG LQLHDYHDII KNPMDLGTVK TNLSKNLYES PRDFAADVRL 240
TFNNAMKYNP KGHEVYILAE QFLTRFQDLY RPIKEKVGED VEEEENDLVQ EVQASSWDHI 300
RREPERVSKI DGDFMPVTAK SDPIGQQQQP TGMNQNPNSV RTPSPMRVPQ VKPLKQPKPK 360
AKDPNKREMN LEEKHKLGVG LQSLPQEKME QVVQIIRKRN GHLRQEGDEI ELDIEAVDTE 420
TLWELDRFVT NYKKMVSKIK RQALMGINTN AGATAISEGN NKDVPGNDRM EVVNEAKKPK 480
KGDVGDEDVD IGDEMPMSSF PPVEIEKDNG HASSSSSSSS SSSDDSSSSS DSDSGSSSGS 540
DSEDAHS 547
Nucleotide Sequence
(Fasta)		CTCTAAATCA ATCCTTCAGA AACCCTAACT CTTCACGTTT ATTAGAATTT TTTTTTGGTT 60
TCCAATTATA TTTTTATTGC GCGTGGAGGT TAAAATCCCG GCAACGCGTG TAACTCACGC 120
CCACTTGATT CATGTTAATT TCTCACCGGA GATCTACCGG AATCGAACCG GATTCATGGC 180
GTCAGCTGTG TTAGCGAACC GGAACGAACC GAATTGGACG CAGCCACAGC CACGTGGTGG 240
TGGAGCTAAA TTCATGGGCA AAATCCCTTT CTCCAACCCT AACCCTAAGT TCTCCAAAAA 300
ACGCCAATTT CAGCCACCTC AACCACCACA AATCCCTGAC GTCGATGAAT CTCCTTCAGC 360
CGCTTCAGAT GACGCGTCGT CTATCAACCG CCGTCCACAG AACAATCACC ACGATTTCAA 420
CACCGGAGGA TACGTGTCGT TCAATGTTAG CTCGTGTTCT AAGAAAGAAC TAATCGAGCT 480
AAAAAGTCGA TTAGTTTACG AGCTTGAAAA GATCCGAGAG TTGAAAAACA GAATCGAATC 540
CTCTGATTTC CACATCGGAC AACCCAGCTC CAACTTCAGT AGCAAAAAGC AAACCTCTAC 600
AAACAAGAAA GTATCCGGCA ACAAGCGGCC GTTTCCGGCC CCTTCAAATT TTAACAATTT 660
TAAGCGATCA AGTCCAGATA ATGCGCAATT GATGAAGAAT TGCAGTCAAA TTCTGTCGAA 720
ATTGATGAAG CAAAAATTAG GGTATATTTT TAATACTCCA GTAGATGTTG TGGGTTTGCA 780
ATTGCATGAT TACCATGATA TAATCAAGAA TCCGATGGAT TTGGGTACGG TGAAGACAAA 840
TTTGAGCAAG AATTTGTATG AATCGCCAAG GGATTTCGCT GCTGATGTTA GATTGACATT 900
TAATAATGCC ATGAAGTATA ACCCTAAGGG TCATGAAGTT TATATTCTTG CCGAACAGTT 960
TCTGACAAGA TTTCAGGATT TGTATAGGCC GATTAAGGAG AAGGTGGGTG AGGATGTTGA 1020
AGAGGAGGAG AATGATCTAG TTCAAGAAGT GCAAGCGAGT TCTTGGGATC ATATTAGAAG 1080
AGAGCCAGAG AGGGTTAGTA AAATTGATGG TGATTTTATG CCAGTTACAG CGAAATCTGA 1140
TCCAATTGGC CAGCAGCAGC AGCCAACCGG GATGAATCAA AACCCTAATT CCGTGAGGAC 1200
GCCATCACCA ATGAGGGTGC CGCAAGTGAA GCCATTGAAG CAACCAAAGC CGAAAGCAAA 1260
GGATCCAAAT AAGCGAGAGA TGAATCTTGA AGAGAAGCAC AAGCTAGGTG TTGGTTTGCA 1320
GAGTCTGCCA CAAGAGAAAA TGGAGCAAGT TGTGCAGATT ATTAGGAAGA GGAATGGGCA 1380
TTTGAGGCAA GAGGGTGATG AGATCGAGCT TGATATAGAG GCTGTTGATA CAGAGACATT 1440
ATGGGAGTTG GATCGGTTTG TGACTAATTA CAAGAAGATG GTTAGCAAGA TTAAGCGGCA 1500
AGCTTTGATG GGTATTAACA CAAATGCGGG CGCTACTGCT ATCAGTGAAG GCAATAATAA 1560
GGATGTACCT GGAAATGATA GAATGGAGGT GGTAAATGAG GCGAAGAAGC CGAAGAAAGG 1620
GGATGTTGGG GATGAAGATG TTGACATTGG CGATGAGATG CCAATGAGTA GTTTCCCACC 1680
AGTGGAGATT GAGAAAGACA ATGGACATGC AAGTAGCAGT TCCAGTAGCT CCAGTAGTTC 1740
GAGTGATGAT TCTTCATCTT CAAGTGATTC TGATTCAGGG AGTTCTTCAG GGAGTGATTC 1800
AGAGGATGCA CATTCATGAT GATATCTTAT TGGAGTTGAA TGAATTCTGG ATTGCTTTAA 1860
AGCCTTCCAG GTGTCTCTTT GAAGTGCCTT GAAATGGGTT GTGGTTGAGG GAACAATTGT 1920
GTTGGGTTGC GTCTTAGGAG AGGTAAATTT GATGGAGTTG GGAGTGGCTT TGCATTGGCT 1980
GGGGACTGAA AGCGTTTGCA ATTTGTGTAA AAAGATGAAG GAAATAGTAG AAATCAAGGT 2040
TGTAGGCTAG GATGGTAGGA AAAGCAGTGA AAAAGTAGAA TAGATGGTTA GAGAGGTGGT 2100
TGAATCACTT TTGTACACAT TACAACACCT AATACATGGA TTTTTATTAT CTTCTGTAAA 2160
AATGCCCTCT TCTTCCTCTT GGTTTTTACC ATTGAACTAC TGATGAACCA TGAATAAGCA 2220
AGCAGCCTCC TTTCCCAAGA TATTAAGCAT TTTGTACAAG CAAGCAAGAG GGATCTCCAG 2280
CGGAGGCAAA AGAGTGCATC ACCAGCTCCT CCTATATTAA AGTGTTGCAC ACTAGGGATC 2340
TCGGAAAGTG AGTAGTAAGT ACTTTCTTTC TTTCCTTGAC AGGAAAGATT GGAAGCAAAG 2400
CAAATATCCC ATCTCTCTCT CTCTCT 2427
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0024 EOX98601 Theobroma cacao 61 4e-140 495
WERAM-Glm-0189 GLYMA15G06570.1 Glycine max 59 9e-135 478
WERAM-Viv-0014 VIT_03s0097g00570.t01 Vitis vinifera 56 5e-124 442
WERAM-Met-0110 AES90546 Medicago truncatula 55 6e-119 425
WERAM-Sol-0021 Solyc01g106280.2.1 Solanum lycopersicum 49 2e-102 370
WERAM-Sot-0009 PGSC0003DMT400008039 Solanum tuberosum 49 2e-102 370
WERAM-Mua-0050 GSMUA_Achr3P00480_001 Musa acuminata 44 9e-86 315
WERAM-Amt-0058 ERN18099 Amborella trichopoda 42 5e-78 289
WERAM-Prp-0054 EMJ01899 Prunus persica 55 9e-72 268
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 41 2e-58 224
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 38 5e-58 223
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 42 8e-57 219
WERAM-Sei-0009 Si001167m Setaria italica 39 2e-56 217
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 42 6e-56 216
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 44 2e-55 214
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 46 6e-55 213
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 39 6e-55 212
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 41 8e-55 212
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 41 1e-54 211
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 40 1e-54 211
WERAM-Zem-0093 GRMZM2G167718_P01 Zea mays 42 2e-54 210
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 44 4e-54 209
WERAM-Brr-0041 Bra008074.1-P Brassica rapa 36 9e-53 205
WERAM-Aet-0058 EMT09500 Aegilops tauschii 44 2e-51 201
WERAM-Bro-0148 Bo8g067470.1 Brassica oleracea 36 2e-51 200
WERAM-Tra-0278 Traes_6DS_6D2C07E0F.2 Triticum aestivum 45 3e-51 200
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 45 1e-50 198
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 46 1e-50 198
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 46 2e-50 197
WERAM-Ors-0080 OS08T0192800-01 Oryza sativa 35 2e-50 197
WERAM-Sob-0100 Sb07g005500.1 Sorghum bicolor 35 9e-50 195
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 41 1e-47 188
WERAM-Arl-0151 scaffold_803299.1 Arabidopsis lyrata 46 6e-46 182
WERAM-Art-0152 AT5G65630.1 Arabidopsis thaliana 46 3e-45 180
WERAM-Sem-0092 EFJ05740 Selaginella moellendorffii 32 9e-37 152
WERAM-Paa-0051 ENSPANP00000003567.1 Papio anubis 31 1e-25 115
Created Date 25-Jun-2016