WERAM Information

Tag Content
WERAM ID WERAM-Brr-0041
Ensembl Protein ID Bra008074.1-P
Gene Name GTE3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra008074 Bra008074.1 Bra008074.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 3.90e-22 79.1 99 169
Organism Brassica rapa
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                    +h++ ++F+ pvd+    ++dY++i+k+PmdL t+k rl +  Y+sp+ef++Dvrl fnNa  yn+ +++v
  Bra008074.1-P  99 KHKFGWIFNTPVDAVkSGLHDYHTIVKKPMDLGTVKTRLSKSWYESPLEFADDVRLTFNNALLYNPVGHDV 169
                    799**************************************************************999887 PP
Protein Sequence
(Fasta)		MASGALVSKA KHKRSEISNK RLKPTTAVRP VSPSHSEMRK ITLNSISKLQ VRDLKRKLTA 60
ELEKVRSLIN RLEPVPNKGG QGKAQILKSC NSLLTKLMKH KFGWIFNTPV DAVKSGLHDY 120
HTIVKKPMDL GTVKTRLSKS WYESPLEFAD DVRLTFNNAL LYNPVGHDVH RMAQFLLNMF 180
EDKWAPLETQ CASLYNTHHY VEPLPLQAPP PVVVENRTLE RAESMTNPVE PLALTVSPEK 240
CEEEEASGNR DLTFEEKRRL SEDLQDLPFD KLEEVVEIIK KTKPELAQQD DEIELDIDSL 300
DLQTLWELYR FVIGYKESLS NKKEEQRLGS ERDVESVQEP NTLVTGPEST KVTELGHVAS 360
PAQQVNAGVS SSSSSGSGSS SDSDSDSSGH GS 392
Nucleotide Sequence
(Fasta)		ATGGCGTCTG GTGCTCTAGT TTCGAAGGCG AAGCATAAAC GGAGCGAAAT TAGCAACAAA 60
AGATTGAAAC CCACGACGGC GGTGAGGCCG GTGTCTCCGT CGCATTCGGA GATGAGGAAG 120
ATAACTCTCA ACTCAATCTC AAAGCTTCAA GTCAGAGACT TGAAGCGGAA ACTAACAGCT 180
GAGCTCGAAA AAGTCAGAAG CTTGATCAAC CGCCTCGAAC CTGTCCCCAA CAAGGGAGGA 240
CAAGGTAAAG CTCAGATCTT GAAGAGCTGT AATAGCTTGC TTACCAAGTT AATGAAGCAT 300
AAGTTTGGGT GGATTTTCAA CACCCCGGTT GATGCGGTTA AGTCCGGTTT ACATGATTAT 360
CACACTATAG TTAAGAAGCC TATGGATTTA GGGACTGTCA AGACTAGGTT GAGTAAGAGT 420
TGGTATGAGT CTCCCTTGGA GTTTGCTGAC GATGTGAGAC TTACTTTCAA CAATGCGTTG 480
CTGTATAACC CCGTGGGGCA TGATGTGCAT CGTATGGCTC AGTTTTTGTT GAACATGTTT 540
GAGGACAAGT GGGCCCCGCT TGAAACACAG TGTGCCTCTC TTTACAACAC TCATCATTAT 600
GTGGAGCCAT TACCGTTACA AGCTCCTCCT CCTGTAGTGG TTGAAAATAG GACTTTGGAG 660
AGAGCTGAAT CTATGACAAA CCCAGTGGAG CCTTTAGCTC TAACCGTTTC CCCTGAGAAG 720
TGTGAAGAAG AGGAGGCGTC TGGGAATAGA GACTTGACGT TTGAGGAGAA GCGGAGGCTT 780
AGTGAAGACC TTCAGGATTT GCCTTTCGAC AAGCTAGAGG AAGTTGTTGA GATTATAAAG 840
AAGACTAAGC CGGAGCTCGC TCAACAAGAC GACGAGATTG AGTTAGATAT TGATAGTCTC 900
GACCTCCAAA CGCTTTGGGA GCTTTACAGA TTCGTGATAG GATATAAAGA GAGCTTGAGC 960
AATAAAAAGG AAGAACAGAG ATTGGGATCA GAAAGAGATG TTGAGTCTGT CCAAGAACCG 1020
AACACTCTAG TAACTGGACC TGAATCGACA AAAGTTACAG AACTAGGCCA TGTGGCATCT 1080
CCAGCTCAGC AAGTAAATGC TGGTGTATCA AGTAGTTCTA GTAGTGGATC AGGCTCTTCT 1140
AGTGATTCTG ACAGTGATAG CTCAGGGCAT GGATCTTGA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0033 fgenesh1_pm.C_scaffold_2001298 Arabidopsis lyrata 66 5e-126 448
WERAM-Art-0028 AT1G73150.1 Arabidopsis thaliana 63 4e-117 418
WERAM-Bro-0033 Bo2g079350.1 Brassica oleracea 69 4e-112 402
WERAM-Mua-0024 GSMUA_Achr11P12260_001 Musa acuminata 49 1e-60 231
WERAM-Prp-0041 EMJ12560 Prunus persica 46 6e-58 222
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 42 7e-58 221
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 45 1e-57 221
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 42 1e-57 220
WERAM-Thc-0085 EOY13187 Theobroma cacao 48 2e-57 220
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 49 2e-57 220
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 43 2e-57 220
WERAM-Amt-0025 ERN13953 Amborella trichopoda 44 7e-57 218
WERAM-Met-0054 KEH39252 Medicago truncatula 45 1e-56 218
WERAM-Sei-0009 Si001167m Setaria italica 41 1e-56 218
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 44 8e-56 215
WERAM-Zem-0130 GRMZM2G400907_P01 Zea mays 49 3e-55 213
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 44 9e-55 211
WERAM-Sot-0105 PGSC0003DMT400032373 Solanum tuberosum 45 1e-54 211
WERAM-Sol-0141 Solyc12g014170.1.1 Solanum lycopersicum 44 4e-54 209
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 49 4e-54 209
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 51 4e-54 209
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 51 5e-54 209
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 51 7e-54 208
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 48 3e-53 206
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 51 3e-53 206
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 51 4e-53 206
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 51 4e-53 206
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 50 2e-52 203
WERAM-Aet-0058 EMT09500 Aegilops tauschii 50 2e-51 200
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 46 3e-51 199
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 42 3e-49 192
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 43 6e-49 192
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 42 7e-49 191
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 43 8e-48 188
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 41 9e-41 165
Created Date 25-Jun-2016