WERAM Information

Tag Content
WERAM ID WERAM-Arl-0033
Ensembl Protein ID fgenesh1_pm.C_scaffold_2001298
Gene Name GTE3
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh1_pm.C_scaffold_2001298 fgenesh1_pm.C_scaffold_2001298 fgenesh1_pm.C_scaffold_2001298
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 3.20e-23 82.3 127 197
Organism Arabidopsis lyrata
Domain Profile
  Ac_Reader Bromodomain
                       BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                                     +h+  ++F+ pvd+  l ++dY++i+++PmdL t+k rl +  Y+sp+ef++Dvrl fnNa+ yn+ +++v
  fgenesh1_pm.C_scaffold_2001298 127 KHKSGWVFNTPVDAVrLGLHDYHTIVEKPMDLGTVKTRLSKSWYKSPLEFAEDVRLTFNNAMLYNPVGHDV 197
                                     7999*************************************************************999887 PP
Protein Sequence
(Fasta)		MASGHIAGGG VSKTKHKWSD SGNKSQKRSK PTMAKSNSLG SEDNHQMMKI SLSSISKLEV 60
RNLKRKLQAE LEEVRSLIKR LEPQAPVPNK KLKTANGGKK SGVHGAGDKG TVQILKSCNN 120
LLTKLMKHKS GWVFNTPVDA VRLGLHDYHT IVEKPMDLGT VKTRLSKSWY KSPLEFAEDV 180
RLTFNNAMLY NPVGHDVHHM AEFLLNLFEE KWAPLETQYG LLNRKQQPVR DIDLHAPVST 240
NTHNIEPFPL PPPPPPTVVE NRTLERAESI TNPVKPAVLP VVPEKPVEEA SADRDLTFDE 300
KRRLSEDLQD LPYDKLEAVV QIIKKSNPEL SQQDDEIELD IDSLDLETLW ELYRFVTEYK 360
ERSSKKKEEH GLDSERDAES FHNSVQEPNT LVTGLESSKV TELGHVASPV RQEVNVGGSS 420
SSNSSSSGSG SGSSDSDSDS SGHGSDIGN 449
Nucleotide Sequence
(Fasta)		ATGGCGTCTG GTCATATAGC CGGTGGTGGA GTTTCGAAGA CGAAGCATAA ATGGAGTGAT 60
AGTGGCAACA AAAGCCAAAA ACGATCGAAG CCCACGATGG CGAAGTCGAA TTCGCTTGGG 120
TCGGAAGATA ATCATCAGAT GATGAAGATA AGTTTGAGCT CAATTTCGAA ACTTGAAGTT 180
AGGAACTTGA AGCGGAAACT ACAAGCTGAG CTTGAAGAAG TTAGAAGCTT GATCAAGCGA 240
CTCGAACCAC AAGCTCCCGT GCCGAACAAG AAGCTGAAAA CAGCAAACGG TGGTAAGAAG 300
AGTGGAGTAC ATGGAGCTGG TGATAAAGGT ACCGTTCAGA TTTTGAAGAG CTGCAACAAT 360
TTGCTTACGA AATTAATGAA GCATAAGTCT GGATGGGTTT TCAATACTCC AGTTGATGCA 420
GTTAGGCTTG GTTTACATGA TTATCACACT ATTGTTGAGA AGCCTATGGA TCTAGGAACA 480
GTGAAGACGA GGTTGAGTAA GAGTTGGTAT AAGTCACCAT TGGAGTTTGC TGAGGATGTG 540
AGACTTACTT TTAACAATGC AATGCTGTAT AATCCCGTGG GGCATGATGT GCATCATATG 600
GCTGAGTTTT TGTTGAATCT GTTTGAAGAG AAATGGGCGC CTCTTGAAAC GCAGTATGGA 660
TTACTTAATA GGAAGCAACA ACCAGTCCGT GATATCGATC TCCATGCTCC TGTTTCAACA 720
AACACTCATA ACATAGAGCC ATTTCCGTTA CCTCCTCCTC CTCCTCCTAC GGTAGTTGAA 780
AATAGGACTT TGGAGAGAGC AGAATCTATT ACAAACCCAG TGAAACCTGC AGTTCTACCG 840
GTTGTCCCTG AGAAGCCTGT AGAAGAGGCG TCTGCAGACA GGGACTTGAC GTTTGATGAG 900
AAGCGGAGAC TTAGTGAAGA CCTTCAGGAT TTACCTTATG ACAAGCTAGA GGCAGTTGTG 960
CAGATTATAA AGAAGAGTAA TCCAGAACTC TCTCAACAAG ATGATGAGAT TGAGTTAGAT 1020
ATTGATAGTC TTGATCTGGA AACTCTTTGG GAGCTTTACA GATTCGTGAC TGAATATAAG 1080
GAGCGCTCGA GCAAGAAAAA AGAGGAACAT GGATTAGACT CAGAAAGAGA TGCTGAATCT 1140
TTTCACAATA GTGTGCAAGA ACCGAACACA CTAGTAACTG GCCTTGAATC GTCAAAAGTT 1200
ACTGAATTAG GTCATGTGGC ATCTCCTGTT CGACAAGAAG TAAATGTTGG AGGATCAAGT 1260
AGTTCTAACA GTTCTAGTAG TGGCTCAGGC TCGGGTTCTA GTGATTCTGA CAGTGATAGC 1320
TCAGGGCATG GATCTGATAT CGGTAATTAA 1351
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0028 AT1G73150.1 Arabidopsis thaliana 88 0.0 633
WERAM-Brr-0041 Bra008074.1-P Brassica rapa 65 9e-116 414
WERAM-Bro-0148 Bo8g067470.1 Brassica oleracea 60 3e-111 399
WERAM-Thc-0085 EOY13187 Theobroma cacao 51 2e-63 240
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 42 4e-60 229
WERAM-Prp-0055 EMJ15030 Prunus persica 50 3e-58 223
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 44 3e-57 219
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 43 4e-57 219
WERAM-Sot-0105 PGSC0003DMT400032373 Solanum tuberosum 49 6e-57 219
WERAM-Glm-0172 GLYMA13G36821.1 Glycine max 54 7e-57 218
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 44 9e-57 218
WERAM-Sei-0009 Si001167m Setaria italica 44 3e-56 216
WERAM-Sol-0098 Solyc07g062660.2.1 Solanum lycopersicum 49 3e-56 216
WERAM-Met-0055 KEH39253 Medicago truncatula 48 7e-56 215
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 49 1e-55 214
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 46 2e-55 213
WERAM-Amt-0025 ERN13953 Amborella trichopoda 46 3e-55 213
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 47 1e-54 211
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 47 3e-53 206
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 47 7e-53 205
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 47 1e-52 204
WERAM-Zem-0130 GRMZM2G400907_P01 Zea mays 47 2e-52 204
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 47 5e-52 202
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 47 6e-52 202
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 46 6e-52 202
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 46 9e-52 201
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 52 1e-51 201
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 51 7e-51 199
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 46 1e-50 198
WERAM-Aet-0058 EMT09500 Aegilops tauschii 50 4e-46 183
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 54 4e-46 182
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 45 9e-46 181
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 45 9e-46 181
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 44 3e-44 176
WERAM-Sem-0092 EFJ05740 Selaginella moellendorffii 38 1e-40 164
Created Date 25-Jun-2016