WERAM Information

Tag Content
WERAM ID WERAM-Bro-0148
Ensembl Protein ID Bo8g067470.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo8g067470 Bo8g067470.1 Bo8g067470.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 6.10e-23 82.2 116 186
Organism Brassica oleracea
Domain Profile
  Ac_Reader Bromodomain
     BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                   +h++ ++F+ pvd++ l ++dY+ i+kePmdL t+k++l +g Y+sp++f++Dvrl fnNa  yn+ +++v
  Bo8g067470.1 116 KHKDGWVFNVPVDAKvLGLHDYHSIVKEPMDLGTVKAKLGSGLYESPLDFAEDVRLTFNNAILYNPVGHEV 186
                   89***************************************************************998886 PP
Protein Sequence
(Fasta)		MSSDHGGGGA SKKKSHHKLP QNRSKPMAAP RPNRSVPLPS EDDDDYPMLK VSLSSISKLE 60
VRNLKRKLTA ELDQVRSLMT RFDPQPQSKK TKQTGNKKGN AQILKSCNAL LTKLMKHKDG 120
WVFNVPVDAK VLGLHDYHSI VKEPMDLGTV KAKLGSGLYE SPLDFAEDVR LTFNNAILYN 180
PVGHEVHSMA KFLLNMFEEK WVSIEVQFDN LHRKVKPTRD IALFSPPVAP VVEAVRSPPL 240
LPPAVIEDRT LERAESMPTP VEPETVTTSA LEKPEEEEEE EAPVDVRDLT MDEKRRLSEE 300
LQDLPYDKLE TVVQIIKKSN PELSQQDDEI ELDIDSVDIQ TLWELYRFVI GYKEGLSNKK 360
EDQGFGSERD AESVHNSIQE PTTLATGTET SRANESGKAI RMSSPGRQEN NAGGSSSSNS 420
SSSDTGSGSS DSDSDSSSGR GSDTGN 446
Nucleotide Sequence
(Fasta)		ATGTCTTCTG ATCACGGAGG TGGAGGCGCT TCGAAGAAGA AGAGCCACCA CAAGCTTCCC 60
CAGAACCGAT CCAAACCAAT GGCGGCCCCC AGACCCAACC GATCGGTCCC ACTCCCCTCG 120
GAGGACGACG ACGACTACCC CATGCTCAAG GTCAGCTTGA GCTCAATCTC CAAGCTCGAA 180
GTTCGGAACT TGAAACGGAA ACTAACGGCC GAGCTAGACC AAGTCAGGAG CTTGATGACG 240
CGGTTCGATC CCCAACCTCA GAGCAAGAAG ACGAAACAAA CAGGTAACAA GAAAGGTAAT 300
GCTCAGATTC TCAAGAGCTG CAACGCTCTG CTTACTAAGC TGATGAAGCA TAAGGATGGG 360
TGGGTGTTTA ATGTTCCCGT GGACGCTAAA GTACTTGGCT TGCATGATTA CCACAGTATT 420
GTTAAGGAGC CTATGGATTT GGGGACGGTG AAGGCTAAGC TAGGGAGTGG TTTGTATGAG 480
TCTCCGCTTG ATTTCGCTGA AGATGTGAGG CTTACTTTTA ATAATGCGAT ATTGTATAAC 540
CCCGTTGGGC ATGAGGTGCA TAGTATGGCT AAGTTTCTGT TGAACATGTT TGAAGAGAAG 600
TGGGTTTCTA TTGAGGTTCA GTTTGATAAT CTTCATAGGA AGGTTAAACC GACTCGCGAC 660
ATTGCGTTGT TCTCTCCTCC TGTTGCTCCT GTTGTGGAGG CGGTACGTTC CCCTCCACTG 720
CTTCCGCCTG CAGTGATTGA GGATAGGACT TTGGAGAGAG CTGAGTCTAT GCCGACGCCT 780
GTGGAGCCTG AGACTGTGAC TACTAGTGCC CTGGAGAAGC CTGAAGAGGA AGAGGAGGAG 840
GAGGCGCCTG TTGATGTTAG GGACCTGACG ATGGATGAGA AGCGGAGACT CAGTGAAGAG 900
CTTCAGGACT TGCCTTATGA CAAACTAGAG ACGGTGGTTC AGATTATCAA GAAGAGTAAT 960
CCGGAACTGT CGCAGCAGGA TGATGAGATT GAGCTGGATA TTGATAGTGT TGACATCCAA 1020
ACGCTTTGGG AGCTTTATAG ATTTGTGATT GGGTATAAGG AGGGGTTGAG CAATAAAAAG 1080
GAGGATCAGG GGTTTGGTTC TGAAAGAGAT GCTGAATCTG TTCACAATAG TATCCAAGAA 1140
CCGACCACTC TAGCAACTGG CACTGAAACA TCAAGAGCTA ATGAATCAGG AAAAGCAATT 1200
CGCATGTCAT CTCCTGGTCG GCAAGAAAAC AACGCAGGTG GATCAAGTAG TTCTAATAGT 1260
TCTAGCAGTG ACACAGGGTC TGGCTCTAGT GATTCTGACA GTGACAGCTC TTCAGGACGC 1320
GGATCAGATA CGGGTAACTA G 1342
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0083 Bra016586.1-P Brassica rapa 94 0.0 657
WERAM-Arl-0031 fgenesh1_pm.C_scaffold_1001524 Arabidopsis lyrata 67 1e-145 513
WERAM-Art-0014 AT1G17790.1 Arabidopsis thaliana 65 2e-141 499
WERAM-Mua-0014 GSMUA_Achr10P27900_001 Musa acuminata 45 3e-71 266
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 48 8e-68 255
WERAM-Zem-0130 GRMZM2G400907_P01 Zea mays 44 1e-66 251
WERAM-Thc-0085 EOY13187 Theobroma cacao 47 1e-66 251
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 45 3e-66 249
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 50 2e-65 246
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 43 4e-65 246
WERAM-Sei-0009 Si001167m Setaria italica 50 9e-65 244
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 50 2e-64 244
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 41 2e-64 243
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 50 2e-64 243
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 41 3e-64 243
WERAM-Sot-0029 PGSC0003DMT400027384 Solanum tuberosum 49 3e-64 243
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 50 4e-64 242
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 50 9e-64 241
WERAM-Prp-0055 EMJ15030 Prunus persica 47 1e-63 241
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 47 1e-63 241
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 50 3e-63 240
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 50 4e-63 239
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 50 4e-63 239
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 49 5e-63 239
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 50 6e-63 239
WERAM-Met-0054 KEH39252 Medicago truncatula 43 1e-62 238
WERAM-Amt-0025 ERN13953 Amborella trichopoda 46 3e-61 233
WERAM-Sol-0141 Solyc12g014170.1.1 Solanum lycopersicum 47 4e-61 233
WERAM-Aet-0058 EMT09500 Aegilops tauschii 46 2e-57 221
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 50 2e-57 220
WERAM-Orb-0001 OBART01G07260.1 Oryza barthii 50 4e-57 219
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 49 7e-57 218
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 42 1e-54 211
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 44 3e-54 209
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 38 4e-47 186
Created Date 25-Jun-2016