WERAM Information

Tag Content
WERAM ID WERAM-Brr-0083
Ensembl Protein ID Bra016586.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra016586 Bra016586.1 Bra016586.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 1.40e-22 80.5 111 181
Organism Brassica rapa
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                    +h++ ++F+ pvd++ l ++dY+ i+kePmdL t+k++l  g Y+sp++f++Dvrl fnNa  yn+ +++v
  Bra016586.1-P 111 KHKDGWVFNVPVDAKgLGLHDYHSIVKEPMDLGTVKAKLGGGLYESPLDFAEDVRLTFNNAILYNPVGHEV 181
                    89***************************************************************998886 PP
Protein Sequence
(Fasta)		MSSDHGGGGA SKKKNHQNRS KPMAGPRPNR SVPLPSEDDD YPMLKVSLSS ISKLEVRNLK 60
RKLTAELDEV RSLMTRFDPQ PQSKKMKQTG NKKGTAQILK SCNALLTKLM KHKDGWVFNV 120
PVDAKGLGLH DYHSIVKEPM DLGTVKAKLG GGLYESPLDF AEDVRLTFNN AILYNPVGHE 180
VHSMAKFLLN MFEEKWVSIE VQFDNLHRKV KPTRDVALFS PPVVEALPAP PPPLLPPAVV 240
EERTLERAEE SMTTPVEPET VTTSALEKPE EEEEEAPVDV RDLTMDEKRR LSEELQDLPY 300
DKLETVVQII KKSNPELSQQ DDEIELDIDS VDIQTLWELY RFVIGYKEGL SNKKEDQGFG 360
SERDAESVHN SIQEPTILAT GTETSRANES GKAIRMSSPG RQENNPGGSS SSNSSSSDTG 420
SGSSDSDSDS SSGRGSDTGN
Nucleotide Sequence
(Fasta)		ATGTCTTCTG ATCACGGAGG TGGAGGAGCT TCGAAGAAGA AGAACCACCA GAACCGATCC 60
AAACCAATGG CGGGCCCCAG ACCCAACCGA TCGGTCCCAC TCCCCTCGGA GGACGACGAC 120
TACCCGATGC TCAAGGTCAG CTTGAGCTCA ATCTCCAAGC TCGAAGTTCG GAACTTGAAA 180
CGGAAACTAA CGGCTGAGCT AGACGAAGTT AGGAGCTTGA TGACGCGGTT CGATCCCCAG 240
CCTCAGAGTA AGAAGATGAA ACAAACAGGT AACAAGAAAG GTACTGCTCA GATTCTCAAG 300
AGCTGCAACG CTCTGCTTAC TAAGCTGATG AAGCATAAGG ATGGGTGGGT GTTTAATGTT 360
CCTGTGGATG CTAAAGGACT CGGCTTGCAT GATTATCATA GTATTGTTAA GGAGCCTATG 420
GATTTGGGGA CTGTGAAGGC TAAGCTAGGA GGTGGTTTGT ATGAGTCTCC GCTTGATTTT 480
GCGGAAGATG TGAGGCTTAC TTTTAATAAT GCGATATTGT ATAACCCTGT TGGGCATGAG 540
GTGCATAGTA TGGCTAAGTT TCTGTTGAAC ATGTTTGAAG AGAAGTGGGT TTCTATTGAG 600
GTTCAGTTTG ATAATCTCCA TAGGAAGGTT AAACCGACTC GCGACGTTGC GTTGTTCTCT 660
CCTCCTGTTG TGGAGGCGTT GCCAGCTCCT CCTCCTCCGC TGCTTCCGCC TGCAGTGGTT 720
GAAGAGAGGA CTTTGGAGAG AGCAGAAGAG TCTATGACGA CGCCTGTGGA GCCTGAAACT 780
GTGACTACTA GTGCCCTCGA GAAGCCTGAA GAGGAGGAAG AGGAGGCGCC TGTTGATGTT 840
AGGGACTTGA CGATGGATGA GAAGCGGAGA CTCAGTGAAG AGCTTCAGGA CTTGCCTTAT 900
GATAAACTAG AGACGGTTGT TCAGATTATC AAGAAGAGTA ATCCGGAGCT CTCTCAGCAA 960
GATGATGAGA TTGAGCTTGA TATTGACAGT GTTGACATCC AAACGCTTTG GGAGCTTTAT 1020
AGATTTGTGA TTGGGTATAA GGAGGGGTTG AGCAATAAAA AGGAGGATCA GGGGTTTGGT 1080
TCGGAGAGAG ATGCTGAATC TGTTCACAAT AGTATCCAAG AACCTACCAT TCTAGCAACT 1140
GGCACTGAAA CATCGAGAGC TAATGAATCA GGAAAAGCAA TTCGCATGTC ATCTCCTGGT 1200
CGGCAAGAAA ACAACCCAGG TGGATCAAGT AGTTCTAATA GTTCTAGCAG TGACACAGGC 1260
TCTGGCTCTA GTGATTCTGA CAGTGACAGC TCCTCCGGAC GTGGATCAGA TACGGGTAAC 1320
TAG 1324
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0148 Bo8g067470.1 Brassica oleracea 93 0.0 694
WERAM-Arl-0031 fgenesh1_pm.C_scaffold_1001524 Arabidopsis lyrata 66 2e-145 513
WERAM-Art-0014 AT1G17790.1 Arabidopsis thaliana 67 1e-143 506
WERAM-Mua-0014 GSMUA_Achr10P27900_001 Musa acuminata 43 5e-70 262
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 42 6e-66 248
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 41 6e-66 248
WERAM-Sei-0009 Si001167m Setaria italica 43 7e-65 245
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 40 8e-65 245
WERAM-Zem-0130 GRMZM2G400907_P01 Zea mays 42 8e-65 244
WERAM-Thc-0085 EOY13187 Theobroma cacao 47 2e-64 243
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 46 8e-64 241
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 44 2e-63 240
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 49 2e-63 240
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 43 3e-63 239
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 49 2e-62 237
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 49 4e-62 236
WERAM-Sot-0029 PGSC0003DMT400027384 Solanum tuberosum 44 5e-62 236
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 46 6e-62 235
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 46 9e-62 234
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 49 1e-61 234
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 47 3e-61 233
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 49 3e-61 233
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 44 4e-61 232
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 49 5e-61 232
WERAM-Prp-0041 EMJ12560 Prunus persica 43 6e-61 232
WERAM-Sol-0141 Solyc12g014170.1.1 Solanum lycopersicum 46 3e-58 223
WERAM-Met-0054 KEH39252 Medicago truncatula 42 4e-58 222
WERAM-Aet-0058 EMT09500 Aegilops tauschii 46 2e-57 220
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 48 1e-56 218
WERAM-Orb-0001 OBART01G07260.1 Oryza barthii 49 9e-55 211
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 49 1e-54 211
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 42 4e-53 206
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 38 2e-45 180
WERAM-Amt-0025 ERN13953 Amborella trichopoda 61 1e-38 158
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 56 2e-33 141
Created Date 25-Jun-2016