WERAM Information

Tag Content
WERAM ID WERAM-Sot-0009
Ensembl Protein ID PGSC0003DMT400008039
Gene Name PGSC0003DMG400003108
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400003108 PGSC0003DMT400008039 PGSC0003DMT400008039
PGSC0003DMG400003108 PGSC0003DMT400008040 PGSC0003DMT400008040
PGSC0003DMG400003108 PGSC0003DMT400008041 PGSC0003DMT400008041
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 5.20e-22 79.1 205 275
Organism Solanum tuberosum
Domain Profile
  Ac_Reader Bromodomain
             BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                           +h+  ++F+ pvd++ l ++dY++iik+PmdL t+k++l ++ Y sp ef++Dvrl fnNa  yn++ ++v
  PGSC0003DMT400008039 205 KHKNGWIFNIPVDAEaLGLHDYHQIIKRPMDLGTVKSNLAKNFYPSPFEFAADVRLTFNNALLYNPKTDQV 275
                           7999**************************************************************99876 PP
Protein Sequence
(Fasta)		MASAVLASRN ESSWAQSGGA GGGFMGKTPF SHTQLNPNHN PNPKKKQKQF HHTSNGRHID 60
ESPAVTQTAS DDAYSFNQRP IESTTNVDGL NFGGYLTFNV VSYNKGEVNE LRSRLLAEVE 120
QIRNLKDRIE SGQLSTTNPR SQGKSKKLSG NKRPTPSGSS KDPKKLPNGV ENRNFGNPVG 180
GGGVKAIGTE SMMKECRQIL AKLMKHKNGW IFNIPVDAEA LGLHDYHQII KRPMDLGTVK 240
SNLAKNFYPS PFEFAADVRL TFNNALLYNP KTDQVNGFAE QLLGRFEDMF RPLQDKMNKL 300
EGGRRDYHPV DELQGSSWNH IPTPERVKKP KATPVPHISK RQERMQNHSS ASTPSLPVPP 360
PNPPARQQSP LSTPSPVRAP PSKPESAAKV PAMGKQPKPR AKDPNKREMN MEEKHKLGVG 420
LQSLPQEKMP QLVQIIRKRN EHLAQDGDEI ELDIEALDTE TLWELDRFVT NWKKMVSKTK 480
RQALMINNLG PPSASAAASA ATTSVAEADG PTTSEKNDSF KKPKKGDVGE EDVEIEDDEP 540
ATHFPPVEIE KDEGGGRDQE NGGGGSSSSS SSSSSSSGSS SSSGICSTSN AKK 593
Nucleotide Sequence
(Fasta)		CCTCGCTCAA TCCCTTCAAA CCCTTGCCTT CATTTGGGTT CCAACATTTA AAGAGTTCCT 60
TTTTTCTTCC TTGTTTGGTT GATTAAAGCC GGAAATTGGA GGTCGGGTGG AGTTTTGTTG 120
GATTCCGGCG GGCGCGTAGC TATCACGTAC CTTTTCAATT TCATGATTTC AACACCATCT 180
GATAACGATA AATTCCACCA GAGAAACGCC GGTATTAAGC CTTGCCGGTA TAATTTATGG 240
CATCCGCCGT CTTAGCTAGC CGGAATGAAT CTAGCTGGGC TCAGTCTGGT GGTGCCGGTG 300
GTGGATTCAT GGGGAAAACC CCTTTTTCTC ATACACAACT GAACCCTAAT CACAACCCTA 360
ACCCTAAGAA GAAGCAGAAG CAATTCCATC ACACCTCTAA TGGTCGGCAT ATTGATGAAT 420
CGCCGGCCGT GACGCAAACA GCGTCTGATG ATGCCTATTC GTTCAATCAA CGGCCGATTG 480
AATCAACGAC CAACGTTGAC GGCCTTAATT TCGGAGGATA TTTGACTTTT AACGTCGTCT 540
CTTACAACAA AGGCGAGGTC AATGAGCTAC GGAGTCGGCT GTTGGCGGAG GTCGAACAGA 600
TCCGAAACCT CAAGGATCGA ATCGAATCCG GTCAATTGAG CACCACCAAC CCCAGATCAC 660
AAGGCAAATC GAAGAAACTA TCTGGAAATA AACGGCCTAC CCCTTCCGGA TCCAGTAAAG 720
ATCCGAAAAA GCTCCCAAAC GGAGTTGAAA ATAGGAATTT TGGTAATCCT GTTGGTGGTG 780
GTGGTGTTAA GGCCATCGGA ACGGAAAGTA TGATGAAGGA ATGTAGGCAG ATTTTGGCAA 840
AGCTGATGAA GCATAAAAAT GGGTGGATTT TCAATATCCC TGTTGATGCT GAAGCCCTGG 900
GTCTTCATGA TTACCACCAA ATTATTAAGC GACCCATGGA TTTGGGGACG GTTAAATCAA 960
ATTTGGCTAA GAATTTTTAC CCTTCCCCTT TTGAATTTGC TGCTGATGTA AGGCTTACTT 1020
TCAATAATGC CTTGTTGTAT AACCCTAAAA CAGATCAAGT TAATGGCTTC GCTGAGCAGC 1080
TTCTCGGACG ATTTGAGGAC ATGTTTAGAC CGCTCCAGGA TAAAATGAAT AAGCTTGAAG 1140
GCGGCAGGAG GGATTATCAT CCTGTAGATG AGTTGCAGGG GAGTTCTTGG AATCACATAC 1200
CTACGCCCGA GAGAGTGAAG AAACCCAAGG CTACTCCAGT CCCTCACATT TCAAAGAGGC 1260
AAGAGCGGAT GCAAAATCAT TCTAGTGCGT CAACACCCTC TTTGCCAGTG CCACCACCCA 1320
ATCCACCAGC CCGGCAGCAG TCCCCATTGT CAACTCCTTC CCCAGTGAGG GCACCACCCT 1380
CGAAGCCTGA ATCAGCTGCT AAAGTTCCTG CTATGGGAAA GCAACCTAAA CCGAGGGCCA 1440
AGGATCCAAA TAAAAGAGAG ATGAATATGG AGGAGAAGCA TAAATTAGGA GTTGGGTTGC 1500
AAAGTTTGCC ACAAGAGAAG ATGCCGCAGT TGGTGCAGAT TATAAGGAAG AGGAATGAAC 1560
ATTTAGCCCA AGACGGTGAC GAGATTGAGC TCGACATTGA GGCCCTTGAC ACCGAGACTC 1620
TATGGGAGCT TGATCGGTTT GTGACCAATT GGAAGAAGAT GGTGAGCAAA ACTAAGAGGC 1680
AGGCATTGAT GATTAACAAT TTGGGACCAC CATCCGCCAG TGCTGCAGCT TCTGCTGCAA 1740
CTACATCCGT CGCCGAAGCA GATGGGCCTA CCACTAGTGA GAAAAATGAT TCCTTCAAAA 1800
AGCCCAAAAA GGGTGATGTT GGAGAAGAGG ATGTAGAGAT AGAGGATGAT GAACCAGCTA 1860
CCCATTTTCC TCCAGTGGAA ATTGAGAAGG ATGAAGGTGG TGGGCGGGAT CAAGAGAATG 1920
GTGGTGGTGG TAGTAGTAGC TCTAGTAGTT CTAGCAGCTC AAGCAGTGGC TCCTCCTCTT 1980
CTAGTGGTAT ATGCTCTACT TCAAATGCGA AAAAATGATA TCTTTTGCGA CTCAAGTAGC 2040
GTAGATTAAT TGAACATAAT TTCTTGTGCA GATTCTGATT CAGGAAGTTC ATCCGGAAGT 2100
GACTCTGATG CTGATGATGC ACACTCTTGA GATTTGTTGA TTCAAGCAGT GCATATGTTG 2160
TTGAATTTTC TTTTATCGAG GTATAAAGTT GGGGACTTGA ATTCTTTTGT TTTGCACATT 2220
CCGGTGAGCT GAGTAATTCG GTTGTTGTAA ACACATGGGC AACCTGACAA GCTAGGAAGA 2280
AAAATTGGTC TGCTTATATC ACTAGGCAAA TCAAAAAGCT CAGTTGGAAG GGGAAGGGAA 2340
CTTGTAGTGT TGATGACAAA AGAAGTTATG GCGTTAGGGA TCACAATTTT AGGAATTTTA 2400
GAGATGGTCC CTCTGTTAAT GAAGAGTGAG ATATGTAGAT AGATAGTTGA GGAGAAGACA 2460
CCTTTTGTAC AGTTGGTTTA CACTAAATAT TTGATTTTTC TTGAAAAGAA CACATGACAC 2520
ATTCTACTTC TTTGGTTTCG AGCTCTATCC AACTTTCTCA AATTGTTTGT GGTACGTACA 2580
TCTTTAAAGG ATATTTTGAG TGAACGTGTT GGTCGGTGAA CAACTTGTGG AGCCACTAAT 2640
TGAGATAACA ACTTGGAGTA AAAAGAAAGA TTATCACTGT GGCTAATGTG TTAAAAATTG 2700
CTGGCCTGCA CTTTGTGTTA GCCATGTCCT AATCGACCCT AAAATGAGCA AAGACTGTTT 2760
ATTCAGCTTC CTATTAAGCC ACGTTGGAAT GGTTTAGTTT GGCCTGAGAG CAGAATATGA 2820
AGAAACAAAA AAGCATATAT GAATTCAACC CTCTTCTTTT GATGGTGAAG ATGTGTTTAC 2880
AGAGAATGGT ATGTGAACAA TTTAGGTGCA ATTATTTTCA TATACTAAAT TTTTTAGGTA 2940
CTTGTAAATT ATTTATTTAA TGGGTGGCCT TGTTCCTTTT GCCTTTTTCA TTCATTTATA 3000
GGTAGGTAGC TCTCAGCTGT GCAGTAACAG TATAATACTT AAAGAAACTT TCCTTTGTAA 3060
AGACGTAAAC AATCTCCTTT CACGTGAAGG ATCCAAATAT GGCGTCTCAA CTAAAATCCA 3120
CCCATGTGAT GGTTATATAT ATTTTTGGGG AAATATACAC AGC 3164
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0021 Solyc01g106280.2.1 Solanum lycopersicum 97 0.0 903
WERAM-Viv-0014 VIT_03s0097g00570.t01 Vitis vinifera 54 1e-136 484
WERAM-Thc-0024 EOX98601 Theobroma cacao 50 3e-117 419
WERAM-Pot-0106 POPTR_0009s08350.1 Populus trichocarpa 50 3e-115 413
WERAM-Glm-0188 GLYMA15G06560.1 Glycine max 49 5e-111 399
WERAM-Met-0110 AES90546 Medicago truncatula 49 2e-107 387
WERAM-Brr-0122 Bra024402.1-P Brassica rapa 46 6e-88 322
WERAM-Arl-0151 scaffold_803299.1 Arabidopsis lyrata 43 2e-83 307
WERAM-Art-0152 AT5G65630.1 Arabidopsis thaliana 43 1e-81 301
WERAM-Amt-0058 ERN18099 Amborella trichopoda 41 6e-80 295
WERAM-Mua-0050 GSMUA_Achr3P00480_001 Musa acuminata 39 1e-74 278
WERAM-Prp-0054 EMJ01899 Prunus persica 45 4e-72 270
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 42 2e-65 248
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 40 2e-62 237
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 40 2e-60 231
WERAM-Sei-0009 Si001167m Setaria italica 39 4e-59 226
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 40 9e-59 225
WERAM-Aet-0058 EMT09500 Aegilops tauschii 46 2e-57 221
WERAM-Bro-0148 Bo8g067470.1 Brassica oleracea 36 4e-56 216
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 41 3e-52 204
WERAM-Zem-0012 GRMZM2G010075_P01 Zea mays 40 6e-52 202
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 41 7e-52 202
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 43 2e-51 201
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 41 9e-50 195
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 53 1e-34 145
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 60 2e-34 144
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 53 3e-34 144
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 53 4e-34 143
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 60 1e-33 142
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 53 2e-33 141
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 53 2e-33 141
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 44 4e-33 140
WERAM-Orb-0046 OBART04G26330.1 Oryza barthii 42 8e-32 135
WERAM-Ors-0045 OS04T0623100-01 Oryza sativa 44 1e-31 135
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 35 3e-28 124
WERAM-Pof-0130 ENSPFOP00000011220.2 Poecilia formosa 39 2e-23 108
Created Date 25-Jun-2016