WERAM Information

Tag Content
WERAM ID WERAM-Art-0078
Ensembl Protein ID AT3G27260.1
Uniprot Accession Q9LK27; GTE8_ARATH; Q8W4J0
Genbank Protein ID NP_189362.1
Protein Name Transcription factor GTE8
Genbank Nucleotide ID NM_113640.1
Gene Name GTE8;At3g27260;K17E12.8
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G27260 AT3G27260.1 AT3G27260.1
AT3G27260 AT3G27260.2 AT3G27260.2
Details
Type Family Domain Substrates AA References (PMIDs)
Ac_Reader Bromodomain Bromodomain K 12466527
Status Reviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 1.60e-25 89.8 189 259
Organism Arabidopsis thaliana
NCBI Taxa ID 3702
Functional Description
(View)
Domain Profile
  Ac_Reader Bromodomain
    BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                  +h++s++F+ pvd   l+ipdY + ik+PmdL t+k++l +g Yssp+ef++Dvrl f+Na++yn+++++v
  AT3G27260.1 189 SHPHSWVFQAPVDVVkLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHEFAADVRLTFTNAMTYNPPGHDV 259
                  799*****************************************************************998 PP
Protein Sequence
(Fasta)		MVESAAFPGG YYRNTFEAPE ESEGSGSSAQ IDTEVTASEN SSTPARKCIM LNSNDEDPYG 60
VQRQVISLYN MSQSERKDLI YRLKLELEQT KIVLKNAELQ RMNPAAVSST SDRVGFSTGQ 120
KISSRVSNSK KPSDFAVGSG KKVRHQNGTS RGWNRGTSGK FESSKETMTS TPNITLMKQC 180
DTLLRKLWSH PHSWVFQAPV DVVKLNIPDY LTTIKHPMDL GTVKKNLASG VYSSPHEFAA 240
DVRLTFTNAM TYNPPGHDVH IMGDILSKLF EARWKTIKKK LPPCSMQTLP AVTLEPNDER 300
KAAISVPPAK KRKMASPVRE SVPEPVKPLM TEVERHRLGR QLESLLDELP AHIIDFLKKH 360
NSNGGEIAED EIEIDIDVLS DEVLVTLRNL LDEYIQNKEA KQTNVEPCEI ELINGSRPSN 420
SSLQRGNEMA DEYVDGNEPP ISRSSSDSDS GSSEDQSDDA KPMVQGDSSK MPETANSEAQ 480
RDENTRIDDL FVGSQSTGAL EQMDICSQQK LSSDESDGQH EGNILETPAS SEKRYRAALL 540
KNRFADIILK AREKPLPQNG IKGDPERLRK EREELVLQKK KEKARLQAEA EAAEDARRQA 600
EAEAAAEAAA EAKRKRELER EAARQALLKM EKTVEINENS RFLEDLEMLS SSAPEQLPSS 660
AEETSPERPL DALGSFNLRG SNPLEQLGLY MKQDDDEEEP EAPAVPKPDE TSTERPLDAL 720
GSFKLGECNP LEQLGLYMKQ DDGEEEEPEA PVVPKPNETS LERPVDAFGS FNLKGSNPLE 780
QLGLYMKQDD DEEEPEAPAV PNLANDVEEG EID 813
Nucleotide Sequence
(Fasta)		CTCACGCGAA AAGCTCCTGT TCTTTAAAGG ATTTGATCAC GAGAGTTTCA GGTTTGGATT 60
TCGTAGTCAA TTTCCAGATT CTAGGGTTTT GGTTGGTCAA AATCTTCTAC TTCGTCCCGT 120
GTTTGTGGAT TGGTTCACGG ATCTTTGGAG ATTCCGAAAT TGGAGGCGAT TTTTATTCTA 180
GGGTTTCGGT GAAATTTGTA CCGTTTTTTG GATTAATTCT TACGTTGATC GCTTCTCTCC 240
TGGCGAGCTC GCGTTTAAAG GTTTAGATTT CAAGCTCCGT GTTGTCTATT TTGAAGCTAA 300
TTTATCTGGT GGAGGTTGAA TTTTGGTTTG TGAAGAATTT GTGTGGATTC AGCTGTTGGA 360
GATTCAAATG GTGTCTTGCA AATGAGTTGT AGAAGCTAGT GAGAATTATA TATATTGTGG 420
TAAGTCTTGC CAAAACAATG GTTGAAAGTG CTGCGTTCCC AGGAGGGTAT TATCGGAATA 480
CTTTTGAAGC GCCTGAGGAA TCAGAGGGCT CTGGGAGCTC TGCACAGATT GATACTGAGG 540
TCACTGCGTC TGAGAATTCA AGTACTCCTG CACGGAAGTG TATTATGTTG AATTCGAATG 600
ATGAAGATCC TTATGGTGTT CAGAGACAAG TCATTTCCTT GTATAACATG TCACAATCTG 660
AGAGGAAGGA TTTGATTTAT CGGCTTAAGC TGGAGTTGGA GCAGACAAAG ATAGTTCTTA 720
AAAATGCTGA GTTGCAGAGA ATGAACCCTG CTGCTGTGTC GTCTACTAGT GATAGGGTGG 780
GTTTTAGCAC TGGTCAAAAG ATATCATCTC GAGTCAGCAA TTCGAAGAAA CCATCTGATT 840
TTGCTGTGGG TTCGGGGAAG AAAGTTCGGC ATCAGAATGG GACTTCTCGT GGATGGAATC 900
GTGGTACCTC AGGGAAGTTT GAGTCTTCGA AAGAGACTAT GACTAGCACT CCTAACATTA 960
CACTGATGAA GCAATGTGAC ACGCTACTGA GAAAACTGTG GTCTCATCCG CATTCTTGGG 1020
TGTTTCAGGC GCCAGTTGAT GTAGTGAAAC TGAACATACC TGACTATCTC ACTACTATCA 1080
AGCATCCCAT GGACTTAGGG ACAGTAAAGA AGAACTTAGC GTCTGGTGTA TACTCAAGCC 1140
CACATGAGTT TGCTGCTGAT GTGAGGCTTA CATTTACCAA TGCGATGACA TATAACCCTC 1200
CAGGACATGA TGTTCACATT ATGGGGGATA TCCTTAGTAA ATTATTTGAA GCGCGGTGGA 1260
AAACTATCAA AAAGAAATTA CCACCTTGTA GCATGCAAAC GTTGCCTGCA GTAACATTGG 1320
AGCCCAATGA TGAAAGGAAA GCTGCTATAT CTGTACCTCC GGCGAAGAAG AGAAAGATGG 1380
CTTCACCCGT TAGAGAGAGT GTTCCAGAAC CGGTGAAGCC ACTTATGACA GAAGTGGAGA 1440
GGCATAGATT GGGCAGACAA CTCGAATCAC TACTCGACGA ACTTCCTGCA CATATCATTG 1500
ACTTCTTGAA GAAACACAAT TCAAATGGCG GAGAAATTGC AGAAGACGAA ATTGAGATAG 1560
ACATTGATGT TCTCAGTGAT GAAGTACTGG TCACTCTTCG AAACCTTCTA GATGAATATA 1620
TACAAAACAA AGAAGCAAAG CAGACGAATG TTGAACCATG TGAAATAGAG CTTATTAATG 1680
GATCACGACC GAGCAATTCG TCGCTGCAAA GAGGAAATGA AATGGCTGAT GAGTATGTCG 1740
ATGGGAATGA ACCGCCTATC TCAAGGAGCT CCAGTGATTC GGATTCTGGT AGCTCGGAAG 1800
ATCAATCTGA TGACGCTAAA CCCATGGTTC AAGGGGATTC TTCCAAGATG CCTGAAACTG 1860
CAAACTCTGA GGCGCAAAGA GATGAAAATA CAAGAATTGA TGATCTTTTT GTTGGGAGTC 1920
AATCTACTGG TGCGCTTGAG CAGATGGATA TTTGTTCTCA GCAAAAGCTT AGTTCTGATG 1980
AATCAGATGG CCAACATGAG GGAAATATAT TAGAGACTCC AGCTTCATCT GAGAAGCGCT 2040
ATAGAGCTGC GCTGTTGAAG AACCGGTTTG CAGATATCAT TCTAAAAGCA CGAGAGAAAC 2100
CACTTCCACA GAATGGTATT AAGGGCGATC CAGAAAGGCT GCGTAAAGAA AGAGAAGAAC 2160
TCGTACTGCA GAAGAAGAAA GAGAAAGCGC GTCTACAAGC TGAAGCAGAG GCTGCTGAAG 2220
ATGCTCGTCG CCAAGCTGAA GCAGAAGCCG CTGCAGAAGC TGCTGCTGAG GCTAAGCGGA 2280
AGAGAGAACT CGAAAGAGAA GCCGCTCGCC AAGCTTTATT GAAGATGGAG AAAACTGTAG 2340
AGATTAATGA GAACTCACGG TTTCTCGAGG ACCTAGAGAT GCTGAGTTCG AGTGCACCTG 2400
AGCAATTACC AAGCTCAGCC GAAGAAACCA GCCCCGAGAG ACCTTTAGAC GCACTTGGAA 2460
GTTTCAACCT CAGAGGAAGC AACCCACTTG AGCAACTCGG ACTGTACATG AAACAAGATG 2520
ATGATGAAGA AGAGCCCGAA GCTCCTGCTG TTCCAAAACC TGATGAAACC AGCACCGAGA 2580
GACCTTTAGA CGCACTTGGA AGTTTCAAAC TCGGAGAATG TAATCCGCTG GAGCAACTTG 2640
GACTGTACAT GAAACAAGAC GACGGTGAAG AAGAAGAACC CGAGGCTCCT GTGGTTCCAA 2700
AACCCAATGA AACCAGCCTC GAGAGACCTG TAGACGCATT TGGAAGTTTC AACCTCAAAG 2760
GAAGTAACCC TCTTGAGCAA CTCGGACTGT ACATGAAACA AGACGATGAT GAAGAAGAAC 2820
CCGAGGCTCC CGCTGTTCCA AACCTAGCCA ACGACGTGGA AGAAGGTGAA ATCGATTGAA 2880
CAAAAGAAGT GTATAAAATA TATACATGTA TTATATATAA AACAATAGCC AGGGCAGGTA 2940
CAAACAGACG CAAGAAATGA AGGTCTTAGC CCTTCTTAAG AGAAGATCCA ATATGTGGCT 3000
CATTGTTTAA TGAGTTTTGG AATGGATCTC TCTTAAGCCA GTGTGGTGTT TAATTATGTA 3060
AAACACAAAG CAAACGCTTA GAAGCTTTTT GCCACGAGAC TTCATGAAGA GTCCCTTAGT 3120
GTATGATTAT TAAAAAA 3138
Sequence Source Ensembl
Keyword

KW-0025--Alternative splicing
KW-0103--Bromodomain
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation
--
Interpro

IPR001487--Bromodomain
IPR027353--NET_dom
PROSITE

PS50014--BROMODOMAIN_2
PS51525--NET
Pfam

PF17035--BET
PF00439--Bromodomain
Gene Ontology

GO:0009507--C:chloroplast
GO:0005634--C:nucleus
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0087 fgenesh2_kg.5__ 500__ AT3G27260.1 Arabidopsis lyrata 95 0.0 1228
WERAM-Bro-0129 Bo7g084380.1 Brassica oleracea 82 0.0 894
WERAM-Brr-0196 Bra039088.1-P Brassica rapa 74 0.0 754
WERAM-Thc-0044 EOY02687 Theobroma cacao 55 6e-144 509
WERAM-Viv-0092 VIT_14s0171g00380.t01 Vitis vinifera 50 1e-133 474
WERAM-Glm-0208 GLYMA16G06710.1 Glycine max 49 3e-130 463
WERAM-Pot-0013 POPTR_0001s36360.1 Populus trichocarpa 47 8e-103 372
WERAM-Prp-0051 EMJ16706 Prunus persica 53 3e-96 350
WERAM-Sol-0051 Solyc03g111090.2.1 Solanum lycopersicum 43 2e-94 344
WERAM-Sot-0041 PGSC0003DMT400039290 Solanum tuberosum 49 5e-93 340
WERAM-Met-0001 KEH17395 Medicago truncatula 40 7e-92 336
WERAM-Amt-0007 ERN06807 Amborella trichopoda 40 7e-86 316
WERAM-Mua-0049 GSMUA_Achr2P20970_001 Musa acuminata 42 6e-71 266
WERAM-Hov-0096 MLOC_70538.1 Hordeum vulgare 38 3e-68 257
WERAM-Ori-0092 BGIOSGA027719-PA Oryza indica 39 5e-68 256
WERAM-Orr-0091 ORUFI08G01910.1 Oryza rufipogon 39 2e-67 254
WERAM-Orni-0086 ONIVA08G01570.1 Oryza nivara 39 2e-67 254
WERAM-Tra-0345 TRAES3BF067800230CFD_t1 Triticum aestivum 36 2e-67 254
WERAM-Aet-0046 EMT14126 Aegilops tauschii 42 2e-66 251
WERAM-Tru-0018 TRIUR3_07786-P1 Triticum urartu 42 5e-66 250
WERAM-Lep-0030 LPERR02G18800.1 Leersia perrieri 37 7e-65 246
WERAM-Sei-0065 Si016501m Setaria italica 34 9e-64 242
WERAM-Brd-0087 BRADI3G47960.1 Brachypodium distachyon 41 2e-62 238
WERAM-Zem-0009 GRMZM2G006707_P01 Zea mays 40 4e-61 234
WERAM-Sob-0073 Sb04g025160.1 Sorghum bicolor 41 7e-61 233
WERAM-Orp-0024 OPUNC02G21060.1 Oryza punctata 40 9e-60 229
WERAM-Orl-0061 KN539183.1_FGP004 Oryza longistaminata 40 2e-59 228
WERAM-Ors-0023 OS02T0601800-01 Oryza sativa 40 3e-59 228
WERAM-Org-0025 ORGLA02G0198800.1 Oryza glaberrima 40 3e-59 228
WERAM-Orb-0025 OBART02G23090.1 Oryza barthii 40 3e-59 228
WERAM-Orgl-0026 OGLUM02G23450.1 Oryza glumaepatula 40 4e-59 227
WERAM-Orm-0027 OMERI02G22640.1 Oryza meridionalis 40 5e-59 226
WERAM-Orbr-0029 OB02G30530.1 Oryza brachyantha 41 4e-58 223
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 32 5e-42 170
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 41 5e-35 147
Created Date 25-Jun-2016