WERAM Information

Tag Content
WERAM ID WERAM-Art-0062
Ensembl Protein ID AT3G01770.1
Uniprot Accession Q93ZB7; GTE11_ARATH; Q9S7A8
Genbank Protein ID NP_566151.1
Protein Name Transcription factor GTE11
Genbank Nucleotide ID NM_111043.2
Gene Name GTE11;BET10;At3g01770;F28J7.10;F4P13.32
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT3G01770 AT3G01770.1 AT3G01770.1
Details
Type Family Domain Substrates AA References (PMIDs)
Ac_Reader Bromodomain Bromodomain K 12466527
Status Reviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 4.30e-25 88.4 142 213
Organism Arabidopsis thaliana
NCBI Taxa ID 3702
Functional Description
(View)
Domain Profile
  Ac_Reader Bromodomain
    BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssvq 72 
                  ++++++ F+ pvd   l+ipdY++iik+PmdL t+k++l +g Yssp+ef +Dvrl f+Na++yn+ ++ v+
  AT3G01770.1 142 SQQHCWLFNTPVDVVkLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPSEFSADVRLTFRNAMTYNPSDNNVY 213
                  57899**************************************************************99886 PP
Protein Sequence
(Fasta)		MTVRNGGFPG DYNRNSFDSP GGCDDSPNAS KDDETFGVPR IVLPLSDLSS SERRKWIHTL 60
RQELEQLRSF QKSVGDLLPI SKIVTSTPAS NVSRPKSFGM SRCSTGPGKR VLPFTATKPE 120
PVTTSTMLRM KQCESLLKRL MSQQHCWLFN TPVDVVKLNI PDYFTIIKHP MDLGTVKSKL 180
TSGTYSSPSE FSADVRLTFR NAMTYNPSDN NVYRFADTLS KFFEVRWKTI EKKSSGTKSE 240
PSNLATLAHK DIAIPEPVAK KRKMNAVKRN SLLEPAKRVM TDEDRVKLGR DLGSLTEFPV 300
QIINFLRDHS SKEERSGDDE IEIDINDLSH DALFQLRDLF DEFLRENQKK DSNGEPCVLE 360
LLHGSGPGNS LTQHCDGSEL EDEDVDIGNY EHPISHISTV RTEKDSVGGL NQMEDASRGK 420
LSLIEGADGH QDGNSAPKEK ELPPEKRYRA ALLKNRFADI ILKAQEITLN QNEKRDPETL 480
QREKEELELQ KKKEKARLQA EAKEAEEARR KAEAQEAKRK LELEREAARQ ALLEMEKSVE 540
INENTRFLKD LELLKTVNTD QLRNLRDVGS ESDGLAVFGF GGSNPLEQLG LFMKHEEDED 600
ESDMLAFPDP GNEVEEGEID
Nucleotide Sequence
(Fasta)		TTAGGGACGG GACACTAGAG AAGGGAGGGC AGAGAGCGAT TTTGTTCTCT CTCTACTTCT 60
CGGTCGTCTT CTTCGTCTCC ACTCTAGGGT TTTACTCTAT CTTCTTCTTC ATCATCATCT 120
TCTACACCAA TCTCTAGCGT TAATCTGTTT CTGCTGGAGA AGATTTACGC TTGTTCCTCG 180
GTTCTCTTAC TTCTGCTCCG GTTCGATCGC TTGCTAAGTG TTTCGAGTTG GTTCGCACTT 240
CGGTGGGCGA TATCATGACT GTGAGGAACG GTGGTTTCCC AGGAGATTAT AATCGTAACA 300
GTTTTGACTC TCCCGGCGGC TGTGATGATA GCCCCAATGC TTCCAAGGAT GATGAAACTT 360
TTGGTGTCCC GAGAATAGTT TTACCCTTGT CTGACTTGTC ATCATCAGAA AGGAGAAAGT 420
GGATTCATAC GCTTCGTCAG GAGCTGGAAC AACTACGGTC CTTTCAGAAG AGTGTTGGGG 480
ACCTTCTTCC TATATCTAAG ATTGTTACTA GTACACCTGC AAGTAATGTG TCTCGCCCCA 540
AGAGTTTTGG AATGTCACGA TGCTCTACTG GCCCTGGAAA AAGGGTGCTC CCCTTCACAG 600
CAACCAAACC AGAGCCAGTC ACCACTTCCA CTATGCTTCG GATGAAGCAA TGTGAGAGCC 660
TCCTTAAACG ATTGATGTCG CAGCAGCATT GTTGGCTCTT TAATACCCCT GTGGACGTCG 720
TCAAGCTCAA CATTCCTGAT TATTTCACCA TTATCAAACA TCCTATGGAT TTAGGAACTG 780
TTAAAAGCAA GTTAACTTCC GGCACGTATT CAAGCCCTTC AGAGTTTTCT GCTGATGTCC 840
GTCTTACTTT CCGCAATGCT ATGACTTATA ACCCGTCAGA TAATAATGTG TATCGCTTCG 900
CTGATACTCT CAGCAAGTTT TTTGAAGTGA GATGGAAAAC TATCGAGAAG AAGTCATCCG 960
GAACCAAATC TGAACCAAGT AACTTGGCTA CTCTTGCTCA CAAAGATATT GCGATACCTG 1020
AGCCTGTGGC TAAGAAGAGA AAGATGAATG CTGTGAAACG TAACAGCCTC TTAGAGCCTG 1080
CTAAGCGGGT TATGACAGAT GAGGATAGAG TAAAGCTTGG CAGAGATTTG GGGTCCTTGA 1140
CAGAATTCCC TGTACAGATA ATAAATTTCC TGAGAGATCA CAGCTCCAAG GAAGAGAGAT 1200
CTGGAGATGA TGAGATAGAG ATTGACATCA ATGATCTCAG TCATGATGCC TTGTTCCAGT 1260
TGCGGGATCT CTTTGATGAG TTTCTGCGAG AAAATCAAAA GAAAGATTCA AACGGTGAAC 1320
CCTGTGTGTT AGAGCTTTTA CATGGGTCAG GGCCAGGAAA TTCATTGACG CAACACTGTG 1380
ATGGGAGTGA ATTGGAGGAC GAGGATGTTG ACATTGGTAA TTATGAGCAC CCTATATCTC 1440
ACATCTCAAC TGTCAGAACA GAAAAAGATT CCGTCGGTGG ATTGAATCAG ATGGAAGATG 1500
CATCCAGAGG GAAGCTAAGT CTTATTGAGG GGGCAGATGG TCATCAAGAT GGAAATAGTG 1560
CTCCAAAAGA GAAGGAACTA CCTCCAGAAA AGCGTTACAG GGCTGCTCTA TTGAAAAATC 1620
GATTTGCGGA TATAATCTTG AAGGCTCAAG AGATAACTCT TAATCAGAAT GAGAAACGAG 1680
ACCCAGAGAC ACTGCAACGT GAGAAGGAAG AACTGGAATT GCAAAAGAAG AAAGAAAAAG 1740
CACGGTTACA AGCAGAAGCC AAGGAAGCTG AAGAAGCTCG TAGAAAAGCT GAGGCACAAG 1800
AGGCTAAGAG GAAACTGGAA CTTGAAAGAG AAGCAGCCCG GCAGGCATTG CTTGAGATGG 1860
AGAAGTCGGT TGAAATAAAT GAGAACACAA GGTTTCTCAA GGACCTAGAA CTGCTCAAAA 1920
CGGTTAACAC GGACCAGTTA CGAAATCTAA GAGATGTTGG CTCTGAGTCT GATGGGTTGG 1980
CTGTATTTGG GTTTGGAGGA AGTAATCCTC TAGAGCAGCT GGGGCTATTT ATGAAACATG 2040
AGGAGGATGA AGATGAATCC GACATGCTTG CGTTTCCAGA TCCCGGCAAT GAAGTAGAAG 2100
AGGGTGAAAT CGACTGAGAT TCATGAGTGT TGTGTCTTGG ATAACAGCAG TCAAGTGTAC 2160
ATGAGTTGTT GTAAAAAATG ATAGTTAGAT TGATATTTAA CCAATGCGAT GGCATTTTAT 2220
CCGAGTAAAC AATCAATAAC ACTTTGTGTA GTGAGTAAAA TTTTGGTTAA TTCAATAAAC 2280
CAATGACC 2289
Sequence Source Ensembl
Keyword

KW-0010--Activator
KW-0103--Bromodomain
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0539--Nucleus
KW-0597--Phosphoprotein
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation
--
Interpro

IPR001487--Bromodomain
IPR027353--NET_dom
PROSITE

PS50014--BROMODOMAIN_2
PS51525--NET
Pfam

PF17035--BET
PF00439--Bromodomain
Gene Ontology

GO:0005634--C:nucleus
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0068 fgenesh2_kg.3__ 39__ AT3G01770.1 Arabidopsis lyrata 86 0.0 1020
WERAM-Pot-0013 POPTR_0001s36360.1 Populus trichocarpa 49 2e-128 456
WERAM-Prp-0051 EMJ16706 Prunus persica 52 4e-121 432
WERAM-Viv-0092 VIT_14s0171g00380.t01 Vitis vinifera 45 2e-116 417
WERAM-Bro-0129 Bo7g084380.1 Brassica oleracea 44 1e-112 404
WERAM-Brr-0125 Bra025262.1-P Brassica rapa 49 2e-101 367
WERAM-Sol-0038 Solyc02g093880.2.1 Solanum lycopersicum 43 6e-100 362
WERAM-Mua-0049 GSMUA_Achr2P20970_001 Musa acuminata 40 5e-95 346
WERAM-Met-0001 KEH17395 Medicago truncatula 41 1e-93 341
WERAM-Thc-0044 EOY02687 Theobroma cacao 48 2e-84 310
WERAM-Sot-0041 PGSC0003DMT400039290 Solanum tuberosum 44 3e-84 310
WERAM-Glm-0208 GLYMA16G06710.1 Glycine max 46 1e-81 301
WERAM-Amt-0007 ERN06807 Amborella trichopoda 41 7e-77 285
WERAM-Tra-0272 Traes_6DL_DBD2A14D3.1 Triticum aestivum 37 1e-72 271
WERAM-Zem-0073 GRMZM2G127299_P01 Zea mays 35 3e-70 263
WERAM-Lep-0030 LPERR02G18800.1 Leersia perrieri 36 1e-64 244
WERAM-Tru-0075 TRIUR3_28030-P1 Triticum urartu 42 3e-62 237
WERAM-Aet-0049 EMT04068 Aegilops tauschii 35 3e-62 237
WERAM-Sei-0065 Si016501m Setaria italica 41 3e-62 237
WERAM-Sob-0073 Sb04g025160.1 Sorghum bicolor 40 8e-62 235
WERAM-Hov-0096 MLOC_70538.1 Hordeum vulgare 42 8e-62 235
WERAM-Brd-0087 BRADI3G47960.1 Brachypodium distachyon 41 2e-61 234
WERAM-Orbr-0029 OB02G30530.1 Oryza brachyantha 35 8e-61 232
WERAM-Orp-0024 OPUNC02G21060.1 Oryza punctata 39 9e-59 225
WERAM-Orb-0025 OBART02G23090.1 Oryza barthii 39 9e-59 225
WERAM-Ori-0018 BGIOSGA006099-PA Oryza indica 39 1e-58 225
WERAM-Ors-0023 OS02T0601800-01 Oryza sativa 39 1e-58 225
WERAM-Org-0025 ORGLA02G0198800.1 Oryza glaberrima 39 1e-58 225
WERAM-Orl-0061 KN539183.1_FGP004 Oryza longistaminata 39 1e-58 225
WERAM-Orr-0024 ORUFI02G24500.1 Oryza rufipogon 39 2e-58 224
WERAM-Orm-0027 OMERI02G22640.1 Oryza meridionalis 39 2e-58 224
WERAM-Orni-0024 ONIVA02G26010.1 Oryza nivara 39 3e-58 224
WERAM-Orgl-0026 OGLUM02G23450.1 Oryza glumaepatula 39 4e-58 223
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 35 9e-44 176
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 36 2e-34 144
Created Date 25-Jun-2016