WERAM Information

Tag Content
WERAM ID WERAM-Art-0015
Ensembl Protein ID AT1G20670.1
Uniprot Accession Q9LM88; Q9LM88_ARATH
Genbank Protein ID NP_173490.1
Protein Name At1g20670
Genbank Nucleotide ID NM_101917.2
Gene Name At1g20670;BRD1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G20670 AT1G20670.1 AT1G20670.1
Details
Type Family Domain Substrates AA References (PMIDs)
Ac_Reader Bromodomain Bromodomain K 12466527
Status Reviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 1.00e-21 77.5 190 258
Organism Arabidopsis thaliana
NCBI Taxa ID 3702
Functional Description
(View)
Domain Profile
  Ac_Reader Bromodomain
    BROMO.txt   3 hevsepFrepvdpqleipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssvq 72 
                  ++   +++ pvdp  e+pdY++iik+Pmd+st +++l++g Ys++e+f +Dv li++Na++yn++++ ++
  AT1G20670.1 190 KDTYGVYSDPVDP-EELPDYFEIIKNPMDFSTLRNKLDSGAYSTLEQFERDVFLICTNAMEYNSADTVYY 258
                  55667899*****.6**************************************************99886 PP
Protein Sequence
(Fasta)		MGEVADTMTK KKKKGRPSLL DLQKRAIKQQ QQQLQQQQQQ HKNNHQDDDD HHHNNNNRSG 60
SKNPNSLNHR SKRRNPNSND GDSPWIKDEG EDNDDDERRE KKHKLLHGLN SHSHRHSPNS 120
QSDLNLDQTP EPSFNRRNLS AAASGSDYHT GEKASKATDI LQGSPVESGP TTPLPDKKLL 180
LFILDRLQKK DTYGVYSDPV DPEELPDYFE IIKNPMDFST LRNKLDSGAY STLEQFERDV 240
FLICTNAMEY NSADTVYYRQ ARAIQELAKK DFENLRQDSD DEEPQSQQQQ QQQPKVARRG 300
RPPKKHPEPS SIDRTASEIS ADALIPGDSS NKFSGAYNLR KAPPSYKFRQ AESSVRINHN 360
SETQSGWSVD WESEFPSSVV KAVNKYGMKH FNVDDNRRDT YNHLSTSTQE PSVLTTLEDE 420
LKQLIPVGLN MEYGYAKSLA RYAANLGPVA WKIASRRIET VLPSGIKFGQ GWVGENPAGP 480
EEDDSQKQNI LMSSGKQKCS NDLASDDHSN RILSPTASVS SAFIGNRHAS SQAIEETTPP 540
PARVLNPEID HPSSSSHQAG LLIKTESSNG LIRGFNHNAN QMLGIARQQQ PNVSNEATPV 600
SQQQGSLFPY PKQEFHRFPP DLNARLVSPN SPGSNQQTGS SSSQHPDLAL QL 652
Nucleotide Sequence
(Fasta)		AGGAGGAGAA AGAGAAAGGG GGAAGAGAGG AGAGAGAGAG AGAGAAAGAG ATTAGAGAGA 60
GAAAGAAGAG AAGAGGAGAG AGAAAAAAAT GGGTGAGGTA GCAGATACAA TGACGAAGAA 120
GAAGAAGAAA GGAAGGCCAT CTCTATTAGA CCTTCAAAAA CGAGCTATCA AACAACAACA 180
ACAACAATTA CAACAGCAAC AACAACAACA CAAGAACAAC CATCAAGACG ACGATGACCA 240
CCACCACAAC AACAACAATA GATCCGGCTC GAAAAACCCT AATTCTCTCA ATCACCGATC 300
CAAACGCCGG AACCCTAATT CAAACGACGG CGATTCCCCT TGGATCAAAG ACGAAGGTGA 360
AGACAACGAC GATGACGAGC GGCGAGAGAA GAAACATAAG CTTTTACATG GATTGAACTC 420
TCACTCTCAT CGACATTCTC CTAATTCTCA ATCCGATCTG AATCTCGACC AAACTCCAGA 480
ACCGTCCTTT AATAGACGCA ACCTCTCCGC CGCCGCCTCC GGATCTGATT ATCATACGGG 540
AGAAAAGGCT TCGAAAGCGA CAGACATTCT TCAAGGGTCT CCCGTGGAGT CTGGTCCCAC 600
TACTCCTTTG CCAGACAAAA AGTTGTTACT CTTCATCCTC GATAGACTTC AAAAGAAGGA 660
TACTTATGGA GTTTACTCTG ACCCGGTTGA TCCTGAGGAG CTTCCTGATT ATTTTGAGAT 720
TATTAAGAAT CCAATGGATT TTAGCACATT GCGGAACAAA TTAGACTCTG GAGCATATTC 780
CACTTTAGAA CAATTTGAGA GAGATGTGTT TTTAATATGT ACAAATGCAA TGGAATACAA 840
TTCAGCAGAC ACTGTATATT ATCGACAGGC ACGGGCTATA CAAGAGTTGG CAAAAAAGGA 900
TTTTGAGAAT TTAAGGCAAG ACAGTGATGA TGAAGAACCA CAAAGCCAAC AACAGCAACA 960
GCAGCAACCA AAAGTTGCAA GAAGAGGCCG TCCGCCAAAG AAACATCCTG AACCATCTTC 1020
TATTGACCGC ACTGCTTCTG AAATTTCAGC TGATGCTCTC ATTCCTGGAG ATAGCTCTAA 1080
CAAGTTTTCT GGTGCTTACA ATTTAAGAAA GGCTCCTCCT TCATACAAAT TCCGCCAAGC 1140
AGAATCATCA GTTAGAATCA ATCATAACAG TGAAACCCAG AGTGGTTGGT CGGTAGACTG 1200
GGAGAGCGAA TTTCCATCTT CGGTTGTGAA GGCGGTTAAC AAGTATGGGA TGAAACATTT 1260
CAATGTCGAT GATAACAGAC GCGATACCTA CAACCACCTC TCGACTTCTA CCCAAGAACC 1320
ATCGGTTTTG ACAACGCTTG AAGACGAGTT AAAACAGTTG ATTCCAGTTG GGCTGAACAT 1380
GGAGTACGGT TACGCGAAGA GTCTAGCACG ATATGCTGCA AATCTTGGTC CTGTTGCCTG 1440
GAAAATTGCA TCGAGGAGAA TCGAGACTGT ATTGCCCTCT GGAATCAAAT TTGGTCAAGG 1500
TTGGGTTGGA GAGAACCCAG CAGGACCTGA AGAGGATGAT TCTCAGAAAC AAAACATATT 1560
AATGTCGTCG GGAAAACAAA AGTGTTCTAA TGACTTAGCG TCTGATGATC ATTCTAACAG 1620
AATCCTGTCT CCAACCGCTT CAGTTTCAAG TGCTTTCATA GGAAACAGAC ATGCTTCCTC 1680
TCAAGCCATC GAAGAGACCA CACCACCACC TGCTCGTGTC TTGAATCCAG AAATCGATCA 1740
CCCATCCTCC TCCTCTCACC AAGCAGGACT GCTAATCAAA ACAGAGAGCA GCAACGGCCT 1800
CATCCGCGGA TTCAACCATA ATGCAAATCA GATGCTCGGA ATTGCTAGAC AGCAACAACC 1860
AAACGTAAGC AACGAGGCCA CACCGGTCTC GCAACAACAA GGCTCATTGT TTCCTTACCC 1920
CAAACAAGAA TTCCACCGGT TTCCGCCAGA CCTTAACGCT AGGCTAGTCT CACCAAACTC 1980
CCCGGGCTCT AATCAGCAGA CTGGTTCGTC CTCGTCGCAG CATCCGGATC TGGCATTACA 2040
GCTGTGAAGA TGAGTATTGG ATATTTGAAA GAGGAAGAAG AGGCATTTTC CATTGGCTAT 2100
CTCAGCCAAG GATTTTCTGG AATGAAATCT TGTGGAAAGT CAAGGCTTAT TTGTTGTGAC 2160
ATGAAAATAT ATGGGACAAG TCTCTCTCTA TTTGTACAGA TTGTTGCAAC TTCCATAATT 2220
TTTTTAGGGG TAAAAAGAGA AAACAAGAGG GAAAAGAAAA ACCACAGGAG TCACGCAGGC 2280
TGTAGAATAT ATAGTTTATA TTTTTTTCTC ATTTTTCTAG AAATTTTCAG ATATATTTTC 2340
GTATGTCCTA ATCTTGGCCA TAAAACAAAG TAATGTTAGG TTTGTGTCCT TGGC 2395
Sequence Source Ensembl
Keyword

KW-0103--Bromodomain
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0238--DNA-binding
KW-1185--Reference proteome
--
Interpro

IPR001487--Bromodomain
IPR018359--Bromodomain_CS
PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
Pfam

PF00439--Bromodomain
Gene Ontology

GO:0003677--F:DNA binding
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0045 fgenesh2_kg.1__ 2254__ AT1G20670.1 Arabidopsis lyrata 88 0.0 989
WERAM-Brr-0126 Bra025837.1-P Brassica rapa 77 0.0 855
WERAM-Bro-0094 Bo5g030560.1 Brassica oleracea 77 0.0 849
WERAM-Thc-0091 EOY15288 Theobroma cacao 57 2e-127 453
WERAM-Pot-0022 POPTR_0002s01010.1 Populus trichocarpa 50 1e-120 431
WERAM-Viv-0118 VIT_18s0122g01220.t01 Vitis vinifera 48 1e-109 394
WERAM-Prp-0047 EMJ12485 Prunus persica 44 6e-107 385
WERAM-Glm-0029 GLYMA04G01850.2 Glycine max 46 1e-99 361
WERAM-Met-0081 KEH36328 Medicago truncatula 46 2e-92 337
WERAM-Sol-0068 Solyc04g082530.2.1 Solanum lycopersicum 52 7e-91 332
WERAM-Sot-0044 PGSC0003DMT400040444 Solanum tuberosum 52 1e-88 324
WERAM-Mua-0067 GSMUA_Achr4P04930_001 Musa acuminata 54 7e-80 296
WERAM-Orbr-0112 OB09G25430.1 Oryza brachyantha 46 2e-69 261
WERAM-Ors-0095 OS09T0550000-01 Oryza sativa 49 1e-67 254
WERAM-Tra-0201 Traes_5BL_C2FF92AB7.1 Triticum aestivum 50 3e-67 254
WERAM-Brd-0113 BRADI4G37197.1 Brachypodium distachyon 49 3e-67 253
WERAM-Org-0099 ORGLA09G0149700.1 Oryza glaberrima 49 5e-67 253
WERAM-Sob-0032 Sb02g032020.1 Sorghum bicolor 48 2e-66 251
WERAM-Sei-0113 Si029325m Setaria italica 49 4e-66 249
WERAM-Orr-0109 ORUFI09G20360.1 Oryza rufipogon 49 2e-65 247
WERAM-Lep-0103 LPERR09G14620.1 Leersia perrieri 50 4e-65 246
WERAM-Orp-0099 OPUNC09G17160.1 Oryza punctata 50 5e-65 246
WERAM-Amt-0042 ERN17379 Amborella trichopoda 45 6e-65 246
WERAM-Orb-0106 OBART09G18790.1 Oryza barthii 49 9e-65 245
WERAM-Zem-0121 GRMZM2G353779_P01 Zea mays 47 4e-64 243
WERAM-Orm-0032 OMERI03G02320.1 Oryza meridionalis 45 7e-64 242
WERAM-Aet-0070 EMT11052 Aegilops tauschii 50 7e-64 242
WERAM-Orni-0029 ONIVA03G02060.1 Oryza nivara 48 1e-63 242
WERAM-Orgl-0032 OGLUM03G02390.1 Oryza glumaepatula 48 1e-63 241
WERAM-Ori-0036 BGIOSGA011773-PA Oryza indica 48 4e-63 239
WERAM-Tru-0062 TRIUR3_25198-P1 Triticum urartu 46 5e-63 239
WERAM-Orl-0064 KN539310.1_FGP014 Oryza longistaminata 48 1e-62 238
WERAM-Hov-0042 MLOC_4085.1 Hordeum vulgare 42 9e-60 229
WERAM-Php-0061 PP1S259_122V6.1 Physcomitrella patens 35 2e-44 177
WERAM-Sem-0087 EFJ10182 Selaginella moellendorffii 36 1e-34 145
WERAM-Tar-0011 ENSTRUP00000002345.1 Takifugu rubripes 47 5e-21 100
WERAM-Meg-0003 ENSMGAP00000000252.2 Meleagris gallopavo 47 7e-21 100
WERAM-Gaga-0007 ENSGALP00000001121.4 Gallus gallus 47 7e-21 99.8
WERAM-Ten-0080 ENSTNIP00000009563.1 Tetraodon nigroviridis 46 8e-21 99.8
WERAM-Orn-0045 ENSONIP00000004990.1 Oreochromis niloticus 49 1e-20 99.0
WERAM-Tut-0180 ENSTTRP00000015203.1 Tursiops truncatus 51 2e-20 98.6
WERAM-Anp-0002 ENSAPLP00000000272.1 Anas platyrhynchos 51 2e-20 98.6
WERAM-Otg-0037 ENSOGAP00000002289.2 Otolemur garnettii 52 2e-20 98.6
WERAM-Vip-0098 ENSVPAP00000009227.1 Vicugna pacos 51 2e-20 98.6
WERAM-Pes-0055 ENSPSIP00000007495.1 Pelodiscus sinensis 51 2e-20 98.2
WERAM-Mum-0217 ENSMUSP00000004985.9 Mus musculus 51 2e-20 98.2
WERAM-Cap-0116 ENSCPOP00000009174.2 Cavia porcellus 47 3e-20 97.8
WERAM-Dan-0074 ENSDNOP00000007515.3 Dasypus novemcinctus 51 3e-20 97.8
WERAM-Poa-0149 ENSPPYP00000018502.2 Pongo abelii 51 3e-20 97.8
WERAM-Ict-0068 ENSSTOP00000006036.2 Ictidomys tridecemlineatus 51 3e-20 97.8
WERAM-Aim-0006 ENSAMEP00000000373.1 Ailuropoda melanoleuca 51 3e-20 97.8
WERAM-Pat-0201 ENSPTRP00000046383.4 Pan troglodytes 51 3e-20 97.8
WERAM-Nol-0094 ENSNLEP00000011003.1 Nomascus leucogenys 51 3e-20 97.8
WERAM-Hos-0050 ENSP00000350267.6 Homo sapiens 51 3e-20 97.8
WERAM-Eqc-0025 ENSECAP00000004577.1 Equus caballus 51 3e-20 97.8
WERAM-Paa-0008 ENSPANP00000012515.1 Papio anubis 51 3e-20 97.8
WERAM-Gog-0148 ENSGGOP00000013085.2 Gorilla gorilla 51 3e-20 97.8
WERAM-Orc-0083 ENSOCUP00000007454.3 Oryctolagus cuniculus 51 3e-20 97.8
WERAM-Chs-0121 ENSCSAP00000006430.1 Chlorocebus sabaeus 51 3e-20 97.8
WERAM-Mup-0043 ENSMPUP00000004041.1 Mustela putorius furo 51 3e-20 97.8
WERAM-Caf-0020 ENSCAFP00000001989.4 Canis familiaris 51 3e-20 97.8
WERAM-Ova-0135 ENSOARP00000014056.1 Ovis aries 51 3e-20 97.8
WERAM-Fec-0022 ENSFCAP00000001618.3 Felis catus 51 3e-20 97.8
WERAM-Anc-0176 ENSACAP00000016633.3 Anolis carolinensis 51 3e-20 97.8
WERAM-Dio-0041 ENSDORP00000004516.1 Dipodomys ordii 51 3e-20 97.8
WERAM-Caj-0165 ENSCJAP00000029416.2 Callithrix jacchus 51 4e-20 97.4
WERAM-Tas-0080 ENSTSYP00000007958.1 Tarsius syrichta 51 4e-20 97.4
WERAM-Xim-0051 ENSXMAP00000004637.1 Xiphophorus maculatus 45 4e-20 97.4
WERAM-Ocp-0109 ENSOPRP00000010619.2 Ochotona princeps 51 4e-20 97.4
WERAM-Pof-0113 ENSPFOP00000009821.1 Poecilia formosa 45 5e-20 97.1
WERAM-Fia-0052 ENSFALP00000003674.1 Ficedula albicollis 49 5e-20 97.1
WERAM-Ran-0166 ENSRNOP00000041680.3 Rattus norvegicus 51 5e-20 97.1
WERAM-Ora-0025 ENSOANP00000003691.2 Ornithorhynchus anatinus 49 5e-20 97.1
WERAM-Mod-0118 ENSMODP00000031361.3 Monodelphis domestica 51 5e-20 97.1
WERAM-Mae-0048 ENSMEUP00000004688.1 Macropus eugenii 51 6e-20 96.7
WERAM-Myl-0031 ENSMLUP00000002199.2 Myotis lucifugus 49 1e-19 95.9
WERAM-Orla-0122 ENSORLP00000014580.1 Oryzias latipes 44 1e-19 95.9
WERAM-Gaa-0090 ENSGACP00000011699.1 Gasterosteus aculeatus 46 1e-19 95.9
WERAM-Sah-0064 ENSSHAP00000007688.1 Sarcophilus harrisii 48 3e-19 94.7
WERAM-Cym-0003 CMB028CT Cyanidioschyzon merolae 41 4e-19 94.4
WERAM-Tub-0066 ENSTBEP00000008262.1 Tupaia belangeri 49 4e-19 94.0
WERAM-Pem-0069 ENSPMAP00000007494.1 Petromyzon marinus 49 6e-19 93.6
WERAM-Soa-0089 ENSSARP00000008498.1 Sorex araneus 50 8e-19 93.2
WERAM-Tag-0057 ENSTGUP00000003959.1 Taeniopygia guttata 48 1e-18 92.8
WERAM-Ect-0118 ENSETEP00000013907.1 Echinops telfairi 49 1e-18 92.8
WERAM-Ere-0049 ENSEEUP00000004249.1 Erinaceus europaeus 49 1e-18 92.4
WERAM-Mim-0029 ENSMICP00000002767.1 Microcebus murinus 48 2e-18 91.7
WERAM-Leo-0167 ENSLOCP00000019767.1 Lepisosteus oculatus 47 3e-18 91.3
WERAM-Usm-0037 UM06029P0 Ustilago maydis 40 3e-18 91.3
WERAM-Bot-0219 ENSBTAP00000055298.1 Bos taurus 48 3e-18 91.3
WERAM-Loa-0006 ENSLAFP00000000466.3 Loxodonta africana 48 4e-18 90.9
WERAM-Lac-0016 ENSLACP00000002326.1 Latimeria chalumnae 47 7e-18 90.1
WERAM-Mam-0004 ENSMMUP00000000744.2 Macaca mulatta 48 8e-18 89.7
WERAM-Ptv-0134 ENSPVAP00000011359.1 Pteropus vampyrus 48 1e-17 89.4
Created Date 25-Jun-2016