WERAM Information

Tag Content
WERAM ID WERAM-Zem-0038
Ensembl Protein ID GRMZM2G050495_P01
Gene Name ALF10 LOC100501853 ZEAMMB73_065051
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM2G050495 GRMZM2G050495_T01 GRMZM2G050495_P01
GRMZM2G050495 GRMZM2G050495_T02 GRMZM2G050495_P02
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.40e-10 41.6 193 243
Organism Zea mays
Domain Profile
  Me_Reader PHD
            PHD.txt   3 iClvC.gkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                         C +C g  +e+  +++ Cd Cd+w+H++Cv ++  +++  +++ Cp C +
  GRMZM2G050495_P01 193 PCGTCgGMYSENGVFWIGCDICDKWYHGDCVRITPAEATHIDQYSCPACSN 243
                        59***4466666677*******************777775469******86 PP
Protein Sequence
(Fasta)		MDRHGSVRLP TPEDVFTDFR ARRDGILKAL TTDVEEFYKL CDPEYETLCL YGLPNETWKV 60
NVRPAKVPQQ LPEPAEGINI PRDSMPKEDW LSFVAAHSDA WLVAMAFHFG ALFGFDKDAR 120
RRLHMMINNH PTVSEVVIGS GEKQPKACNT NYETKSSSIK EPSSSSKLAE EPLPKKERQI 180
IKEDGGGEDE AYPCGTCGGM YSENGVFWIG CDICDKWYHG DCVRITPAEA THIDQYSCPA 240
CSNKRSRE 248
Nucleotide Sequence
(Fasta)		CCTCCCTGCC GGCCACCCGG TTCAAGAACT TTCTATCTGA AGTTCAATAA TTCTCTCGGC 60
AACTCAGCTC CCGCCAGACA ATAGCCACCA CCTCCGACGC CGCCTCCTCG TCCTCTTTCG 120
CCTGAACCCT AGCCTCGCAT CGGCCACCGC CACCGCTCTT CGTCGGCAGC TGCTGTGCGG 180
CTGAACGGCC GCGATGGACA GGCACGGCTC GGTTCGGCTG CCCACCCCCG AGGATGTCTT 240
CACGGATTTC CGCGCCCGCC GTGACGGCAT TCTCAAGGCA CTCACCACCG ATGTGGAGGA 300
GTTCTACAAG TTGTGCGACC CAGAGTATGA GACCCTGTGC CTGTATGGAC TACCTAACGA 360
AACCTGGAAA GTGAACGTTC GTCCTGCGAA AGTTCCTCAA CAACTACCAG AGCCAGCAGA 420
GGGAATAAAC ATTCCTCGCG ATTCAATGCC AAAGGAAGAT TGGCTCTCGT TCGTAGCTGC 480
ACACAGTGAT GCATGGTTGG TTGCTATGGC ATTTCACTTT GGGGCTCTCT TCGGATTTGA 540
TAAAGACGCC AGGAGACGGC TCCACATGAT GATCAATAAT CATCCCACTG TATCTGAAGT 600
TGTGATAGGG AGTGGGGAGA AGCAACCAAA AGCCTGCAAC ACAAATTACG AAACCAAGTC 660
AAGTTCTATT AAGGAACCCA GTTCTAGCAG CAAGCTAGCA GAGGAGCCTT TGCCAAAGAA 720
GGAGCGACAG ATCATCAAAG AAGATGGAGG CGGCGAGGAT GAAGCTTACC CATGCGGCAC 780
ATGTGGAGGG ATGTACTCGG AAAATGGAGT ATTCTGGATT GGCTGTGACA TTTGCGACAA 840
GTGGTACCAT GGTGACTGTG TTCGCATCAC ACCTGCGGAG GCAACGCACA TCGATCAGTA 900
CAGTTGCCCC GCTTGCAGCA ACAAGAGGAG CAGAGAGTGA GTGAGCATGG GTTGCCGGCG 960
CCCCTGGTTG ATGTAGTTAG GGTAGTAAGC ACTAATACTG GGCTACGTTT GGCGCACTGA 1020
TCGTAGTCAT TGTTACTCTT GCTTAGTATG AGTACTGAGT AGGCTCGCAG CAGTTGCTGC 1080
TCTTATAGTG CACTAGTGGA TTATTAAACG TCAAAACTCT CCCCGAGTGA TGTAGTCGTT 1140
TCCTGTTAAT GAACTGATGA CCCATTTCAT GCG 1174
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0089 Sb06g017810.1 Sorghum bicolor 73 7e-91 330
WERAM-Sei-0038 Si010902m Setaria italica 65 5e-85 311
WERAM-Orbr-0055 OB04G21120.1 Oryza brachyantha 55 8e-73 270
WERAM-Orm-0026 OMERI02G20640.1 Oryza meridionalis 61 3e-72 268
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 56 1e-71 266
WERAM-Brd-0086 BRADI3G46110.1 Brachypodium distachyon 59 3e-71 265
WERAM-Orr-0023 ORUFI02G21900.1 Oryza rufipogon 61 2e-70 262
WERAM-Orni-0023 ONIVA02G22970.1 Oryza nivara 61 2e-70 262
WERAM-Ori-0026 BGIOSGA008446-PA Oryza indica 61 2e-70 262
WERAM-Orgl-0025 OGLUM02G21140.1 Oryza glumaepatula 61 2e-70 262
WERAM-Org-0024 ORGLA02G0179500.1 Oryza glaberrima 61 2e-70 262
WERAM-Orb-0024 OBART02G20890.1 Oryza barthii 61 2e-70 262
WERAM-Ors-0022 OS02T0564100-01 Oryza sativa 61 4e-70 261
WERAM-Lep-0029 LPERR02G16910.1 Leersia perrieri 59 8e-70 260
WERAM-Orp-0023 OPUNC02G18840.1 Oryza punctata 56 6e-69 257
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 53 8e-64 240
WERAM-Glm-0216 GLYMA17G00630.1 Glycine max 52 6e-62 234
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 52 1e-61 233
WERAM-Prp-0081 EMJ24886 Prunus persica 53 1e-61 233
WERAM-Amt-0032 ERN11177 Amborella trichopoda 54 3e-61 232
WERAM-Thc-0077 EOY27191 Theobroma cacao 52 3e-61 232
WERAM-Pot-0035 POPTR_0003s04070.1 Populus trichocarpa 51 3e-61 232
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 51 4e-61 231
WERAM-Brr-0085 Bra016698.1-P Brassica rapa 49 5e-61 231
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 52 5e-60 228
WERAM-Php-0009 PP1S117_107V6.1 Physcomitrella patens 47 5e-60 228
WERAM-Met-0117 KEH32736 Medicago truncatula 48 8e-60 227
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 50 5e-59 224
WERAM-Bro-0146 Bo8g066080.1 Brassica oleracea 48 5e-59 224
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 52 3e-58 222
WERAM-Aet-0106 EMT19247 Aegilops tauschii 51 4e-58 221
WERAM-Orl-0078 KN539672.1_FGP003 Oryza longistaminata 52 4e-58 221
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 48 1e-57 220
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 51 2e-56 215
Created Date 25-Jun-2016