WERAM Information

Tag Content
WERAM ID WERAM-Brr-0085
Ensembl Protein ID Bra016698.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra016698 Bra016698.1 Bra016698.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.40e-11 44.7 33 244
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt 12 egekemvqCd 21
                   +g+k+++qCd
  Bra016698.1-P 33 DGQKFFLQCD 42
                   6678899998 PP
        PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    +C +Cg+++++  ++++Cd C++wfH+kCvk++  +++  k++ Cp+C +
  Bra016698.1-P 197 VCGACGDNYDD--FWICCDACEKWFHGKCVKITPAKAEHIKHYKCPTCST 244
                    8****555555..7*******************555554479******86 PP
Protein Sequence
(Fasta)		MEGIQNPIHR TVEEVFSDFK GRRAGLLKAL TTDGQKFFLQ CDPEKENLCL YGLPNETWEV 60
NLPVDEVPPE LPEPALGINF ARDGMPEKDW ITLVAVHSDS WLISVAFYFG ARFGFGKNER 120
KRLFQMINEL PTIFELITGN AKQSKDQSAN HNSSRSKSSG VKPRQSESHT KASKMSPPPR 180
EDDESGEDEE DDEQGAVCGA CGDNYDDFWI CCDACEKWFH GKCVKITPAK AEHIKHYKCP 240
TCSTNKKMRA
Nucleotide Sequence
(Fasta)		ATGGAGGGAA TACAGAATCC GATACACCGC ACTGTCGAAG AGGTGTTCAG CGACTTCAAG 60
GGTCGTAGAG CTGGTCTCCT CAAGGCTCTC ACTACAGATG GGCAGAAGTT TTTCCTTCAG 120
TGTGACCCTG AGAAGGAAAA CTTGTGTCTT TATGGACTTC CTAATGAGAC GTGGGAGGTT 180
AACCTTCCTG TTGATGAGGT CCCTCCTGAG CTTCCTGAAC CAGCTTTGGG CATCAACTTT 240
GCAAGAGACG GGATGCCAGA GAAAGACTGG ATTACTTTGG TTGCTGTTCA CAGTGACTCG 300
TGGCTCATCT CTGTTGCGTT TTACTTCGGT GCCCGTTTCG GTTTTGGTAA AAACGAGAGG 360
AAGAGGCTCT TCCAGATGAT AAATGAACTC CCAACCATTT TCGAGCTTAT AACTGGCAAT 420
GCAAAGCAAT CCAAGGATCA ATCTGCTAAC CACAACAGTA GCAGAAGCAA GTCTAGTGGT 480
GTCAAGCCTC GTCAATCTGA GTCTCACACC AAGGCTTCAA AGATGTCTCC ACCACCAAGA 540
GAAGACGATG AGAGCGGGGA AGATGAGGAG GATGATGAGC AAGGTGCGGT TTGCGGTGCG 600
TGTGGAGACA ACTATGATGA CTTCTGGATA TGTTGTGATG CTTGTGAGAA ATGGTTCCAT 660
GGAAAGTGCG TGAAGATCAC ACCTGCCAAG GCTGAGCACA TCAAACATTA CAAGTGTCCG 720
ACTTGCAGCA CCAACAAGAA GATGAGAGCT TGA 754
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0146 Bo8g066080.1 Brassica oleracea 100 4e-118 421
WERAM-Art-0010 AT1G14510.1 Arabidopsis thaliana 89 1e-105 379
WERAM-Arl-0043 fgenesh2_kg.1__ 1579__ AT1G14510.1 Arabidopsis lyrata 88 1e-104 376
WERAM-Glm-0084 GLYMA07G40165.1 Glycine max 79 4e-94 341
WERAM-Pot-0035 POPTR_0003s04070.1 Populus trichocarpa 77 1e-90 329
WERAM-Met-0117 KEH32736 Medicago truncatula 77 2e-89 326
WERAM-Prp-0081 EMJ24886 Prunus persica 77 6e-89 324
WERAM-Thc-0075 EOY26404 Theobroma cacao 77 1e-87 320
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 76 2e-87 318
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 73 1e-86 316
WERAM-Sot-0055 PGSC0003DMT400047018 Solanum tuberosum 73 3e-86 315
WERAM-Mua-0059 GSMUA_Achr3P16750_001 Musa acuminata 68 1e-81 299
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 69 2e-81 298
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 69 2e-81 298
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 68 1e-80 296
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 68 1e-80 296
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 68 1e-80 296
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 68 1e-80 296
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 68 1e-80 296
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 68 1e-80 296
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 68 1e-80 296
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 68 1e-80 296
WERAM-Amt-0032 ERN11177 Amborella trichopoda 67 3e-80 295
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 69 4e-80 294
WERAM-Sob-0083 Sb05g007010.1 Sorghum bicolor 69 2e-78 289
WERAM-Brd-0098 BRADI4G21040.1 Brachypodium distachyon 68 5e-78 287
WERAM-Sei-0086 Si023009m Setaria italica 65 2e-77 285
WERAM-Zem-0090 GRMZM2G158918_P01 Zea mays 65 5e-75 277
WERAM-Aet-0106 EMT19247 Aegilops tauschii 63 8e-73 270
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 62 1e-72 270
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 68 2e-72 269
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 64 6e-70 261
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 65 2e-69 259
WERAM-Php-0137 PP1S97_167V6.1 Physcomitrella patens 60 9e-67 250
Created Date 25-Jun-2016