WERAM Information

Tag Content
WERAM ID WERAM-Php-0009
Ensembl Protein ID PP1S117_107V6.1
Gene Name PHYPADRAFT_83812
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PP1S117_107V6 PP1S117_107V6.1 PP1S117_107V6.1
PP1S117_107V6 PP1S117_107V6.2 PP1S117_107V6.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.50e-12 47.2 210 260
Organism Physcomitrella patens
Domain Profile
  Me_Reader PHD
          PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                      t+C +Cg +++ +++++ Cd C++w+H+kCvk++  +++  k++ CpsC +
  PP1S117_107V6.1 210 TTCGTCGGSYTADEFWIGCDICEKWYHGKCVKITPARAEHIKQYKCPSCSN 260
                      79*****9999999********************666664479******86 PP
Protein Sequence
(Fasta)		MEGASVSTNP RSVDEVFKDY RGRRGGMLKA LIADVEEFYR QCDPEKENLC LYGYPDESWE 60
VNLPADEVPP ELPEPALGIN FARDGMQRKD WLSLVAVHSD AWLLAVAFYY GARFDKNERK 120
RLFNLINELP TVFDVVSGKK PVKEKASVNN NNNSNNNNNN NNNNNNSGGN KIKSAAKVQR 180
VVEPVKPKPA PPSPQDEDYF EDDEEEHGDT TCGTCGGSYT ADEFWIGCDI CEKWYHGKCV 240
KITPARAEHI KQYKCPSCSN KRART 265
Nucleotide Sequence
(Fasta)		CAATGTGCAG CTTGGGGTGA CAGAGGATCC GTTCTGGTCT ACAATTAGTT GCAGCTGCGA 60
TTTGTCGATT GCCTTGGCTG AGGCGTTTTA GGTTTTTTCG TGCACTCTCT GTGTAGACAG 120
CTTCGTTTCG CGGAGTGTTC GCCTCCTGCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT 180
CTCTCTCTCT TTTTTTTTGC GGAGAAGTTT GGTTAAGTTC TGGCGACGTT ATGGAAGGTG 240
CTTCAGTGTC CACAAACCCT CGGTCCGTGG ATGAAGTCTT CAAGGATTAT AGGGGGCGCC 300
GAGGAGGAAT GCTCAAGGCG CTCATCGCTG ACGTAGAAGA ATTTTATCGG CAATGTGATC 360
CAGAAAAGGA AAACTTGTGT TTATACGGAT ACCCTGATGA ATCATGGGAG GTTAACCTTC 420
CAGCTGATGA AGTGCCCCCG GAGCTACCGG AGCCTGCGCT GGGGATCAAC TTCGCCCGCG 480
ACGGAATGCA ACGGAAGGAC TGGTTGTCAT TAGTTGCTGT CCATAGTGAT GCGTGGCTGC 540
TTGCCGTAGC GTTTTATTAT GGAGCTCGAT TCGACAAAAA TGAAAGGAAG CGGTTGTTTA 600
ATTTGATCAA TGAGCTTCCT ACAGTGTTTG ATGTAGTGTC TGGGAAGAAG CCTGTGAAGG 660
AAAAGGCCAG TGTTAACAAC AACAACAATA GTAACAACAA CAACAACAAC AACAACAACA 720
ACAACAACAG TGGTGGAAAT AAAATAAAGT CTGCTGCTAA AGTGCAACGT GTGGTTGAAC 780
CCGTCAAGCC AAAACCTGCC CCCCCTTCCC CCCAGGATGA AGACTATTTT GAGGACGACG 840
AGGAGGAACA TGGAGATACA ACTTGCGGCA CCTGTGGAGG GAGTTACACT GCTGATGAGT 900
TCTGGATAGG GTGTGACATC TGTGAAAAAT GGTATCATGG AAAGTGTGTG AAGATAACTC 960
CTGCAAGAGC GGAGCACATC AAGCAATACA AGTGCCCTTC GTGCAGCAAC AAAAGAGCGC 1020
GTACGTAACA GAACATAAGT TAGTATTGCC GAGTTCGAGT TAGATGCAGA AATGGTATGA 1080
AAGGTCGTGT GAGGTAAACG TCCCGCAGCA GTAGGGTCAT GTACTTGGTT GAGCGTTTTA 1140
TAGAGCACTC GGCTGACATT GCACTAGAAT TCTGCTGTCA TATGTTGTTA TCCGAAGATA 1200
TTTCAGGATT GAGTGGGCAG TATCGTTGTG ATCATTTGTT CTGTTTGTAG TCGGTAGTCG 1260
GTATTGATTT TCGTGACGTG CTTGTTTAGA TGTCCAAACT CGTTTTCATC GAGGTGGCTC 1320
TCGATT 1327
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 69 6e-87 317
WERAM-Sot-0033 PGSC0003DMT400028638 Solanum tuberosum 61 1e-85 313
WERAM-Sol-0130 Solyc10g085180.1.1 Solanum lycopersicum 61 2e-85 312
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 60 3e-84 308
WERAM-Orm-0050 OMERI05G04360.1 Oryza meridionalis 56 1e-82 303
WERAM-Ori-0059 BGIOSGA018756-PA Oryza indica 57 2e-82 302
WERAM-Org-0051 ORGLA05G0040800.1 Oryza glaberrima 56 2e-82 302
WERAM-Zem-0003 AC225147.4_FGP003 Zea mays 55 5e-82 301
WERAM-Lep-0051 LPERR05G03920.1 Leersia perrieri 57 6e-82 301
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 66 1e-81 300
WERAM-Thc-0077 EOY27191 Theobroma cacao 65 2e-81 299
WERAM-Orbr-0060 OB05G14070.1 Oryza brachyantha 57 7e-81 297
WERAM-Amt-0088 ERM99796 Amborella trichopoda 64 1e-80 296
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 58 1e-80 296
WERAM-Glm-0075 GLYMA07G04040.1 Glycine max 62 2e-80 296
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 61 3e-80 295
WERAM-Sob-0119 Sb09g004740.1 Sorghum bicolor 57 3e-80 295
WERAM-Sei-0039 Si010912m Setaria italica 57 3e-80 295
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 59 3e-80 295
WERAM-Brd-0048 BRADI2G34640.1 Brachypodium distachyon 56 7e-80 294
WERAM-Prp-0085 EMJ19499 Prunus persica 60 8e-79 290
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 63 1e-78 290
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 64 6e-78 287
WERAM-Bro-0102 Bo5g136750.1 Brassica oleracea 61 1e-77 286
WERAM-Met-0172 KEH18446 Medicago truncatula 62 6e-77 284
WERAM-Orp-0045 OPUNC04G11800.1 Oryza punctata 55 6e-76 281
WERAM-Orni-0040 ONIVA04G12140.1 Oryza nivara 55 3e-75 278
WERAM-Ors-0042 OS04T0444900-01 Oryza sativa 54 7e-75 277
WERAM-Orgl-0044 OGLUM04G13710.1 Oryza glumaepatula 54 7e-75 277
WERAM-Orb-0044 OBART04G13930.1 Oryza barthii 54 7e-75 277
WERAM-Orr-0044 ORUFI04G15210.1 Oryza rufipogon 54 7e-75 277
WERAM-Brr-0085 Bra016698.1-P Brassica rapa 56 8e-75 277
WERAM-Aet-0099 EMT23706 Aegilops tauschii 53 9e-75 277
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 54 9e-71 263
WERAM-Tru-0043 TRIUR3_20050-P1 Triticum urartu 52 3e-55 212
Created Date 25-Jun-2016