WERAM Information

Tag Content
WERAM ID WERAM-Sob-0119
Ensembl Protein ID Sb09g004740.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb09g004740 Sb09g004740.1 Sb09g004740.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.00e-11 44.7 196 246
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    t+C +Cg  +  +++++ Cd C++w+H+kCvk++ +++++ k++ CpsC +
  Sb09g004740.1 196 TLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPTKAESIKQYKCPSCCN 246
                    78****999999999*******************777776679******86 PP
Protein Sequence
(Fasta)		MDASYRRAGA GSGSAPRSVD DIYKDYRARR SAILRALTHD VEEFYALCDP EKENLCLYGY 60
ANEAWEVALP AEEVPTELPE PALGINFARD GMNRRDWLAL VAVHSDSWLV SVAFYYAARL 120
NRNDRKRLFS MMNDLPTVFE VVSGGVKQSK ERDRSSTDNG GRNKLSAKQT SEPPLENNVR 180
EPDEGYDEDD GNHSETLCGT CGGIYSADEF WIGCDVCEKW YHGKCVKITP TKAESIKQYK 240
CPSCCNSKRP RPL 253
Nucleotide Sequence
(Fasta)		ATCGTTGCTC GCCTCCCGAC CGCATCGCGA TCAGTCATCT CCTCCCGCGG TCTCGCTCTC 60
GCTCTCGCCG GAGAGAGATC AGACGCGCCG CCGCCACCGC CGCCGCCGCG GGGCCATGGA 120
CGCCTCCTAC CGCCGCGCCG GCGCCGGGAG CGGCTCCGCT CCGCGCTCCG TCGACGACAT 180
CTACAAGGAC TACCGCGCCC GCCGCTCCGC CATCCTCCGC GCCCTCACCC ACGACGTCGA 240
GGAGTTCTAC GCGCTGTGCG ATCCAGAGAA GGAGAACCTG TGCCTGTACG GCTACGCCAA 300
CGAAGCGTGG GAGGTGGCGC TGCCGGCGGA GGAGGTGCCC ACGGAGCTGC CGGAGCCGGC 360
GCTCGGGATC AACTTCGCGC GCGACGGGAT GAACCGTCGC GACTGGCTCG CGCTCGTCGC 420
CGTCCACTCC GACTCGTGGC TCGTCTCCGT CGCATTCTAC TACGCCGCGC GGCTTAACCG 480
CAATGATCGG AAGCGTTTGT TCAGCATGAT GAATGATCTG CCAACTGTGT TTGAAGTCGT 540
CTCCGGTGGT GTGAAACAAT CTAAGGAGAG GGACAGATCC AGTACTGACA ATGGTGGTAG 600
AAATAAACTG TCAGCAAAGC AAACAAGTGA GCCGCCATTA GAAAATAATG TCAGGGAGCC 660
TGATGAGGGC TACGATGAAG ACGACGGCAA CCACAGCGAA ACCTTGTGCG GGACATGTGG 720
TGGAATATAC AGCGCAGATG AGTTCTGGAT CGGGTGCGAT GTGTGCGAGA AGTGGTACCA 780
TGGCAAGTGC GTGAAGATCA CCCCCACGAA GGCGGAGAGC ATAAAGCAGT ACAAGTGCCC 840
AAGCTGCTGC AATTCAAAAA GACCTAGGCC GCTCTAGGCC TGTAGCACCG CCCTCCTCAC 900
GGGAGGACGG CCATGGATGG AAGACTGAAC AAGCAGGGAG ATCAGATCGA GCTACTCCTT 960
TGCGCAAGGT CAATACCGCC TTGCGATGTT TACTGTATCT TTTCGATTAA GCTTACATAT 1020
GACGAACGAT GGTGATGCTA ATGTTGGTGG GAAGATCACA CATATTGATT ATATAACCTT 1080
GTTGTGGTTT CTCCATGCCA TGGAGAGTTA TGGTAGAGTC TGTATGTTGC CGGAGGAATA 1140
GGGGCAGGGG AAGCCTTTGT AACGTTTCTA AAGGTGAATT GGTCAGTTTA ATAATCCGTG 1200
AGGTTTATGT TAATATATTC TATTTACT 1229
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0083 GRMZM2G148810_P01 Zea mays 96 1e-143 506
WERAM-Sei-0039 Si010912m Setaria italica 91 1e-130 462
WERAM-Lep-0051 LPERR05G03920.1 Leersia perrieri 86 7e-116 413
WERAM-Ori-0059 BGIOSGA018756-PA Oryza indica 84 2e-115 411
WERAM-Orbr-0060 OB05G14070.1 Oryza brachyantha 84 5e-115 410
WERAM-Orm-0050 OMERI05G04360.1 Oryza meridionalis 85 6e-115 410
WERAM-Org-0051 ORGLA05G0040800.1 Oryza glaberrima 85 9e-115 409
WERAM-Orgl-0050 OGLUM05G04310.1 Oryza glumaepatula 76 1e-112 403
WERAM-Orb-0051 OBART05G04390.1 Oryza barthii 77 7e-112 400
WERAM-Brd-0048 BRADI2G34640.1 Brachypodium distachyon 84 1e-111 399
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 83 5e-110 394
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 83 1e-109 392
WERAM-Aet-0099 EMT23706 Aegilops tauschii 76 7e-104 374
WERAM-Mua-0107 GSMUA_Achr7P15530_001 Musa acuminata 73 7e-94 340
WERAM-Glm-0003 GLYMA01G29950.1 Glycine max 69 4e-89 325
WERAM-Prp-0085 EMJ19499 Prunus persica 68 2e-88 322
WERAM-Sot-0033 PGSC0003DMT400028638 Solanum tuberosum 65 3e-88 322
WERAM-Sol-0130 Solyc10g085180.1.1 Solanum lycopersicum 65 3e-88 322
WERAM-Viv-0083 VIT_13s0067g01000.t01 Vitis vinifera 71 1e-87 320
WERAM-Thc-0059 EOY07191 Theobroma cacao 71 5e-86 314
WERAM-Pot-0155 POPTR_0016s12420.1 Populus trichocarpa 66 1e-85 313
WERAM-Met-0092 KEH28874 Medicago truncatula 67 4e-84 308
WERAM-Orp-0040 OPUNC03G36010.1 Oryza punctata 64 5e-84 308
WERAM-Amt-0010 ERN05231 Amborella trichopoda 67 4e-83 305
WERAM-Ors-0037 OS03T0818300-01 Oryza sativa 67 4e-83 304
WERAM-Orr-0041 ORUFI03G40590.1 Oryza rufipogon 67 5e-83 304
WERAM-Orni-0038 ONIVA03G40570.1 Oryza nivara 67 5e-83 304
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 67 5e-83 304
WERAM-Php-0009 PP1S117_107V6.1 Physcomitrella patens 58 2e-82 302
WERAM-Brr-0171 Bra034860.1-P Brassica rapa 62 2e-79 292
WERAM-Bro-0019 Bo1g141160.1 Brassica oleracea 62 6e-78 287
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 62 7e-77 284
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 62 1e-76 283
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 60 2e-75 279
Created Date 25-Jun-2016