Tag |
Content |
WERAM ID |
WERAM-Tra-0209 |
Ensembl Protein ID |
Traes_5BL_F36388166.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDM |
JHDM2 |
7.10e-67 |
227.4 |
484 |
715 |
|
Organism |
Triticum aestivum |
Domain Profile |
HDM JHDM2
JHDM2.txt 6 dgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.............vgilkkkwaeedlkellksi 80 g l ++ lp+ +++ d+gPk y AyG a+e +r++++t+lh+d+sdavn+l++ + +lk +++ +d k+ ++ Traes_5DL_9DCF29857.2 484 SGLLSVSALLPDDILKIDMGPKSYIAYGYAQELGRGDSVTKLHCDISDAVNVLMHtakvapsegqenaIKNLKARHELQDEKDCCGNF 571 567888889******************************************************************************* PP JHDM2.txt 81 eeeeldevtrkrvqdp.........kekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfee 155 + +++d ++ + + + + galW+if+++d++k++ +l+k+ske+++ +v++ +p+hd+++yl++++++rL+ee Traes_5DL_9DCF29857.2 572 AIDGSDACHKNCLDSNhtsspncsmDDDGGALWDIFRREDVPKLETYLRKHSKEFRHiycsPVEKTFNPLHDETFYLTEEHKRRLKEE 659 999666555544433210011111145679**************************9999999999********************** PP JHDM2.txt 156 yGvegwtlvQklgdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211 +G+e+wt+vQklg+av+ipag+pHqv+nlksc k+a+dFvsPEnv+ec++lt+++r Traes_5DL_9DCF29857.2 660 HGIEPWTFVQKLGEAVFIPAGCPHQVRNLKSCTKIAIDFVSPENVQECVKLTQQFR 715 ******************************************************98 PP
|
Protein Sequence (Fasta) | MELLRIPLSL PILGGSVFPL LRQYCVYGTH DSLTWSSLQT TRRKQNLNGG RWSAQCATSH 60 DGASVSHVNG APKDSPLPDS LLRDARILYC ASPAMGHNKE AHPESNKRVP AIVDALEKLE 120 LTPKHRGSQV LEIQNFYPAS LDDVARVHSR TYITGLEKAM SKALDEGLIF IEGTGPTYAT 180 QTTFTESLLS AGAGITLVDS VVAASKLGLS PPLGFALIRP PGHHAVPEGP MGFCVFGNIA 240 VAARYAQCQH GLKRVMIIDF DVHHGNGTCD AFYDDPDIFF LSTHQLGSYP GTGKMNLIGQ 300 GSGEGTTLNL PLPGGSGDYS MRCAFDEVIA PSAQRFKPDI ILVSAGYDAH VLDPLAGLQF 360 TTGTFYMLAS SIKQLARELC SGRCVFFLEG GYNLQSLSSS VADTFRAFLD EPSLAAQFDD 420 PAMLYEEPTR RIKEAIEKVR HLHSL 445Protein Fasta Sequence
>Traes_5BL_F36388166.1|JHDM2|Triticum aestivum MELLRIPLSLPILGGSVFPLLRQYCVYGTHDSLTWSSLQTTRRKQNLNGGRWSAQCATSHDGASVSHVNGAPKDSPLPDSLLRDARILYCASPAMGHNKEAHPESNKRVPAIVDALEKLELTPKHRGSQVLEIQNFYPASLDDVARVHSRTYITGLEKAMSKALDEGLIFIEGTGPTYATQTTFTESLLSAGAGITLVDSVVAASKLGLSPPLGFALIRPPGHHAVPEGPMGFCVFGNIAVAARYAQCQHGLKRVMIIDFDVHHGNGTCDAFYDDPDIFFLSTHQLGSYPGTGKMNLIGQGSGEGTTLNLPLPGGSGDYSMRCAFDEVIAPSAQRFKPDIILVSAGYDAHVLDPLAGLQFTTGTFYMLASSIKQLARELCSGRCVFFLEGGYNLQSLSSSVADTFRAFLDEPSLAAQFDDPAMLYEEPTRRIKEAIEKVRHLHSL
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Nucleotide Sequence (Fasta) | ATGGAGCTTC TGCGGATACC ACTATCCCTA CCGATTCTTG GAGGAAGTGT GTTTCCTTTG 60 CTCAGACAGT ACTGTGTCTA TGGAACACAT GATTCCCTAA CCTGGAGCAG CTTACAAACC 120 ACCAGGAGAA AGCAGAACCT GAATGGGGGT CGGTGGTCTG CACAGTGTGC GACGAGTCAC 180 GATGGAGCTT CTGTCTCACA TGTAAATGGT GCTCCAAAGG ATTCGCCTTT GCCGGATAGT 240 TTGCTTCGTG ATGCTCGCAT CCTCTATTGT GCATCTCCTG CCATGGGTCA TAACAAGGAA 300 GCACATCCAG AATCAAACAA AAGAGTGCCA GCAATAGTTG ATGCTCTCGA AAAATTGGAG 360 CTTACACCAA AGCATCGGGG TTCACAGGTT CTTGAAATCC AAAATTTCTA CCCTGCTTCA 420 CTTGATGATG TTGCACGAGT TCATTCAAGA ACATACATCA CTGGACTTGA AAAGGCTATG 480 AGTAAGGCTT TGGATGAAGG TTTGATATTC ATCGAAGGAA CTGGACCAAC ATATGCTACA 540 CAGACTACTT TCACAGAATC ACTTCTTTCA GCTGGTGCTG GAATTACATT GGTTGATTCA 600 GTGGTTGCAG CATCAAAGCT GGGCCTAAGT CCACCTCTTG GATTTGCGCT AATAAGGCCA 660 CCCGGACACC ATGCTGTTCC TGAAGGTCCC ATGGGCTTTT GCGTCTTTGG GAACATTGCA 720 GTTGCAGCTC GGTACGCTCA GTGTCAACAT GGATTGAAGC GAGTAATGAT AATAGATTTT 780 GATGTTCACC ATGGCAATGG CACATGTGAT GCCTTTTATG ACGATCCAGA CATCTTCTTC 840 CTCTCAACCC ACCAGCTAGG AAGCTATCCC GGTACTGGTA AGATGAATCT AATTGGTCAG 900 GGCAGTGGCG AAGGAACAAC GCTGAACCTG CCATTGCCCG GTGGCTCAGG TGACTACTCA 960 ATGAGGTGCG CCTTTGATGA GGTCATTGCT CCATCTGCGC AGCGGTTCAA GCCCGATATC 1020 ATCCTCGTTT CAGCTGGCTA CGACGCGCAC GTGCTGGACC CTCTAGCGGG TCTGCAGTTC 1080 ACGACGGGCA CGTTCTACAT GCTGGCGTCG AGCATCAAGC AGCTGGCCAG GGAGCTGTGC 1140 AGCGGCCGCT GCGTCTTCTT CCTGGAAGGT GGTTACAACC TGCAGTCGCT CTCCAGCTCT 1200 GTGGCTGACA CCTTCCGTGC GTTCCTCGAC GAGCCCAGCC TCGCTGCTCA GTTCGACGAC 1260 CCGGCAATGT TGTACGAGGA GCCGACGCGG AGGATCAAGG AGGCGATCGA GAAGGTCAGG 1320 CATCTTCACT CGCTGTAG
1339Nucleotide Fasta Sequence
>Traes_5BL_F36388166.1|JHDM2|Triticum aestivum ATGGAGCTTCTGCGGATACCACTATCCCTACCGATTCTTGGAGGAAGTGTGTTTCCTTTGCTCAGACAGTACTGTGTCTATGGAACACATGATTCCCTAACCTGGAGCAGCTTACAAACCACCAGGAGAAAGCAGAACCTGAATGGGGGTCGGTGGTCTGCACAGTGTGCGACGAGTCACGATGGAGCTTCTGTCTCACATGTAAATGGTGCTCCAAAGGATTCGCCTTTGCCGGATAGTTTGCTTCGTGATGCTCGCATCCTCTATTGTGCATCTCCTGCCATGGGTCATAACAAGGAAGCACATCCAGAATCAAACAAAAGAGTGCCAGCAATAGTTGATGCTCTCGAAAAATTGGAGCTTACACCAAAGCATCGGGGTTCACAGGTTCTTGAAATCCAAAATTTCTACCCTGCTTCACTTGATGATGTTGCACGAGTTCATTCAAGAACATACATCACTGGACTTGAAAAGGCTATGAGTAAGGCTTTGGATGAAGGTTTGATATTCATCGAAGGAACTGGACCAACATATGCTACACAGACTACTTTCACAGAATCACTTCTTTCAGCTGGTGCTGGAATTACATTGGTTGATTCAGTGGTTGCAGCATCAAAGCTGGGCCTAAGTCCACCTCTTGGATTTGCGCTAATAAGGCCACCCGGACACCATGCTGTTCCTGAAGGTCCCATGGGCTTTTGCGTCTTTGGGAACATTGCAGTTGCAGCTCGGTACGCTCAGTGTCAACATGGATTGAAGCGAGTAATGATAATAGATTTTGATGTTCACCATGGCAATGGCACATGTGATGCCTTTTATGACGATCCAGACATCTTCTTCCTCTCAACCCACCAGCTAGGAAGCTATCCCGGTACTGGTAAGATGAATCTAATTGGTCAGGGCAGTGGCGAAGGAACAACGCTGAACCTGCCATTGCCCGGTGGCTCAGGTGACTACTCAATGAGGTGCGCCTTTGATGAGGTCATTGCTCCATCTGCGCAGCGGTTCAAGCCCGATATCATCCTCGTTTCAGCTGGCTACGACGCGCACGTGCTGGACCCTCTAGCGGGTCTGCAGTTCACGACGGGCACGTTCTACATGCTGGCGTCGAGCATCAAGCAGCTGGCCAGGGAGCTGTGCAGCGGCCGCTGCGTCTTCTTCCTGGAAGGTGGTTACAACCTGCAGTCGCTCTCCAGCTCTGTGGCTGACACCTTCCGTGCGTTCCTCGACGAGCCCAGCCTCGCTGCTCAGTTCGACGACCCGGCAATGTTGTACGAGGAGCCGACGCGGAGGATCAAGGAGGCGATCGAGAAGGTCAGGCATCTTCACTCGCTGTAG
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |