| Tag |
Content |
| WERAM ID |
WERAM-Sol-0053 |
| Ensembl Protein ID |
Solyc03g112410.1.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
5.80e-155 |
516.3 |
22 |
340 |
|
| Organism |
Solanum lycopersicum |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae.elsk.elkkfnvg 89
++v+y++d+++gey yg++h mkp+r++++h+L+lny+l++k+ei++p a++ee+ +fhs +y+efl++v+pe+ + ++ + + ++fnvg
Solyc03g112410.1.1 22 RRVSYFFDSSIGEYDYGEGHLMKPHRIRVAHNLILNYNLHRKMEIIEPFPATKEEIGSFHSSDYVEFLSSVSPETINdKYDSyQRRRFNVG 112
589***********************************************************************9883444348899***9 PP
class-1.txt 90 e.....dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgv 175
dcPvf glf++cq+++G+s+ aa+kLn++eadiainwaGGlhhakkseasGfcyvnDivl+ilellk hkrvly+did+hhGDgv
Solyc03g112410.1.1 113 LdsesfDCPVFYGLFDFCQTSSGGSIGAAAKLNRNEADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHKRVLYVDIDVHHGDGV 203
6455668************************************************************************************ PP
class-1.txt 176 eeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlge 266
eeaf ttdrvmtvsfhk+g+ ffPgtG+++d+ga +gkyya+n Pl +gidDes++++f++vi+kv+e+++Peavv+qcGaDslagDrlg+
Solyc03g112410.1.1 204 EEAFFTTDRVMTVSFHKFGD-FFPGTGHIKDIGASTGKYYALNAPLGNGIDDESFRSLFRPVIQKVMEVYQPEAVVVQCGADSLAGDRLGV 293
********************.********************************************************************** PP
class-1.txt 267 fnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
fnls+kgha+c++f++sfn+pl++lGGGGYt++nvaRcw+yetav++
Solyc03g112410.1.1 294 FNLSVKGHADCIRFLRSFNVPLMMLGGGGYTVKNVARCWCYETAVAV 340
********************************************986 PP
|
Protein Sequence
(Fasta) | MDSSVVEGGA SLRSTGTDAT KRRVSYFFDS SIGEYDYGEG HLMKPHRIRV AHNLILNYNL 60
HRKMEIIEPF PATKEEIGSF HSSDYVEFLS SVSPETINDK YDSYQRRRFN VGLDSESFDC 120
PVFYGLFDFC QTSSGGSIGA AAKLNRNEAD IAINWAGGLH HAKKSEASGF CYVNDIVLGI 180
LELLKVHKRV LYVDIDVHHG DGVEEAFFTT DRVMTVSFHK FGDFFPGTGH IKDIGASTGK 240
YYALNAPLGN GIDDESFRSL FRPVIQKVME VYQPEAVVVQ CGADSLAGDR LGVFNLSVKG 300
HADCIRFLRS FNVPLMMLGG GGYTVKNVAR CWCYETAVAV GVELDNDLPY NEFYEYFAPD 360
YILYHESLHM KNENSPSELE RIRNTLLEQL SRLPHVPSVP FQVTPSVTEV PEKEDENMDQ 420
RPKPEISQDY DTDDEEKSNN GKFSNYYNL 449Protein Fasta Sequence
>Solyc03g112410.1.1|Class-I|Solanum lycopersicum
MDSSVVEGGASLRSTGTDATKRRVSYFFDSSIGEYDYGEGHLMKPHRIRVAHNLILNYNLHRKMEIIEPFPATKEEIGSFHSSDYVEFLSSVSPETINDKYDSYQRRRFNVGLDSESFDCPVFYGLFDFCQTSSGGSIGAAAKLNRNEADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHKRVLYVDIDVHHGDGVEEAFFTTDRVMTVSFHKFGDFFPGTGHIKDIGASTGKYYALNAPLGNGIDDESFRSLFRPVIQKVMEVYQPEAVVVQCGADSLAGDRLGVFNLSVKGHADCIRFLRSFNVPLMMLGGGGYTVKNVARCWCYETAVAVGVELDNDLPYNEFYEYFAPDYILYHESLHMKNENSPSELERIRNTLLEQLSRLPHVPSVPFQVTPSVTEVPEKEDENMDQRPKPEISQDYDTDDEEKSNNGKFSNYYNL |
Nucleotide Sequence
(Fasta) | ATGGATTCTT CAGTCGTGGA GGGCGGCGCA TCGCTCCGTT CGACGGGTAC CGACGCTACA 60
AAACGTCGTG TTTCTTATTT CTTCGACTCT TCCATCGGCG AATATGATTA CGGCGAGGGT 120
CATCTAATGA AGCCTCACCG TATTCGTGTT GCCCACAATC TTATTTTAAA CTATAATCTT 180
CACCGTAAAA TGGAGATAAT TGAACCGTTT CCGGCGACTA AGGAGGAAAT TGGGTCGTTT 240
CACTCGTCGG ACTATGTGGA GTTTCTCTCT TCAGTTTCTC CTGAGACTAT TAATGACAAG 300
TACGATTCCT ACCAGCGTAG ACGCTTCAAT GTTGGTTTGG ACTCGGAAAG CTTTGATTGT 360
CCTGTTTTTT ATGGGCTTTT TGATTTTTGT CAAACTTCAT CTGGTGGCTC AATTGGCGCC 420
GCCGCTAAGC TTAATAGGAA TGAAGCTGAT ATAGCTATCA ATTGGGCTGG TGGGTTGCAT 480
CATGCAAAGA AAAGTGAAGC TTCTGGATTT TGCTATGTCA ATGATATTGT TCTTGGAATT 540
CTAGAACTTC TCAAGGTCCA CAAGCGTGTA TTGTATGTAG ACATTGATGT TCATCACGGG 600
GATGGAGTTG AGGAGGCTTT TTTTACCACT GATCGGGTTA TGACAGTGTC TTTCCATAAG 660
TTTGGAGACT TCTTTCCTGG TACAGGGCAT ATCAAAGACA TTGGTGCAAG TACCGGGAAG 720
TACTATGCCT TAAATGCACC ATTGGGTAAT GGTATTGATG ATGAAAGTTT CCGTAGTCTA 780
TTCCGTCCTG TAATCCAAAA AGTGATGGAG GTTTATCAAC CTGAAGCTGT TGTTGTTCAA 840
TGTGGTGCTG ATTCACTAGC AGGAGACAGG TTGGGTGTCT TTAACTTGTC TGTTAAAGGC 900
CATGCAGATT GCATTCGATT CCTCAGGTCT TTCAATGTCC CTTTAATGAT GTTGGGTGGT 960
GGAGGTTATA CCGTTAAAAA CGTTGCTCGG TGCTGGTGCT ATGAGACAGC AGTTGCAGTT 1020
GGAGTAGAGC TTGATAATGA TTTGCCTTAC AATGAGTTTT ACGAGTATTT TGCCCCTGAT 1080
TATATTCTTT ATCATGAATC ATTACATATG AAGAATGAAA ATTCGCCCTC GGAACTAGAG 1140
AGGATCAGGA ACACTTTGCT GGAGCAACTC TCGCGTTTAC CCCATGTACC CAGTGTTCCA 1200
TTTCAAGTGA CACCTTCCGT AACAGAGGTT CCAGAAAAGG AAGACGAAAA CATGGATCAA 1260
AGGCCTAAAC CAGAGATAAG CCAAGATTAC GATACTGACG ACGAGGAGAA GTCAAATAAC 1320
GGAAAGTTCA GTAATTACTA CAATCTTTAA
1351Nucleotide Fasta Sequence
>Solyc03g112410.1.1|Class-I|Solanum lycopersicum
ATGGATTCTTCAGTCGTGGAGGGCGGCGCATCGCTCCGTTCGACGGGTACCGACGCTACAAAACGTCGTGTTTCTTATTTCTTCGACTCTTCCATCGGCGAATATGATTACGGCGAGGGTCATCTAATGAAGCCTCACCGTATTCGTGTTGCCCACAATCTTATTTTAAACTATAATCTTCACCGTAAAATGGAGATAATTGAACCGTTTCCGGCGACTAAGGAGGAAATTGGGTCGTTTCACTCGTCGGACTATGTGGAGTTTCTCTCTTCAGTTTCTCCTGAGACTATTAATGACAAGTACGATTCCTACCAGCGTAGACGCTTCAATGTTGGTTTGGACTCGGAAAGCTTTGATTGTCCTGTTTTTTATGGGCTTTTTGATTTTTGTCAAACTTCATCTGGTGGCTCAATTGGCGCCGCCGCTAAGCTTAATAGGAATGAAGCTGATATAGCTATCAATTGGGCTGGTGGGTTGCATCATGCAAAGAAAAGTGAAGCTTCTGGATTTTGCTATGTCAATGATATTGTTCTTGGAATTCTAGAACTTCTCAAGGTCCACAAGCGTGTATTGTATGTAGACATTGATGTTCATCACGGGGATGGAGTTGAGGAGGCTTTTTTTACCACTGATCGGGTTATGACAGTGTCTTTCCATAAGTTTGGAGACTTCTTTCCTGGTACAGGGCATATCAAAGACATTGGTGCAAGTACCGGGAAGTACTATGCCTTAAATGCACCATTGGGTAATGGTATTGATGATGAAAGTTTCCGTAGTCTATTCCGTCCTGTAATCCAAAAAGTGATGGAGGTTTATCAACCTGAAGCTGTTGTTGTTCAATGTGGTGCTGATTCACTAGCAGGAGACAGGTTGGGTGTCTTTAACTTGTCTGTTAAAGGCCATGCAGATTGCATTCGATTCCTCAGGTCTTTCAATGTCCCTTTAATGATGTTGGGTGGTGGAGGTTATACCGTTAAAAACGTTGCTCGGTGCTGGTGCTATGAGACAGCAGTTGCAGTTGGAGTAGAGCTTGATAATGATTTGCCTTACAATGAGTTTTACGAGTATTTTGCCCCTGATTATATTCTTTATCATGAATCATTACATATGAAGAATGAAAATTCGCCCTCGGAACTAGAGAGGATCAGGAACACTTTGCTGGAGCAACTCTCGCGTTTACCCCATGTACCCAGTGTTCCATTTCAAGTGACACCTTCCGTAACAGAGGTTCCAGAAAAGGAAGACGAAAACATGGATCAAAGGCCTAAACCAGAGATAAGCCAAGATTACGATACTGACGACGAGGAGAAGTCAAATAACGGAAAGTTCAGTAATTACTACAATCTTTAA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
