| Tag |
Content |
| WERAM ID |
WERAM-Sob-0102 |
| Ensembl Protein ID |
Sb07g018230.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.20e-155 |
518.7 |
22 |
371 |
|
| Organism |
Sorghum bicolor |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfd 96
++v+y+y++++g+y+ygq+hpmkp+r++++h+Lv++ygl++ le+ +p as +++ +fhs++y+ fl + + + + ++ +k+fnvgedcPvfd
Sb07g018230.1 22 RRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASEADIRRFHSDDYVAFLASATGNPSVLDPRAVKRFNVGEDCPVFD 117
589*********************************************************************99999999**************** PP
class-1.txt 97 glfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhk 192
glf +cq+++G+s+ aa kLn+++adi++nwaGGlhhakkseasGfcyvnDivlailellk h+rvly+did+hhGDgveeaf tt+rvmtvsfhk
Sb07g018230.1 118 GLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNRVMTVSFHK 213
************************************************************************************************ PP
class-1.txt 193 ygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpl 288
yg+ ffPgtG+++dvga +gk+ya+nvPl+dgidD +++ +f+ +i+kv+e+++P++vvlqcGaDslagDrlg+fnls+kgha+c++f++s+n+p+
Sb07g018230.1 214 YGD-FFPGTGHITDVGAAEGKHYALNVPLSDGIDDATFRDLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSYNVPM 308
***.******************************************************************************************** PP
class-1.txt 289 lvlGGGGYtlrnvaRcwtyetavvl 313
+vlGGGGYt+rnvaRcw+yetav++
Sb07g018230.1 309 MVLGGGGYTIRNVARCWCYETAVAV 333
**********************986 PP
class-1.txt 53 aeellkfhseeyieflkkvepenaeelsk 81
++++ ++ +yi +++ ++en++++++
Sb07g018230.1 343 YNDYYEYFGPDYILHIQPKSVENQNTTKD 371
68888999999999999999988887653 PP
|
Protein Sequence
(Fasta) | MAASGEGASL PSPAGGEDAH RRRVSYFYEP SIGDYYYGQG HPMKPHRIRM AHSLVVHYGL 60
HRLLELSRPY PASEADIRRF HSDDYVAFLA SATGNPSVLD PRAVKRFNVG EDCPVFDGLF 120
PFCQASAGGS IGAAVKLNRG DADITVNWAG GLHHAKKSEA SGFCYVNDIV LAILELLKFH 180
RRVLYVDIDV HHGDGVEEAF FTTNRVMTVS FHKYGDFFPG TGHITDVGAA EGKHYALNVP 240
LSDGIDDATF RDLFQCIIKK VMEVYQPDVV VLQCGADSLA GDRLGCFNLS VKGHADCLRF 300
LRSYNVPMMV LGGGGYTIRN VARCWCYETA VAVGVEPDNK LPYNDYYEYF GPDYILHIQP 360
KSVENQNTTK DLENIKNMIL ESLSKIEHVP STQFHDRPSD PEAPEEKEED MDKRPAQRSR 420
LWSGGAYDSD TEDPDNLKSE SKDVTANLQM KDEPKNDL 458Protein Fasta Sequence
>Sb07g018230.1|Class-I|Sorghum bicolor
MAASGEGASLPSPAGGEDAHRRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASEADIRRFHSDDYVAFLASATGNPSVLDPRAVKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNRVMTVSFHKYGDFFPGTGHITDVGAAEGKHYALNVPLSDGIDDATFRDLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSYNVPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYILHIQPKSVENQNTTKDLENIKNMILESLSKIEHVPSTQFHDRPSDPEAPEEKEEDMDKRPAQRSRLWSGGAYDSDTEDPDNLKSESKDVTANLQMKDEPKNDL |
Nucleotide Sequence
(Fasta) | GAACCCCTAA TAAATCTAAA GAAAAACCTC CTTTGCCGGA CCTTAAACCA TCTCCGGGAG 60
GACCTTAACC ATCTCAGGCG AAATGGCGGC CTCCGGTGAG GGCGCGTCGC TGCCGTCTCC 120
GGCGGGCGGG GAGGATGCGC ACCGCCGCCG CGTGAGCTAT TTCTACGAGC CGTCGATCGG 180
CGACTACTAC TACGGGCAAG GTCACCCGAT GAAGCCCCAC CGCATCCGCA TGGCGCACTC 240
GCTGGTGGTC CACTACGGCC TCCACCGCCT CCTCGAGCTC TCCCGCCCCT ACCCGGCCTC 300
TGAGGCCGAC ATCCGCCGCT TCCACTCCGA CGACTACGTC GCCTTCCTCG CGTCCGCCAC 360
CGGAAACCCC AGTGTCCTCG ACCCGCGCGC CGTTAAGCGC TTCAACGTCG GTGAGGACTG 420
CCCCGTGTTC GACGGTCTCT TCCCCTTCTG CCAGGCCTCC GCGGGGGGAA GCATCGGCGC 480
CGCCGTCAAG CTCAACCGCG GGGATGCTGA CATCACCGTC AACTGGGCTG GCGGCCTCCA 540
CCACGCCAAG AAGAGCGAGG CCTCCGGTTT CTGCTATGTC AACGACATCG TCCTCGCCAT 600
CCTCGAGCTC CTCAAGTTCC ACAGGCGTGT GCTATATGTA GACATTGATG TCCATCATGG 660
AGATGGCGTG GAGGAGGCCT TCTTCACTAC AAACCGAGTC ATGACAGTTT CTTTTCACAA 720
GTATGGGGAT TTTTTCCCTG GTACTGGACA TATCACTGAT GTTGGGGCTG CCGAGGGGAA 780
GCATTATGCT CTGAATGTTC CCCTGAGTGA TGGTATCGAT GATGCCACCT TTCGTGATCT 840
GTTCCAATGC ATCATTAAGA AAGTTATGGA GGTTTATCAG CCAGACGTGG TTGTCCTCCA 900
ATGCGGAGCT GACTCTTTGG CTGGAGACAG GTTAGGTTGC TTCAACCTGT CTGTGAAGGG 960
TCATGCTGAC TGCCTCCGGT TTCTTAGGTC GTACAATGTT CCTATGATGG TTTTAGGTGG 1020
TGGAGGTTAC ACCATCAGAA ACGTTGCACG CTGCTGGTGC TATGAGACCG CAGTTGCTGT 1080
TGGAGTTGAA CCTGATAACA AGCTGCCTTA CAATGATTAC TATGAATACT TTGGCCCTGA 1140
TTATATTCTT CATATCCAAC CAAAAAGTGT TGAAAACCAG AATACTACAA AGGACTTGGA 1200
GAACATAAAG AACATGATAT TGGAGAGCCT GTCAAAGATA GAACATGTTC CCAGCACTCA 1260
ATTCCATGAC AGGCCGTCAG ACCCTGAAGC TCCAGAGGAG AAAGAGGAGG ACATGGATAA 1320
GAGGCCAGCT CAGCGCAGCA GATTATGGAG CGGAGGAGCT TATGACTCTG ATACAGAGGA 1380
TCCTGACAAC CTGAAAAGTG AGAGTAAAGA CGTAACTGCC AACTTGCAGA TGAAGGATGA 1440
ACCAAAAAAT GATCTGTAGA AGTTTTGGAA GTGCCCGAGT TACCGAGGTT TCAATGGGAT 1500
CGTCGACATG CATGCTGAAG AGCGGGGACG CATCTGAACC TATGTGCGCT GCTATCGGCC 1560
CCTGTGCAAA TGTAACACTG AATGTTTTTC CTGCGTGTTG GTAACTAGAT CTGGCCATCT 1620
GGCGCGTCCG AAACTATTGA GGTGAAGGAG CTAACTGACT ATTCCCGCAT GAGTTACTGT 1680
AGCATGCATG TAATCATTAG TCCATTAAAT TCTTAAACTT TTGTTGTCTG TGATGGTAAG 1740
CTGTATTGCT CTTTCTTT
1759Nucleotide Fasta Sequence
>Sb07g018230.1|Class-I|Sorghum bicolor
GAACCCCTAATAAATCTAAAGAAAAACCTCCTTTGCCGGACCTTAAACCATCTCCGGGAGGACCTTAACCATCTCAGGCGAAATGGCGGCCTCCGGTGAGGGCGCGTCGCTGCCGTCTCCGGCGGGCGGGGAGGATGCGCACCGCCGCCGCGTGAGCTATTTCTACGAGCCGTCGATCGGCGACTACTACTACGGGCAAGGTCACCCGATGAAGCCCCACCGCATCCGCATGGCGCACTCGCTGGTGGTCCACTACGGCCTCCACCGCCTCCTCGAGCTCTCCCGCCCCTACCCGGCCTCTGAGGCCGACATCCGCCGCTTCCACTCCGACGACTACGTCGCCTTCCTCGCGTCCGCCACCGGAAACCCCAGTGTCCTCGACCCGCGCGCCGTTAAGCGCTTCAACGTCGGTGAGGACTGCCCCGTGTTCGACGGTCTCTTCCCCTTCTGCCAGGCCTCCGCGGGGGGAAGCATCGGCGCCGCCGTCAAGCTCAACCGCGGGGATGCTGACATCACCGTCAACTGGGCTGGCGGCCTCCACCACGCCAAGAAGAGCGAGGCCTCCGGTTTCTGCTATGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAGTTCCACAGGCGTGTGCTATATGTAGACATTGATGTCCATCATGGAGATGGCGTGGAGGAGGCCTTCTTCACTACAAACCGAGTCATGACAGTTTCTTTTCACAAGTATGGGGATTTTTTCCCTGGTACTGGACATATCACTGATGTTGGGGCTGCCGAGGGGAAGCATTATGCTCTGAATGTTCCCCTGAGTGATGGTATCGATGATGCCACCTTTCGTGATCTGTTCCAATGCATCATTAAGAAAGTTATGGAGGTTTATCAGCCAGACGTGGTTGTCCTCCAATGCGGAGCTGACTCTTTGGCTGGAGACAGGTTAGGTTGCTTCAACCTGTCTGTGAAGGGTCATGCTGACTGCCTCCGGTTTCTTAGGTCGTACAATGTTCCTATGATGGTTTTAGGTGGTGGAGGTTACACCATCAGAAACGTTGCACGCTGCTGGTGCTATGAGACCGCAGTTGCTGTTGGAGTTGAACCTGATAACAAGCTGCCTTACAATGATTACTATGAATACTTTGGCCCTGATTATATTCTTCATATCCAACCAAAAAGTGTTGAAAACCAGAATACTACAAAGGACTTGGAGAACATAAAGAACATGATATTGGAGAGCCTGTCAAAGATAGAACATGTTCCCAGCACTCAATTCCATGACAGGCCGTCAGACCCTGAAGCTCCAGAGGAGAAAGAGGAGGACATGGATAAGAGGCCAGCTCAGCGCAGCAGATTATGGAGCGGAGGAGCTTATGACTCTGATACAGAGGATCCTGACAACCTGAAAAGTGAGAGTAAAGACGTAACTGCCAACTTGCAGATGAAGGATGAACCAAAAAATGATCTGTAGAAGTTTTGGAAGTGCCCGAGTTACCGAGGTTTCAATGGGATCGTCGACATGCATGCTGAAGAGCGGGGACGCATCTGAACCTATGTGCGCTGCTATCGGCCCCTGTGCAAATGTAACACTGAATGTTTTTCCTGCGTGTTGGTAACTAGATCTGGCCATCTGGCGCGTCCGAAACTATTGAGGTGAAGGAGCTAACTGACTATTCCCGCATGAGTTACTGTAGCATGCATGTAATCATTAGTCCATTAAATTCTTAAACTTTTGTTGTCTGTGATGGTAAGCTGTATTGCTCTTTCTTT
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
