| Tag |
Content |
| WERAM ID |
WERAM-Orr-0094 |
| Ensembl Protein ID |
ORUFI08G12880.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.80e-155 |
517.8 |
22 |
333 |
|
| Organism |
Oryza rufipogon |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPv 94
++v+y+y++++g+y+ygq+hpmkp+r++++h+Lv++ygl++ le+ +p as +++ +fhs++y+ fl + + + a ++ +k+fnvgedcPv
ORUFI08G12880.1 22 RRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASDADIRRFHSDDYVAFLASATGNPALLDARAVKRFNVGEDCPV 115
589*********************************************************************999999999************* PP
class-1.txt 95 fdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtv 188
fdglf +cq+++G+s+ aa kLn+++adi++nwaGGlhhakk easGfcyvnDivlailellk hkrvly+did+hhGDgveeaf tt+rvmt+
ORUFI08G12880.1 116 FDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHKRVLYVDIDVHHGDGVEEAFFTTNRVMTC 209
********************************************************************************************** PP
class-1.txt 189 sfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvk 282
sfhkyg+ ffPgtG+++dvga++gk+ya+nvPl+dgidD++++ +f+ +i+kv+e+++P++vvlqcGaDslagDrlg+fnls+kgha+c+++++
ORUFI08G12880.1 210 SFHKYGD-FFPGTGHITDVGAGEGKHYALNVPLSDGIDDDTFRDLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRYLR 302
*******.************************************************************************************** PP
class-1.txt 283 sfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
sfn+p++vlGGGGYt+rnvaRcw+yetav++
ORUFI08G12880.1 303 SFNIPMMVLGGGGYTIRNVARCWCYETAVAV 333
****************************986 PP
|
Protein Sequence
(Fasta) | MAASGEGASL ASAAGGEDGR RRRVSYFYEP SIGDYYYGQG HPMKPHRIRM AHSLVVHYGL 60
HRLLELSRPY PASDADIRRF HSDDYVAFLA SATGNPALLD ARAVKRFNVG EDCPVFDGLF 120
PFCQASAGGS IGAAVKLNRG DADITVNWAG GLHHAKKGEA SGFCYVNDIV LAILELLKFH 180
KRVLYVDIDV HHGDGVEEAF FTTNRVMTCS FHKYGDFFPG TGHITDVGAG EGKHYALNVP 240
LSDGIDDDTF RDLFQCIIKK VMEVYQPDVV VLQCGADSLA GDRLGCFNLS VKGHADCLRY 300
LRSFNIPMMV LGGGGYTIRN VARCWCYETA VAVGVEPDNK LPYNDYYEYF GPDYNLHIQP 360
RSVENLNSTK DLENIKSMIL DHLSKIEHVP STQFHDRPSD PEAPEQEEED MDKRPPQRSR 420
LWSGGAYESD TEDPDNMKTE TNDLSASSVM KDESNDDS 458Protein Fasta Sequence
>ORUFI08G12880.1|Class-I|Oryza rufipogon
MAASGEGASLASAAGGEDGRRRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASDADIRRFHSDDYVAFLASATGNPALLDARAVKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHKRVLYVDIDVHHGDGVEEAFFTTNRVMTCSFHKYGDFFPGTGHITDVGAGEGKHYALNVPLSDGIDDDTFRDLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRYLRSFNIPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYNLHIQPRSVENLNSTKDLENIKSMILDHLSKIEHVPSTQFHDRPSDPEAPEQEEEDMDKRPPQRSRLWSGGAYESDTEDPDNMKTETNDLSASSVMKDESNDDS |
Nucleotide Sequence
(Fasta) | AAACTGAATC CCTCTGTCCC TCCCGTCTCC TTGCCTTGGC TATAAACCCC CGGAAACCAC 60
AAGGCAGAGA GAAGGTCCTT CCCTTCCCAC AAGGGGAAAA AAGGGGAAAA AAAAAAGAAA 120
AGAGAAGAAG AAATCCTCCG AAATGGCGGC GTCCGGCGAG GGGGCGTCGC TGGCGTCGGC 180
GGCGGGAGGG GAGGACGGGC GGCGGCGGCG GGTGAGCTAC TTCTACGAGC CGTCGATCGG 240
GGACTACTAC TACGGGCAGG GGCACCCGAT GAAGCCCCAT CGCATCCGCA TGGCGCACTC 300
GCTGGTGGTC CACTACGGCC TCCACCGCCT CCTCGAGCTC TCCCGCCCCT ACCCGGCCTC 360
CGACGCCGAC ATCCGCCGCT TCCACTCCGA CGACTACGTC GCCTTCCTCG CCTCCGCCAC 420
CGGGAACCCC GCCCTGCTCG ACGCCCGCGC CGTCAAGCGC TTCAACGTCG GCGAGGACTG 480
CCCGGTCTTC GACGGCCTCT TCCCCTTCTG CCAGGCCTCC GCGGGGGGCA GCATCGGCGC 540
CGCCGTCAAG CTCAACCGCG GCGACGCCGA CATCACCGTC AACTGGGCGG GGGGCCTCCA 600
CCACGCCAAG AAGGGCGAGG CCTCCGGCTT CTGCTACGTC AACGACATCG TCCTCGCCAT 660
CCTCGAGCTC CTCAAGTTCC ACAAGCGTGT GCTATATGTA GACATTGATG TCCACCATGG 720
AGATGGCGTG GAGGAAGCTT TCTTCACTAC GAATCGAGTC ATGACTTGTT CCTTTCACAA 780
GTATGGGGAC TTTTTCCCTG GTACTGGGCA TATCACTGAT GTTGGAGCAG GCGAAGGAAA 840
ACATTATGCT TTAAATGTGC CCCTGAGTGA TGGCATTGAT GATGATACCT TTCGTGATCT 900
GTTCCAGTGC ATCATCAAAA AGGTAATGGA GGTTTATCAG CCAGATGTAG TTGTTCTCCA 960
GTGTGGAGCC GACTCTTTGG CTGGAGACAG GTTAGGTTGC TTCAACCTGT CTGTGAAAGG 1020
TCATGCAGAC TGCCTCCGTT ACCTTAGGTC ATTCAATATT CCTATGATGG TTTTGGGAGG 1080
TGGGGGTTAC ACCATCAGAA ATGTTGCTCG CTGCTGGTGC TATGAGACTG CAGTTGCTGT 1140
TGGAGTTGAA CCTGATAACA AGTTACCTTA TAATGACTAC TATGAGTACT TTGGTCCTGA 1200
TTATAATCTC CATATTCAAC CCAGAAGTGT GGAGAACCTG AATTCGACTA AAGACCTGGA 1260
GAACATAAAG AGCATGATAT TGGATCATCT CTCAAAAATT GAGCATGTTC CGAGCACTCA 1320
GTTCCATGAC AGACCATCAG ATCCTGAAGC TCCAGAGCAG GAAGAGGAGG ACATGGACAA 1380
GAGACCACCT CAGCGCAGTA GGTTATGGAG TGGAGGAGCT TATGAATCTG ATACAGAGGA 1440
TCCTGACAAC ATGAAAACTG AGACCAATGA CTTATCTGCC AGCTCTGTCA TGAAGGATGA 1500
ATCGAATGAT GATTCCTAGA AGAGATCCTG CGATTCTGGT TCTCAGCACT CCTGATTTGT 1560
ACGTGCATGC TGAAGAACAA GGAAAGTATC TGAAGATGTC TGATATCTGC GCCTGACCAT 1620
TTTGCAAAAC AATGAATGCT TTTTTGGGTG CTTCTAACTT TCAAGCATGT CGGTAATTCT 1680
GGTTAGTCGG CGGCACATCC TCAAATGGTT TGTGCCAGAG GAGTGTATGC TAGAATGATT 1740
CTTGCGCTGA TATGGATTTA TAGTTCTTTT ATGTTCATAC TTCTCCGATG TGTTGAACTC 1800
ATACCGCAGA TCCGCAATCA GTTCCCCCTA GCCTGTCCAA ACTTATTTTT TGTGGCATTT 1860
GAAATCCATC TGAACCGCAT TGTCATTCAT ATTTTGATTA AAGAATGCCT GAAGGGAAAA 1920
TTAGTTCAAG TGAATTCCCA GCATAGCTGC TGCGGCTG
1959Nucleotide Fasta Sequence
>ORUFI08G12880.1|Class-I|Oryza rufipogon
AAACTGAATCCCTCTGTCCCTCCCGTCTCCTTGCCTTGGCTATAAACCCCCGGAAACCACAAGGCAGAGAGAAGGTCCTTCCCTTCCCACAAGGGGAAAAAAGGGGAAAAAAAAAAGAAAAGAGAAGAAGAAATCCTCCGAAATGGCGGCGTCCGGCGAGGGGGCGTCGCTGGCGTCGGCGGCGGGAGGGGAGGACGGGCGGCGGCGGCGGGTGAGCTACTTCTACGAGCCGTCGATCGGGGACTACTACTACGGGCAGGGGCACCCGATGAAGCCCCATCGCATCCGCATGGCGCACTCGCTGGTGGTCCACTACGGCCTCCACCGCCTCCTCGAGCTCTCCCGCCCCTACCCGGCCTCCGACGCCGACATCCGCCGCTTCCACTCCGACGACTACGTCGCCTTCCTCGCCTCCGCCACCGGGAACCCCGCCCTGCTCGACGCCCGCGCCGTCAAGCGCTTCAACGTCGGCGAGGACTGCCCGGTCTTCGACGGCCTCTTCCCCTTCTGCCAGGCCTCCGCGGGGGGCAGCATCGGCGCCGCCGTCAAGCTCAACCGCGGCGACGCCGACATCACCGTCAACTGGGCGGGGGGCCTCCACCACGCCAAGAAGGGCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAGTTCCACAAGCGTGTGCTATATGTAGACATTGATGTCCACCATGGAGATGGCGTGGAGGAAGCTTTCTTCACTACGAATCGAGTCATGACTTGTTCCTTTCACAAGTATGGGGACTTTTTCCCTGGTACTGGGCATATCACTGATGTTGGAGCAGGCGAAGGAAAACATTATGCTTTAAATGTGCCCCTGAGTGATGGCATTGATGATGATACCTTTCGTGATCTGTTCCAGTGCATCATCAAAAAGGTAATGGAGGTTTATCAGCCAGATGTAGTTGTTCTCCAGTGTGGAGCCGACTCTTTGGCTGGAGACAGGTTAGGTTGCTTCAACCTGTCTGTGAAAGGTCATGCAGACTGCCTCCGTTACCTTAGGTCATTCAATATTCCTATGATGGTTTTGGGAGGTGGGGGTTACACCATCAGAAATGTTGCTCGCTGCTGGTGCTATGAGACTGCAGTTGCTGTTGGAGTTGAACCTGATAACAAGTTACCTTATAATGACTACTATGAGTACTTTGGTCCTGATTATAATCTCCATATTCAACCCAGAAGTGTGGAGAACCTGAATTCGACTAAAGACCTGGAGAACATAAAGAGCATGATATTGGATCATCTCTCAAAAATTGAGCATGTTCCGAGCACTCAGTTCCATGACAGACCATCAGATCCTGAAGCTCCAGAGCAGGAAGAGGAGGACATGGACAAGAGACCACCTCAGCGCAGTAGGTTATGGAGTGGAGGAGCTTATGAATCTGATACAGAGGATCCTGACAACATGAAAACTGAGACCAATGACTTATCTGCCAGCTCTGTCATGAAGGATGAATCGAATGATGATTCCTAGAAGAGATCCTGCGATTCTGGTTCTCAGCACTCCTGATTTGTACGTGCATGCTGAAGAACAAGGAAAGTATCTGAAGATGTCTGATATCTGCGCCTGACCATTTTGCAAAACAATGAATGCTTTTTTGGGTGCTTCTAACTTTCAAGCATGTCGGTAATTCTGGTTAGTCGGCGGCACATCCTCAAATGGTTTGTGCCAGAGGAGTGTATGCTAGAATGATTCTTGCGCTGATATGGATTTATAGTTCTTTTATGTTCATACTTCTCCGATGTGTTGAACTCATACCGCAGATCCGCAATCAGTTCCCCCTAGCCTGTCCAAACTTATTTTTTGTGGCATTTGAAATCCATCTGAACCGCATTGTCATTCATATTTTGATTAAAGAATGCCTGAAGGGAAAATTAGTTCAAGTGAATTCCCAGCATAGCTGCTGCGGCTG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
