| Tag |
Content |
| WERAM ID |
WERAM-Org-0090 |
| Ensembl Protein ID |
ORGLA08G0103000.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
3.70e-155 |
516.9 |
22 |
333 |
|
| Organism |
Oryza glaberrima |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedc 92
++v+y+y++++g+y+ygq+hpmkp+r++++h+Lv++ygl++ le+ +p as +++ +fhs++y+ fl + + + a ++ +k+fnvgedc
ORGLA08G0103000.1 22 RRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASDADIRRFHSDDYVAFLASATGNPALLDARAVKRFNVGEDC 113
589*********************************************************************999999999*********** PP
class-1.txt 93 PvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdr 184
Pvfdglf +cq+++G+s+ aa kLn+++adi++nwaGGlhhakk easGfcyvnDivlailellk h+rvly+did+hhGDgveeaf tt+r
ORGLA08G0103000.1 114 PVFDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNR 205
******************************************************************************************** PP
class-1.txt 185 vmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae 276
vmt+sfhkyg+ ffPgtG+++dvga++gk+ya+nvPl+dgidD++++ +f+ +i+kv+e+++P++vvlqcGaDslagDrlg+fnls+kgha+
ORGLA08G0103000.1 206 VMTCSFHKYGD-FFPGTGHITDVGAGEGKHYALNVPLSDGIDDDTFRDLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHAD 296
***********.******************************************************************************** PP
class-1.txt 277 cvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
c+++++sfn+p++vlGGGGYt+rnvaRcw+yetav++
ORGLA08G0103000.1 297 CLRYLRSFNIPMMVLGGGGYTIRNVARCWCYETAVAV 333
**********************************986 PP
|
Protein Sequence
(Fasta) | MAASGEGASL ASAAGGEDGR RRRVSYFYEP SIGDYYYGQG HPMKPHRIRM AHSLVVHYGL 60
HRLLELSRPY PASDADIRRF HSDDYVAFLA SATGNPALLD ARAVKRFNVG EDCPVFDGLF 120
PFCQASAGGS IGAAVKLNRG DADITVNWAG GLHHAKKGEA SGFCYVNDIV LAILELLKFH 180
RRVLYVDIDV HHGDGVEEAF FTTNRVMTCS FHKYGDFFPG TGHITDVGAG EGKHYALNVP 240
LSDGIDDDTF RDLFQCIIKK VMEVYQPDVV VLQCGADSLA GDRLGCFNLS VKGHADCLRY 300
LRSFNIPMMV LGGGGYTIRN VARCWCYETA VAVGVEPDNK LPYNDYYEYF GPDYNLHIQP 360
RSVENLNSTK DLENIKSMIL DHLSKIEHVP STQFHDRPSD PEAPEQEEED MDKRPPQRSR 420
LWSGGAYESD TEDPDNMKTE TNDLSASSVM KDESNDDS 458Protein Fasta Sequence
>ORGLA08G0103000.1|Class-I|Oryza glaberrima
MAASGEGASLASAAGGEDGRRRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASDADIRRFHSDDYVAFLASATGNPALLDARAVKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNRVMTCSFHKYGDFFPGTGHITDVGAGEGKHYALNVPLSDGIDDDTFRDLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRYLRSFNIPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYNLHIQPRSVENLNSTKDLENIKSMILDHLSKIEHVPSTQFHDRPSDPEAPEQEEEDMDKRPPQRSRLWSGGAYESDTEDPDNMKTETNDLSASSVMKDESNDDS |
Nucleotide Sequence
(Fasta) | ATGGCGGCGT CCGGCGAGGG GGCGTCGCTG GCGTCGGCGG CGGGAGGGGA GGACGGGCGG 60
CGGCGGCGGG TGAGCTACTT CTACGAGCCG TCGATCGGGG ACTACTACTA CGGGCAGGGG 120
CACCCGATGA AGCCCCACCG CATCCGCATG GCGCACTCGC TGGTGGTCCA CTACGGCCTC 180
CACCGCCTCC TCGAGCTCTC CCGCCCCTAC CCGGCCTCCG ACGCCGACAT CCGCCGCTTC 240
CACTCCGACG ACTACGTCGC CTTCCTCGCC TCCGCCACCG GGAACCCCGC CCTGCTCGAC 300
GCCCGCGCCG TCAAGCGCTT CAACGTCGGC GAGGACTGCC CGGTCTTCGA CGGCCTCTTC 360
CCCTTCTGCC AGGCCTCCGC GGGGGGCAGC ATCGGCGCCG CCGTCAAGCT CAACCGCGGC 420
GACGCCGACA TCACCGTCAA CTGGGCGGGG GGCCTCCACC ACGCCAAGAA GGGCGAGGCC 480
TCCGGCTTCT GCTACGTCAA CGACATCGTC CTCGCCATCC TCGAGCTCCT CAAGTTCCAC 540
AGGCGTGTGC TATATGTAGA CATTGATGTC CACCATGGAG ATGGCGTGGA GGAAGCTTTC 600
TTCACTACGA ATCGAGTCAT GACTTGTTCC TTTCACAAGT ATGGGGACTT CTTCCCTGGT 660
ACTGGGCATA TCACTGATGT TGGAGCAGGC GAAGGAAAAC ATTATGCTTT AAATGTGCCC 720
CTGAGTGATG GCATTGATGA TGATACCTTT CGTGATCTGT TCCAGTGCAT CATCAAAAAG 780
GTAATGGAGG TTTATCAGCC AGATGTAGTT GTTCTCCAGT GTGGAGCCGA CTCTTTGGCT 840
GGAGACAGGT TAGGTTGCTT CAACCTGTCT GTGAAAGGTC ATGCAGACTG CCTCCGTTAC 900
CTTAGGTCAT TCAATATTCC TATGATGGTT TTGGGAGGTG GGGGTTACAC CATCAGAAAT 960
GTTGCTCGCT GCTGGTGCTA TGAGACTGCA GTTGCTGTTG GAGTTGAACC TGATAACAAG 1020
TTACCTTATA ATGACTACTA TGAGTACTTT GGTCCTGATT ATAATCTCCA TATTCAACCC 1080
AGAAGTGTGG AGAACCTGAA TTCGACTAAA GACCTGGAGA ACATAAAGAG CATGATATTG 1140
GATCATCTCT CAAAAATTGA GCATGTTCCG AGCACTCAGT TCCATGACAG ACCATCAGAT 1200
CCTGAAGCTC CAGAGCAGGA AGAGGAGGAC ATGGACAAGA GACCACCTCA GCGCAGTAGG 1260
TTATGGAGTG GAGGAGCTTA TGAATCTGAT ACAGAGGATC CTGACAACAT GAAAACTGAG 1320
ACCAATGACT TATCTGCCAG CTCTGTCATG AAGGATGAAT CGAATGATGA TTCCTAG
1378Nucleotide Fasta Sequence
>ORGLA08G0103000.1|Class-I|Oryza glaberrima
ATGGCGGCGTCCGGCGAGGGGGCGTCGCTGGCGTCGGCGGCGGGAGGGGAGGACGGGCGGCGGCGGCGGGTGAGCTACTTCTACGAGCCGTCGATCGGGGACTACTACTACGGGCAGGGGCACCCGATGAAGCCCCACCGCATCCGCATGGCGCACTCGCTGGTGGTCCACTACGGCCTCCACCGCCTCCTCGAGCTCTCCCGCCCCTACCCGGCCTCCGACGCCGACATCCGCCGCTTCCACTCCGACGACTACGTCGCCTTCCTCGCCTCCGCCACCGGGAACCCCGCCCTGCTCGACGCCCGCGCCGTCAAGCGCTTCAACGTCGGCGAGGACTGCCCGGTCTTCGACGGCCTCTTCCCCTTCTGCCAGGCCTCCGCGGGGGGCAGCATCGGCGCCGCCGTCAAGCTCAACCGCGGCGACGCCGACATCACCGTCAACTGGGCGGGGGGCCTCCACCACGCCAAGAAGGGCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAGTTCCACAGGCGTGTGCTATATGTAGACATTGATGTCCACCATGGAGATGGCGTGGAGGAAGCTTTCTTCACTACGAATCGAGTCATGACTTGTTCCTTTCACAAGTATGGGGACTTCTTCCCTGGTACTGGGCATATCACTGATGTTGGAGCAGGCGAAGGAAAACATTATGCTTTAAATGTGCCCCTGAGTGATGGCATTGATGATGATACCTTTCGTGATCTGTTCCAGTGCATCATCAAAAAGGTAATGGAGGTTTATCAGCCAGATGTAGTTGTTCTCCAGTGTGGAGCCGACTCTTTGGCTGGAGACAGGTTAGGTTGCTTCAACCTGTCTGTGAAAGGTCATGCAGACTGCCTCCGTTACCTTAGGTCATTCAATATTCCTATGATGGTTTTGGGAGGTGGGGGTTACACCATCAGAAATGTTGCTCGCTGCTGGTGCTATGAGACTGCAGTTGCTGTTGGAGTTGAACCTGATAACAAGTTACCTTATAATGACTACTATGAGTACTTTGGTCCTGATTATAATCTCCATATTCAACCCAGAAGTGTGGAGAACCTGAATTCGACTAAAGACCTGGAGAACATAAAGAGCATGATATTGGATCATCTCTCAAAAATTGAGCATGTTCCGAGCACTCAGTTCCATGACAGACCATCAGATCCTGAAGCTCCAGAGCAGGAAGAGGAGGACATGGACAAGAGACCACCTCAGCGCAGTAGGTTATGGAGTGGAGGAGCTTATGAATCTGATACAGAGGATCCTGACAACATGAAAACTGAGACCAATGACTTATCTGCCAGCTCTGTCATGAAGGATGAATCGAATGATGATTCCTAG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
