| Tag |
Content |
| WERAM ID |
WERAM-Orm-0085 |
| Ensembl Protein ID |
OMERI08G09730.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
4.90e-155 |
516.9 |
22 |
333 |
|
| Organism |
Oryza meridionalis |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPv 94
++v+y+y++++g+y+ygq+hpmkp+r++++h+Lv++ygl++ le+ +p as +++ +fhs++y+ fl + + + a ++ +k+fnvgedcPv
OMERI08G09730.1 22 RRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASDADIRRFHSDDYVAFLASATGNPALLDARAVKRFNVGEDCPV 115
589*********************************************************************999999999************* PP
class-1.txt 95 fdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtv 188
fdglf +cq+++G+s+ aa kLn+++adi++nwaGGlhhakk easGfcyvnDivlailellk h+rvly+did+hhGDgveeaf tt+rvmt+
OMERI08G09730.1 116 FDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNRVMTC 209
********************************************************************************************** PP
class-1.txt 189 sfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvk 282
sfhkyg+ ffPgtG+++dvga++gk+ya+nvPl+dgidD++++ +f+ +i+kv+e+++P++vvlqcGaDslagDrlg+fnls+kgha+c+++++
OMERI08G09730.1 210 SFHKYGD-FFPGTGHITDVGAGEGKHYALNVPLSDGIDDDTFRDLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRYLR 302
*******.************************************************************************************** PP
class-1.txt 283 sfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
sfn+p++vlGGGGYt+rnvaRcw+yetav++
OMERI08G09730.1 303 SFNIPMMVLGGGGYTIRNVARCWCYETAVAV 333
****************************986 PP
|
Protein Sequence
(Fasta) | MAASGEGASL ASAAGGEDGR RRRVSYFYEP SIGDYYYGQG HPMKPHRIRM AHSLVVHYGL 60
HRLLELSRPY PASDADIRRF HSDDYVAFLA SATGNPALLD ARAVKRFNVG EDCPVFDGLF 120
PFCQASAGGS IGAAVKLNRG DADITVNWAG GLHHAKKGEA SGFCYVNDIV LAILELLKFH 180
RRVLYVDIDV HHGDGVEEAF FTTNRVMTCS FHKYGDFFPG TGHITDVGAG EGKHYALNVP 240
LSDGIDDDTF RDLFQCIIKK VMEVYQPDVV VLQCGADSLA GDRLGCFNLS VKGHADCLRY 300
LRSFNIPMMV LGGGGYTIRN VARCWCYETA VAVGVEPDNK LPYNDYYEYF GPDYNLHIQP 360
RSVENLNSTK DLENIKSMIL DHLSKIEHVP STQFHDRPSD PEAPEQEEED MDKRPPQRSR 420
LWSGGAYESD TEDPDNMKTE TNDLSASSVM KDESNDDS 458Protein Fasta Sequence
>OMERI08G09730.1|Class-I|Oryza meridionalis
MAASGEGASLASAAGGEDGRRRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASDADIRRFHSDDYVAFLASATGNPALLDARAVKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNRVMTCSFHKYGDFFPGTGHITDVGAGEGKHYALNVPLSDGIDDDTFRDLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRYLRSFNIPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYNLHIQPRSVENLNSTKDLENIKSMILDHLSKIEHVPSTQFHDRPSDPEAPEQEEEDMDKRPPQRSRLWSGGAYESDTEDPDNMKTETNDLSASSVMKDESNDDS |
Nucleotide Sequence
(Fasta) | GGAAAACTGA ATCCCTCTGT CCCTCCCGTC TCCTTGCCTT GCCTATAAAC CCCCGCAAAC 60
CACAAGGCAG AGAGGAACTC CTTCCCACAA GGGGGAAAAA AGGAAAAAAA AAAAAAGAGA 120
AGAAGAAATC CTCCGAAATG GCGGCGTCCG GCGAGGGGGC GTCGCTGGCG TCGGCGGCGG 180
GAGGGGAGGA TGGGCGGCGG CGGCGGGTGA GCTACTTCTA CGAGCCGTCG ATCGGGGACT 240
ACTACTACGG GCAGGGGCAC CCGATGAAGC CCCACCGCAT CCGCATGGCG CACTCGCTGG 300
TGGTCCACTA CGGCCTCCAC CGACTCCTCG AGCTCTCCCG CCCCTACCCG GCCTCCGACG 360
CCGACATCCG CCGCTTCCAC TCCGACGACT ACGTCGCCTT CCTCGCCTCC GCCACCGGGA 420
ACCCCGCCCT GCTCGACGCC CGCGCCGTCA AGCGCTTCAA CGTCGGCGAG GACTGCCCGG 480
TCTTCGACGG CCTCTTCCCC TTCTGCCAGG CCTCCGCGGG GGGCAGCATC GGCGCCGCCG 540
TCAAGCTCAA CCGCGGCGAC GCCGACATCA CCGTCAACTG GGCGGGCGGC CTCCACCACG 600
CCAAGAAGGG CGAGGCCTCC GGCTTCTGCT ACGTCAACGA CATCGTCCTC GCCATCCTCG 660
AGCTCCTCAA GTTCCACAGG CGTGTGCTAT ATGTAGACAT TGATGTCCAC CATGGAGATG 720
GCGTGGAGGA AGCTTTCTTC ACTACGAATC GAGTCATGAC TTGTTCCTTT CACAAGTATG 780
GGGACTTTTT CCCTGGTACT GGGCATATCA CTGATGTTGG AGCAGGCGAA GGAAAACATT 840
ATGCTTTAAA TGTGCCCCTG AGTGATGGCA TTGATGATGA TACCTTTCGT GATCTGTTCC 900
AGTGCATCAT CAAAAAGGTA ATGGAGGTTT ATCAGCCAGA TGTAGTTGTT CTCCAGTGTG 960
GAGCCGACTC CTTGGCTGGA GACAGGTTAG GTTGCTTCAA CCTGTCTGTG AAAGGTCATG 1020
CAGACTGCCT CCGTTACCTT AGGTCATTCA ATATTCCTAT GATGGTTTTG GGAGGTGGGG 1080
GTTACACCAT CAGAAATGTT GCTCGCTGCT GGTGCTATGA GACTGCAGTT GCTGTTGGAG 1140
TTGAACCTGA TAACAAGTTA CCTTATAATG ACTACTATGA GTACTTTGGT CCTGATTATA 1200
ATCTCCATAT TCAACCCAGA AGTGTGGAGA ACCTGAATTC GACTAAAGAC CTGGAGAACA 1260
TAAAGAGCAT GATATTGGAT CATCTCTCAA AAATTGAGCA TGTTCCAAGC ACTCAGTTCC 1320
ATGACAGACC ATCAGATCCT GAAGCTCCAG AGCAGGAAGA GGAGGACATG GACAAGAGAC 1380
CACCTCAGCG CAGTAGGTTA TGGAGTGGAG GAGCTTATGA GTCTGATACA GAGGATCCTG 1440
ACAACATGAA AACTGAGACC AATGACTTAT CTGCCAGCTC TGTCATGAAG GATGAATCGA 1500
ATGATGATTC CTAGAAGAGA TCCTGCGATT CTGGTTCTCA GCACTCCTGA TTCGTACGTG 1560
CATGCTGAAG AACAAGGAAA GTATCTGAAG ATGTCTGATA TCTGCGCCTG ACCATTTTGC 1620
AAAACAATGA ATGCTTTTTT GGGTGCTTCT AACTTTCGAG CATGTCGGTA ATTCTGGTTA 1680
GTCGGCGGCA CATCCCCAAA TGGTTTGTGC CAGAGTGTAT GCTGGAATGA TTCGTGCGCT 1740
GATATGGATT TATAGTTCTT TTGTGTTCAT ACTTCTCCGA TGTGTTGAAG TCATACCGCA 1800
GATCCGCAAT CAGTTCCCCC TAGCCTGTCC AAACTTATTT TTTGTGGCAT TTGAAATCCA 1860
TCTGAACCGC ATTGTCATTC ATATTTTGAT TAAAGAATGC CTGAAGGGAA AATTAGTTCA 1920
AGTGAATTCC CAGCATAGCT GATGCGGCTG CTTCTTTTTT TTTTCTTTTT TTTTTG
1977Nucleotide Fasta Sequence
>OMERI08G09730.1|Class-I|Oryza meridionalis
GGAAAACTGAATCCCTCTGTCCCTCCCGTCTCCTTGCCTTGCCTATAAACCCCCGCAAACCACAAGGCAGAGAGGAACTCCTTCCCACAAGGGGGAAAAAAGGAAAAAAAAAAAAAGAGAAGAAGAAATCCTCCGAAATGGCGGCGTCCGGCGAGGGGGCGTCGCTGGCGTCGGCGGCGGGAGGGGAGGATGGGCGGCGGCGGCGGGTGAGCTACTTCTACGAGCCGTCGATCGGGGACTACTACTACGGGCAGGGGCACCCGATGAAGCCCCACCGCATCCGCATGGCGCACTCGCTGGTGGTCCACTACGGCCTCCACCGACTCCTCGAGCTCTCCCGCCCCTACCCGGCCTCCGACGCCGACATCCGCCGCTTCCACTCCGACGACTACGTCGCCTTCCTCGCCTCCGCCACCGGGAACCCCGCCCTGCTCGACGCCCGCGCCGTCAAGCGCTTCAACGTCGGCGAGGACTGCCCGGTCTTCGACGGCCTCTTCCCCTTCTGCCAGGCCTCCGCGGGGGGCAGCATCGGCGCCGCCGTCAAGCTCAACCGCGGCGACGCCGACATCACCGTCAACTGGGCGGGCGGCCTCCACCACGCCAAGAAGGGCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAGTTCCACAGGCGTGTGCTATATGTAGACATTGATGTCCACCATGGAGATGGCGTGGAGGAAGCTTTCTTCACTACGAATCGAGTCATGACTTGTTCCTTTCACAAGTATGGGGACTTTTTCCCTGGTACTGGGCATATCACTGATGTTGGAGCAGGCGAAGGAAAACATTATGCTTTAAATGTGCCCCTGAGTGATGGCATTGATGATGATACCTTTCGTGATCTGTTCCAGTGCATCATCAAAAAGGTAATGGAGGTTTATCAGCCAGATGTAGTTGTTCTCCAGTGTGGAGCCGACTCCTTGGCTGGAGACAGGTTAGGTTGCTTCAACCTGTCTGTGAAAGGTCATGCAGACTGCCTCCGTTACCTTAGGTCATTCAATATTCCTATGATGGTTTTGGGAGGTGGGGGTTACACCATCAGAAATGTTGCTCGCTGCTGGTGCTATGAGACTGCAGTTGCTGTTGGAGTTGAACCTGATAACAAGTTACCTTATAATGACTACTATGAGTACTTTGGTCCTGATTATAATCTCCATATTCAACCCAGAAGTGTGGAGAACCTGAATTCGACTAAAGACCTGGAGAACATAAAGAGCATGATATTGGATCATCTCTCAAAAATTGAGCATGTTCCAAGCACTCAGTTCCATGACAGACCATCAGATCCTGAAGCTCCAGAGCAGGAAGAGGAGGACATGGACAAGAGACCACCTCAGCGCAGTAGGTTATGGAGTGGAGGAGCTTATGAGTCTGATACAGAGGATCCTGACAACATGAAAACTGAGACCAATGACTTATCTGCCAGCTCTGTCATGAAGGATGAATCGAATGATGATTCCTAGAAGAGATCCTGCGATTCTGGTTCTCAGCACTCCTGATTCGTACGTGCATGCTGAAGAACAAGGAAAGTATCTGAAGATGTCTGATATCTGCGCCTGACCATTTTGCAAAACAATGAATGCTTTTTTGGGTGCTTCTAACTTTCGAGCATGTCGGTAATTCTGGTTAGTCGGCGGCACATCCCCAAATGGTTTGTGCCAGAGTGTATGCTGGAATGATTCGTGCGCTGATATGGATTTATAGTTCTTTTGTGTTCATACTTCTCCGATGTGTTGAAGTCATACCGCAGATCCGCAATCAGTTCCCCCTAGCCTGTCCAAACTTATTTTTTGTGGCATTTGAAATCCATCTGAACCGCATTGTCATTCATATTTTGATTAAAGAATGCCTGAAGGGAAAATTAGTTCAAGTGAATTCCCAGCATAGCTGATGCGGCTGCTTCTTTTTTTTTTCTTTTTTTTTTG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
