| Tag |
Content |
| WERAM ID |
WERAM-Orgl-0088 |
| Ensembl Protein ID |
OGLUM08G12440.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
5.30e-155 |
516.9 |
22 |
333 |
|
| Organism |
Oryza glumaepatula |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPv 94
++v+y+y++++g+y+ygq+hpmkp+r++++h+Lv++ygl++ le+ +p as +++ +fhs++y+ fl + + + a ++ +k+fnvgedcPv
OGLUM08G12440.1 22 RRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASDADIRRFHSDDYVAFLASATGNPALLDARAVKRFNVGEDCPV 115
589*********************************************************************999999999************* PP
class-1.txt 95 fdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtv 188
fdglf +cq+++G+s+ aa kLn+++adi++nwaGGlhhakk easGfcyvnDivlailellk h+rvly+did+hhGDgveeaf tt+rvmt+
OGLUM08G12440.1 116 FDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNRVMTC 209
********************************************************************************************** PP
class-1.txt 189 sfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvk 282
sfhkyg+ ffPgtG+++dvga++gk+ya+nvPl+dgidD++++ +f+ +i+kv+e+++P++vvlqcGaDslagDrlg+fnls+kgha+c+++++
OGLUM08G12440.1 210 SFHKYGD-FFPGTGHITDVGAGEGKHYALNVPLSDGIDDDTFRDLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRYLR 302
*******.************************************************************************************** PP
class-1.txt 283 sfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
sfn+p++vlGGGGYt+rnvaRcw+yetav++
OGLUM08G12440.1 303 SFNIPMMVLGGGGYTIRNVARCWCYETAVAV 333
****************************986 PP
|
Protein Sequence
(Fasta) | MAASGEGASL ASAAGGEDGR RRRVSYFYEP SIGDYYYGQG HPMKPHRIRM AHSLVVHYGL 60
HRLLELSRPY PASDADIRRF HSDDYVAFLA SATGNPALLD ARAVKRFNVG EDCPVFDGLF 120
PFCQASAGGS IGAAVKLNRG DADITVNWAG GLHHAKKGEA SGFCYVNDIV LAILELLKFH 180
RRVLYVDIDV HHGDGVEEAF FTTNRVMTCS FHKYGDFFPG TGHITDVGAG EGKHYALNVP 240
LSDGIDDDTF RDLFQCIIKK VMEVYQPDVV VLQCGADSLA GDRLGCFNLS VKGHADCLRY 300
LRSFNIPMMV LGGGGYTIRN VARCWCYETA VAVGVEPDNK LPYNDYYEYF GPDYNLHIQP 360
RSVENLNSTK DLENIKSMIL DHLSKIEHVP STQFHDRPSD PEAPEQEEED MDKRPPQRSR 420
LWSGGAYESD TEDPDNMKTE TNDLSASSVM KDESNDDS 458Protein Fasta Sequence
>OGLUM08G12440.1|Class-I|Oryza glumaepatula
MAASGEGASLASAAGGEDGRRRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASDADIRRFHSDDYVAFLASATGNPALLDARAVKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNRVMTCSFHKYGDFFPGTGHITDVGAGEGKHYALNVPLSDGIDDDTFRDLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRYLRSFNIPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYNLHIQPRSVENLNSTKDLENIKSMILDHLSKIEHVPSTQFHDRPSDPEAPEQEEEDMDKRPPQRSRLWSGGAYESDTEDPDNMKTETNDLSASSVMKDESNDDS |
Nucleotide Sequence
(Fasta) | ATAACCAATG CAGAAAACCT ATAAATTCTA TGACGTGTAG GGTGAAAAGG AAAAAAAGAA 60
GGGAAAAACT GAATCCCTCT GTCCCTCCCG TCTCCTTGCC TTGGCTATAA ACCCCCGGAA 120
ACCACAAGGC AGAGAGAAGG TCCTTCCCTT CCCACAAGGG GAAAAAAGGG GAAAAAAAAA 180
AAGAAAAGAG AAGAAGAAAT CCTCCGAAAT GGCGGCGTCC GGCGAGGGGG CGTCGCTGGC 240
GTCGGCGGCG GGAGGGGAGG ACGGGCGGCG GCGGCGGGTG AGCTACTTCT ACGAGCCGTC 300
GATCGGGGAC TACTACTACG GGCAGGGGCA CCCGATGAAG CCCCACCGCA TCCGCATGGC 360
GCACTCGCTG GTGGTCCACT ACGGCCTCCA CCGCCTCCTC GAGCTCTCCC GCCCCTACCC 420
GGCCTCCGAC GCTGACATCC GCCGCTTCCA CTCCGACGAC TACGTCGCCT TCCTCGCCTC 480
CGCCACCGGG AACCCCGCCC TGCTCGACGC CCGCGCCGTC AAGCGCTTCA ACGTCGGCGA 540
GGACTGCCCG GTCTTCGACG GCCTCTTCCC CTTCTGCCAG GCCTCCGCGG GGGGCAGCAT 600
CGGCGCCGCC GTCAAGCTCA ACCGCGGCGA CGCCGACATC ACCGTCAACT GGGCGGGGGG 660
CCTCCACCAC GCCAAGAAGG GCGAGGCCTC CGGCTTCTGC TACGTCAACG ACATCGTCCT 720
CGCCATCCTC GAGCTCCTCA AGTTCCACAG GCGTGTGCTA TATGTAGACA TTGATGTCCA 780
CCATGGAGAT GGCGTGGAGG AAGCTTTCTT CACTACGAAT CGAGTCATGA CTTGTTCCTT 840
TCACAAGTAT GGGGACTTTT TCCCTGGTAC TGGGCATATC ACTGATGTTG GAGCAGGCGA 900
AGGAAAACAT TATGCTTTAA ATGTGCCCCT GAGTGATGGC ATTGATGATG ATACCTTTCG 960
TGATCTGTTC CAGTGCATCA TCAAAAAGGT AATGGAGGTT TATCAGCCAG ATGTAGTTGT 1020
TCTCCAGTGT GGAGCCGACT CTTTGGCTGG AGACAGGTTA GGTTGCTTCA ACCTGTCTGT 1080
GAAAGGTCAT GCAGACTGCC TCCGTTACCT TAGGTCATTC AATATTCCTA TGATGGTTTT 1140
GGGAGGTGGG GGTTACACCA TCAGAAATGT TGCTCGCTGC TGGTGCTATG AGACTGCAGT 1200
TGCTGTTGGA GTTGAACCTG ATAACAAGTT ACCTTATAAT GACTACTATG AGTACTTTGG 1260
TCCTGATTAT AATCTCCATA TTCAACCCAG AAGTGTGGAG AACCTGAATT CGACTAAAGA 1320
CCTGGAGAAC ATAAAGAGCA TGATATTGGA TCATCTCTCA AAAATTGAGC ATGTTCCGAG 1380
CACTCAGTTC CATGACAGAC CATCAGATCC TGAAGCTCCA GAGCAGGAAG AGGAGGACAT 1440
GGACAAGAGA CCACCTCAGC GCAGTAGGTT ATGGAGTGGA GGAGCTTATG AATCTGATAC 1500
AGAGGATCCT GACAACATGA AAACTGAGAC CAATGACTTA TCTGCCAGCT CTGTCATGAA 1560
GGATGAATCG AATGATGATT CCTAGAAGAG ATCCTGCGAT TCTGGTTCTC AGCACTCCTG 1620
ATTTGTACGT GCATGCTGAA GAACAAGGAA AGTATCTGAA GATGTCTGAT ATCTGCGCCT 1680
GACCATTTTG CAAAACAATG AATGCTTTTT TGGGTGCTTC TAACTTTCAA GCATGTCGGT 1740
AATTCTGGTT AGTCGGCGGC ACATCCTCAA ATGGTTTGTG CCAGAGGAGT GTATGCTAGA 1800
ATGATTCTTG CGCTGATATG GATTTATAGT TCTTTTATGT TCATACTTCT CCGATGTGTT 1860
GAACTCATAC CGCAGATCCG CAATCAGTTC CCCCTAGCCT GTCCAAACTT ATTTTTTGTG 1920
GCATTTGAAA TCCATCTGAA CCGCATTGTC ATTCATATTT TGATTAAAGA ATGCCTGAAG 1980
GGAAAATTAG TTCAAGTGAA TTCCCAGCAT AGCTGCTGCG GCTGCTTCTT TTTTTTTTTC 2040
TTTATTTT
2049Nucleotide Fasta Sequence
>OGLUM08G12440.1|Class-I|Oryza glumaepatula
ATAACCAATGCAGAAAACCTATAAATTCTATGACGTGTAGGGTGAAAAGGAAAAAAAGAAGGGAAAAACTGAATCCCTCTGTCCCTCCCGTCTCCTTGCCTTGGCTATAAACCCCCGGAAACCACAAGGCAGAGAGAAGGTCCTTCCCTTCCCACAAGGGGAAAAAAGGGGAAAAAAAAAAAGAAAAGAGAAGAAGAAATCCTCCGAAATGGCGGCGTCCGGCGAGGGGGCGTCGCTGGCGTCGGCGGCGGGAGGGGAGGACGGGCGGCGGCGGCGGGTGAGCTACTTCTACGAGCCGTCGATCGGGGACTACTACTACGGGCAGGGGCACCCGATGAAGCCCCACCGCATCCGCATGGCGCACTCGCTGGTGGTCCACTACGGCCTCCACCGCCTCCTCGAGCTCTCCCGCCCCTACCCGGCCTCCGACGCTGACATCCGCCGCTTCCACTCCGACGACTACGTCGCCTTCCTCGCCTCCGCCACCGGGAACCCCGCCCTGCTCGACGCCCGCGCCGTCAAGCGCTTCAACGTCGGCGAGGACTGCCCGGTCTTCGACGGCCTCTTCCCCTTCTGCCAGGCCTCCGCGGGGGGCAGCATCGGCGCCGCCGTCAAGCTCAACCGCGGCGACGCCGACATCACCGTCAACTGGGCGGGGGGCCTCCACCACGCCAAGAAGGGCGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAGTTCCACAGGCGTGTGCTATATGTAGACATTGATGTCCACCATGGAGATGGCGTGGAGGAAGCTTTCTTCACTACGAATCGAGTCATGACTTGTTCCTTTCACAAGTATGGGGACTTTTTCCCTGGTACTGGGCATATCACTGATGTTGGAGCAGGCGAAGGAAAACATTATGCTTTAAATGTGCCCCTGAGTGATGGCATTGATGATGATACCTTTCGTGATCTGTTCCAGTGCATCATCAAAAAGGTAATGGAGGTTTATCAGCCAGATGTAGTTGTTCTCCAGTGTGGAGCCGACTCTTTGGCTGGAGACAGGTTAGGTTGCTTCAACCTGTCTGTGAAAGGTCATGCAGACTGCCTCCGTTACCTTAGGTCATTCAATATTCCTATGATGGTTTTGGGAGGTGGGGGTTACACCATCAGAAATGTTGCTCGCTGCTGGTGCTATGAGACTGCAGTTGCTGTTGGAGTTGAACCTGATAACAAGTTACCTTATAATGACTACTATGAGTACTTTGGTCCTGATTATAATCTCCATATTCAACCCAGAAGTGTGGAGAACCTGAATTCGACTAAAGACCTGGAGAACATAAAGAGCATGATATTGGATCATCTCTCAAAAATTGAGCATGTTCCGAGCACTCAGTTCCATGACAGACCATCAGATCCTGAAGCTCCAGAGCAGGAAGAGGAGGACATGGACAAGAGACCACCTCAGCGCAGTAGGTTATGGAGTGGAGGAGCTTATGAATCTGATACAGAGGATCCTGACAACATGAAAACTGAGACCAATGACTTATCTGCCAGCTCTGTCATGAAGGATGAATCGAATGATGATTCCTAGAAGAGATCCTGCGATTCTGGTTCTCAGCACTCCTGATTTGTACGTGCATGCTGAAGAACAAGGAAAGTATCTGAAGATGTCTGATATCTGCGCCTGACCATTTTGCAAAACAATGAATGCTTTTTTGGGTGCTTCTAACTTTCAAGCATGTCGGTAATTCTGGTTAGTCGGCGGCACATCCTCAAATGGTTTGTGCCAGAGGAGTGTATGCTAGAATGATTCTTGCGCTGATATGGATTTATAGTTCTTTTATGTTCATACTTCTCCGATGTGTTGAACTCATACCGCAGATCCGCAATCAGTTCCCCCTAGCCTGTCCAAACTTATTTTTTGTGGCATTTGAAATCCATCTGAACCGCATTGTCATTCATATTTTGATTAAAGAATGCCTGAAGGGAAAATTAGTTCAAGTGAATTCCCAGCATAGCTGCTGCGGCTGCTTCTTTTTTTTTTTCTTTATTTT
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
