Tag |
Content |
WERAM ID |
WERAM-Lep-0090 |
Ensembl Protein ID |
LPERR08G09660.1 |
Gene Name |
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Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
2.30e-121 |
406.1 |
21 |
282 |
|
Organism |
Leersia perrieri |
Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPv 94 ++v+y+y++++g+y+ygq+hpmkp+r++++h+Lv++ygl++ le+ +p as +++ +fhs++y+ fl + + + ++ +k+fnvgedcPv LPERR08G09660.1 21 RRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLEVSRPYPASDADIRRFHSDDYVAFLASAAGNPSLLDARAIKRFNVGEDCPV 114 589*******************************************************************99999888899************* PP class-1.txt 95 fdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrv 185 fdglf +cq+++G+s+ aa kLn+++adia+nwaGGlhhakk easGfcyvnDivlailellk h+rvly+did+hhGDgveeaf tt+r LPERR08G09660.1 115 FDGLFPFCQASAGGSIGAAVKLNHGDADIAVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNRC 205 ****************************************************************************************995 PP class-1.txt 236 sviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313 +++kv+e+++P++vvlqcGaDslagDrlg+fnls+kgha+c+++++sfn+p++vlGGGGYt+rnvaRcw+yetav++ LPERR08G09660.1 205 CIMKKVMEIYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRYLRSFNIPMMVLGGGGYTIRNVARCWCYETAVAV 282 599************************************************************************986 PP
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Protein Sequence (Fasta) | MAASGEGASL AAAGGEDGRR RRVSYFYEPS IGDYYYGQGH PMKPHRIRMA HSLVVHYGLH 60 RLLEVSRPYP ASDADIRRFH SDDYVAFLAS AAGNPSLLDA RAIKRFNVGE DCPVFDGLFP 120 FCQASAGGSI GAAVKLNHGD ADIAVNWAGG LHHAKKGEAS GFCYVNDIVL AILELLKFHR 180 RVLYVDIDVH HGDGVEEAFF TTNRCIMKKV MEIYQPDVVV LQCGADSLAG DRLGCFNLSV 240 KGHADCLRYL RSFNIPMMVL GGGGYTIRNV ARCWCYETAV AVGVEPDNKL PYNDYYEYFG 300 PDYNLHIQPR SVENLNSAKD LENIKIMILE HLSEIEHVPS TQFHDRPSDP EAPEERPPQR 360 SRLWSGGAYE SDTEDPDHMK IETNDLSASS VMKVLLLCRH ILK 403Protein Fasta Sequence
>LPERR08G09660.1|Class-I|Leersia perrieri MAASGEGASLAAAGGEDGRRRRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLEVSRPYPASDADIRRFHSDDYVAFLASAAGNPSLLDARAIKRFNVGEDCPVFDGLFPFCQASAGGSIGAAVKLNHGDADIAVNWAGGLHHAKKGEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNRCIMKKVMEIYQPDVVVLQCGADSLAGDRLGCFNLSVKGHADCLRYLRSFNIPMMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNDYYEYFGPDYNLHIQPRSVENLNSAKDLENIKIMILEHLSEIEHVPSTQFHDRPSDPEAPEERPPQRSRLWSGGAYESDTEDPDHMKIETNDLSASSVMKVLLLCRHILK
|
Nucleotide Sequence (Fasta) | TGAAAAGTAA ATAAGAGGAG AAAACCATTA AAATCCCTTC TCTCCCTCCA GTCTCCTCCT 60 TTCTTTGCCT GCATTTCCCT ATAAACCCAC TTCTCCAAAC CACAAGGCCG GCCACAAGAC 120 AAGGGGGAAA AAGAAGAGAG AAAGGAGAGG GAAAAAAATG GCGGCATCCG GCGAGGGGGC 180 GTCGCTGGCG GCGGCGGGCG GCGAGGACGG ACGGCGGCGG AGGGTGAGCT ACTTCTACGA 240 GCCGTCGATC GGCGACTACT ACTACGGGCA GGGGCACCCG ATGAAGCCGC ACCGCATCCG 300 CATGGCGCAC TCGCTGGTGG TCCACTACGG CCTCCACCGC CTGCTCGAGG TGTCCCGCCC 360 CTACCCGGCC TCCGACGCCG ACATCCGCCG CTTCCACTCC GACGACTACG TCGCCTTCCT 420 CGCCTCCGCC GCAGGCAACC CCTCCCTCCT CGACGCCCGC GCCATCAAGC GCTTCAACGT 480 CGGCGAGGAC TGCCCTGTCT TCGACGGCCT CTTCCCCTTC TGCCAGGCCT CCGCGGGGGG 540 AAGCATCGGC GCCGCCGTCA AGCTCAACCA CGGCGACGCC GACATCGCCG TCAACTGGGC 600 CGGCGGCCTC CACCATGCCA AGAAGGGGGA GGCCTCCGGC TTCTGCTACG TCAACGACAT 660 CGTCCTCGCC ATCCTCGAGC TCCTCAAGTT CCACAGGCGT GTGCTATATG TAGACATTGA 720 TGTCCACCAT GGAGATGGTG TGGAGGAAGC TTTCTTCACT ACAAATCGAT GCATCATGAA 780 AAAGGTAATG GAGATTTATC AGCCAGATGT AGTTGTTCTC CAGTGTGGAG CCGACTCTTT 840 GGCTGGAGAC AGGTTAGGTT GCTTCAACCT GTCTGTGAAA GGTCATGCAG ACTGCCTCCG 900 TTACCTTAGG TCTTTCAATA TTCCTATGAT GGTTTTAGGA GGTGGGGGTT ACACCATCAG 960 AAATGTTGCT CGCTGCTGGT GCTATGAGAC TGCAGTTGCT GTTGGAGTTG AACCTGATAA 1020 CAAATTACCT TATAATGACT ACTATGAGTA CTTTGGTCCT GACTATAACC TTCATATTCA 1080 ACCCAGAAGT GTGGAGAATC TGAATTCAGC TAAAGACTTG GAGAACATTA AGATCATGAT 1140 ATTGGAGCAT CTCTCAGAAA TAGAGCATGT TCCAAGCACT CAGTTCCATG ACAGACCATC 1200 AGATCCTGAA GCTCCCGAGG AGAGACCACC TCAGCGCAGT AGATTATGGA GTGGAGGAGC 1260 TTATGAGTCT GATACAGAGG ATCCTGACCA CATGAAAATC GAGACCAATG ACTTGTCTGC 1320 TAGCTCTGTC ATGAAGGTAC TTCTGCTTTG TCGGCACATC CTCAAATGAT TTGTGCCAGA 1380 CAGAAGTGTA TGCTGGAATG ATTTGTTTGG TGTCATGGAT TTCATGTTTA TAGTGCTCCT 1440 TTGTGTTGAA CTCGGGCCAT AAATCCGCAA TCAGTACCCC TATACTGCCT AGACTAATTT 1500 TATGGCATTT CTCCTTCCTG AACGCATTGT CATTCATATT AGTTCAAGTG AAACTACAGA 1560 GTTTACCATT CTAATCAAGG CACATTTTCC GCTAGCAGTT GCCTACTTAA ATCCGTTTGG 1620 AATTTGCTAT TTTTCTGGCA AGATTCGAAA ACCAAAATTC AAATTGAAAA CCACAGTTTG 1680 CATTGGAAGG CTGTGGAAAT TCGGTCGGTC CTACTGAAAT TTTGACAGTT AAACAACAGC 1740 TTTCGAGAAA AAAAACATTT GCTGGTCCAA TTTCGTTTGC AATTACTCTA AATTCATGTA 1800 AAATTATCAA AAAATTGAAG CCAGA
1826Nucleotide Fasta Sequence
>LPERR08G09660.1|Class-I|Leersia perrieri TGAAAAGTAAATAAGAGGAGAAAACCATTAAAATCCCTTCTCTCCCTCCAGTCTCCTCCTTTCTTTGCCTGCATTTCCCTATAAACCCACTTCTCCAAACCACAAGGCCGGCCACAAGACAAGGGGGAAAAAGAAGAGAGAAAGGAGAGGGAAAAAAATGGCGGCATCCGGCGAGGGGGCGTCGCTGGCGGCGGCGGGCGGCGAGGACGGACGGCGGCGGAGGGTGAGCTACTTCTACGAGCCGTCGATCGGCGACTACTACTACGGGCAGGGGCACCCGATGAAGCCGCACCGCATCCGCATGGCGCACTCGCTGGTGGTCCACTACGGCCTCCACCGCCTGCTCGAGGTGTCCCGCCCCTACCCGGCCTCCGACGCCGACATCCGCCGCTTCCACTCCGACGACTACGTCGCCTTCCTCGCCTCCGCCGCAGGCAACCCCTCCCTCCTCGACGCCCGCGCCATCAAGCGCTTCAACGTCGGCGAGGACTGCCCTGTCTTCGACGGCCTCTTCCCCTTCTGCCAGGCCTCCGCGGGGGGAAGCATCGGCGCCGCCGTCAAGCTCAACCACGGCGACGCCGACATCGCCGTCAACTGGGCCGGCGGCCTCCACCATGCCAAGAAGGGGGAGGCCTCCGGCTTCTGCTACGTCAACGACATCGTCCTCGCCATCCTCGAGCTCCTCAAGTTCCACAGGCGTGTGCTATATGTAGACATTGATGTCCACCATGGAGATGGTGTGGAGGAAGCTTTCTTCACTACAAATCGATGCATCATGAAAAAGGTAATGGAGATTTATCAGCCAGATGTAGTTGTTCTCCAGTGTGGAGCCGACTCTTTGGCTGGAGACAGGTTAGGTTGCTTCAACCTGTCTGTGAAAGGTCATGCAGACTGCCTCCGTTACCTTAGGTCTTTCAATATTCCTATGATGGTTTTAGGAGGTGGGGGTTACACCATCAGAAATGTTGCTCGCTGCTGGTGCTATGAGACTGCAGTTGCTGTTGGAGTTGAACCTGATAACAAATTACCTTATAATGACTACTATGAGTACTTTGGTCCTGACTATAACCTTCATATTCAACCCAGAAGTGTGGAGAATCTGAATTCAGCTAAAGACTTGGAGAACATTAAGATCATGATATTGGAGCATCTCTCAGAAATAGAGCATGTTCCAAGCACTCAGTTCCATGACAGACCATCAGATCCTGAAGCTCCCGAGGAGAGACCACCTCAGCGCAGTAGATTATGGAGTGGAGGAGCTTATGAGTCTGATACAGAGGATCCTGACCACATGAAAATCGAGACCAATGACTTGTCTGCTAGCTCTGTCATGAAGGTACTTCTGCTTTGTCGGCACATCCTCAAATGATTTGTGCCAGACAGAAGTGTATGCTGGAATGATTTGTTTGGTGTCATGGATTTCATGTTTATAGTGCTCCTTTGTGTTGAACTCGGGCCATAAATCCGCAATCAGTACCCCTATACTGCCTAGACTAATTTTATGGCATTTCTCCTTCCTGAACGCATTGTCATTCATATTAGTTCAAGTGAAACTACAGAGTTTACCATTCTAATCAAGGCACATTTTCCGCTAGCAGTTGCCTACTTAAATCCGTTTGGAATTTGCTATTTTTCTGGCAAGATTCGAAAACCAAAATTCAAATTGAAAACCACAGTTTGCATTGGAAGGCTGTGGAAATTCGGTCGGTCCTACTGAAATTTTGACAGTTAAACAACAGCTTTCGAGAAAAAAAACATTTGCTGGTCCAATTTCGTTTGCAATTACTCTAAATTCATGTAAAATTATCAAAAAATTGAAGCCAGA
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Sequence Source |
Ensembl |
Orthology |
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Created Date |
25-Jun-2016 |