Tag |
Content |
WERAM ID |
WERAM-Mua-0044 |
Ensembl Protein ID |
GSMUA_Achr2P06520_001 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
9.50e-135 |
450 |
1 |
256 |
|
Organism |
Musa acuminata |
Domain Profile |
HDAC Class-I
class-1.txt 43 leivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakkLnkkeadiainwaGG 130 +e+ +p asa+++ +fhs++y++fl ++fnvgedcPvfdglfe+cq+++G+s+ aa k+n+++adiainwaGG GSMUA_Achr2P06520_001 1 MEVSRPFPASAADIRRFHSDDYVDFLA--------------SRFNVGEDCPVFDGLFEFCQASAGGSIGAAVKINRGDADIAINWAGG 74 89999********************96..............48********************************************* PP class-1.txt 131 lhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavn 218 lhhakk+easGfcyvnDivl+ilellk+h+rvly+did+hhGDgveeaf ttdrvmtvsfhkyg+ ffPgtG+++dvg ++gkyya+n GSMUA_Achr2P06520_001 75 LHHAKKCEASGFCYVNDIVLGILELLKYHRRVLYVDIDIHHGDGVEEAFFTTDRVMTVSFHKYGD-FFPGTGHIKDVGFGQGKYYALN 161 *****************************************************************.********************** PP class-1.txt 219 vPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwt 306 vPl+dg+dDes++ +f+++i+kv+ +++P+avvlqcGaDslagDrlg+fnls+kgha+c+++++sfn+p+lvlGGGGYt+rnvaRcw+ GSMUA_Achr2P06520_001 162 VPLNDGMDDESFRGLFRPIIQKVMAVYQPDAVVLQCGADSLAGDRLGCFNLSVKGHADCLRYLRSFNVPMLVLGGGGYTMRNVARCWC 249 **************************************************************************************** PP class-1.txt 307 yetavvl 313 yetav++ GSMUA_Achr2P06520_001 250 YETAVAI 256 ****975 PP
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Protein Sequence (Fasta) | MEVSRPFPAS AADIRRFHSD DYVDFLASRF NVGEDCPVFD GLFEFCQASA GGSIGAAVKI 60 NRGDADIAIN WAGGLHHAKK CEASGFCYVN DIVLGILELL KYHRRVLYVD IDIHHGDGVE 120 EAFFTTDRVM TVSFHKYGDF FPGTGHIKDV GFGQGKYYAL NVPLNDGMDD ESFRGLFRPI 180 IQKVMAVYQP DAVVLQCGAD SLAGDRLGCF NLSVKGHADC LRYLRSFNVP MLVLGGGGYT 240 MRNVARCWCY ETAVAIGVEP DNQLPYNEYY EYFGPDYDLH IRPRSMENKN SPKELEDIRN 300 MLMDYLSKIE HAPSVQFQSR PPDTEAPEEE DEDMEHRMQP KLWSGEYYDS DSEECPKPEP 360 ESVP 364Protein Fasta Sequence
>GSMUA_Achr2P06520_001|Class-I|Musa acuminata MEVSRPFPASAADIRRFHSDDYVDFLASRFNVGEDCPVFDGLFEFCQASAGGSIGAAVKINRGDADIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLKYHRRVLYVDIDIHHGDGVEEAFFTTDRVMTVSFHKYGDFFPGTGHIKDVGFGQGKYYALNVPLNDGMDDESFRGLFRPIIQKVMAVYQPDAVVLQCGADSLAGDRLGCFNLSVKGHADCLRYLRSFNVPMLVLGGGGYTMRNVARCWCYETAVAIGVEPDNQLPYNEYYEYFGPDYDLHIRPRSMENKNSPKELEDIRNMLMDYLSKIEHAPSVQFQSRPPDTEAPEEEDEDMEHRMQPKLWSGEYYDSDSEECPKPEPESVP
|
Nucleotide Sequence (Fasta) | GGCGGCGGCG GGGAGGGGGC GTCGCTGGCG TCGGCGTCGT GCGTGGACGG GGGAAGGCGG 60 CGGGTGAGCT ACTTCTACGA GCCGACCATC GGGGACTACT ACTACGGGCA GGGGCACCCG 120 ATGAAGCCCC ACCGTATCCG CATGGCCCAC AACCTCGTCG TCCACTACGC CCTCCACCGC 180 CTCATGGAGG TCTCCCGCCC TTTCCCCGCC TCCGCCGCCG ACATCCGCCG CTTCCATTCC 240 GACGACTACG TCGACTTCCT CGCCTCCCGC TTCAACGTCG GAGAGGACTG CCCCGTCTTC 300 GATGGCCTCT TCGAGTTCTG TCAGGCCTCC GCCGGCGGCT CCATCGGGGC CGCCGTCAAG 360 ATCAACCGCG GCGACGCCGA CATCGCCATC AATTGGGCCG GCGGCCTCCA CCATGCCAAG 420 AAGTGCGAGG CTTCTGGCTT CTGCTACGTC AACGACATCG TCCTCGGCAT CCTCGAGCTC 480 CTCAAGTACC ACAGGCGTGT TCTCTATGTG GACATTGATA TCCATCATGG AGATGGTGTT 540 GAAGAGGCAT TTTTCACGAC TGACAGAGTC ATGACTGTGT CCTTCCACAA ATATGGGGAC 600 TTCTTTCCTG GAACTGGCCA TATAAAGGAC GTCGGATTTG GGCAAGGAAA GTACTATGCT 660 CTAAATGTTC CTCTAAATGA TGGGATGGAT GATGAGAGTT TTCGGGGGCT TTTTAGGCCT 720 ATCATCCAAA AGGTGATGGC AGTTTATCAG CCTGATGCTG TTGTTCTCCA GTGTGGTGCT 780 GATTCTTTGG CGGGAGACAG ACTAGGTTGC TTTAACTTGT CTGTGAAGGG GCATGCAGAT 840 TGTCTACGAT ACCTTAGATC CTTCAATGTA CCAATGTTGG TTCTGGGAGG TGGAGGCTAT 900 ACAATGCGCA ATGTTGCTCG CTGCTGGTGC TATGAGACAG CAGTTGCAAT TGGAGTGGAA 960 CCTGACAATC AGTTGCCTTA CAATGAATAC TACGAGTATT TTGGTCCTGA CTATGATCTT 1020 CATATTCGAC CAAGAAGCAT GGAGAATAAA AATTCACCAA AGGAACTGGA GGACATTAGG 1080 AATATGTTAA TGGATTACCT TTCGAAAATT GAACATGCTC CTAGTGTGCA GTTCCAGTCA 1140 AGACCACCTG ATACAGAAGC TCCTGAGGAG GAAGATGAGG ATATGGAGCA CAGGATGCAA 1200 CCAAAACTAT GGAGTGGCGA GTATTATGAT TCTGACTCTG AGGAGTGCCC GAAGCCTGAA 1260 CCTGAAAGTG TACCATGATC AATTAACCGT CAACAGACTC TACTGTTTAG GATGTCATAA 1320 ATTATGTAGC AGATGAGTTG ACCAAGCACC TCAAAATTAG TGTTCTATGT CGATTTTTAT 1380 CGAGCAAGTA CGTCATCTTA TTTGACATTA ATGCTCATCG CCGTCGTTAG AGCCAGAATG 1440 CCTTCCTTGG GGGTTAAAAT CAGAGTGAGA AACAAGCTTG TTGTTGCTCA AAATGGGATA 1500 CCATCAAGCT CATTGTTGAT TAGTGAGGAA TGTTATGAAC ACAAAGATGT GTATTCATTT 1560 GCGCCAACTT TTCTTCTTTG AGATAGTAGA ACTCTGTCAA GATTTA
1607Nucleotide Fasta Sequence
>GSMUA_Achr2P06520_001|Class-I|Musa acuminata GGCGGCGGCGGGGAGGGGGCGTCGCTGGCGTCGGCGTCGTGCGTGGACGGGGGAAGGCGGCGGGTGAGCTACTTCTACGAGCCGACCATCGGGGACTACTACTACGGGCAGGGGCACCCGATGAAGCCCCACCGTATCCGCATGGCCCACAACCTCGTCGTCCACTACGCCCTCCACCGCCTCATGGAGGTCTCCCGCCCTTTCCCCGCCTCCGCCGCCGACATCCGCCGCTTCCATTCCGACGACTACGTCGACTTCCTCGCCTCCCGCTTCAACGTCGGAGAGGACTGCCCCGTCTTCGATGGCCTCTTCGAGTTCTGTCAGGCCTCCGCCGGCGGCTCCATCGGGGCCGCCGTCAAGATCAACCGCGGCGACGCCGACATCGCCATCAATTGGGCCGGCGGCCTCCACCATGCCAAGAAGTGCGAGGCTTCTGGCTTCTGCTACGTCAACGACATCGTCCTCGGCATCCTCGAGCTCCTCAAGTACCACAGGCGTGTTCTCTATGTGGACATTGATATCCATCATGGAGATGGTGTTGAAGAGGCATTTTTCACGACTGACAGAGTCATGACTGTGTCCTTCCACAAATATGGGGACTTCTTTCCTGGAACTGGCCATATAAAGGACGTCGGATTTGGGCAAGGAAAGTACTATGCTCTAAATGTTCCTCTAAATGATGGGATGGATGATGAGAGTTTTCGGGGGCTTTTTAGGCCTATCATCCAAAAGGTGATGGCAGTTTATCAGCCTGATGCTGTTGTTCTCCAGTGTGGTGCTGATTCTTTGGCGGGAGACAGACTAGGTTGCTTTAACTTGTCTGTGAAGGGGCATGCAGATTGTCTACGATACCTTAGATCCTTCAATGTACCAATGTTGGTTCTGGGAGGTGGAGGCTATACAATGCGCAATGTTGCTCGCTGCTGGTGCTATGAGACAGCAGTTGCAATTGGAGTGGAACCTGACAATCAGTTGCCTTACAATGAATACTACGAGTATTTTGGTCCTGACTATGATCTTCATATTCGACCAAGAAGCATGGAGAATAAAAATTCACCAAAGGAACTGGAGGACATTAGGAATATGTTAATGGATTACCTTTCGAAAATTGAACATGCTCCTAGTGTGCAGTTCCAGTCAAGACCACCTGATACAGAAGCTCCTGAGGAGGAAGATGAGGATATGGAGCACAGGATGCAACCAAAACTATGGAGTGGCGAGTATTATGATTCTGACTCTGAGGAGTGCCCGAAGCCTGAACCTGAAAGTGTACCATGATCAATTAACCGTCAACAGACTCTACTGTTTAGGATGTCATAAATTATGTAGCAGATGAGTTGACCAAGCACCTCAAAATTAGTGTTCTATGTCGATTTTTATCGAGCAAGTACGTCATCTTATTTGACATTAATGCTCATCGCCGTCGTTAGAGCCAGAATGCCTTCCTTGGGGGTTAAAATCAGAGTGAGAAACAAGCTTGTTGTTGCTCAAAATGGGATACCATCAAGCTCATTGTTGATTAGTGAGGAATGTTATGAACACAAAGATGTGTATTCATTTGCGCCAACTTTTCTTCTTTGAGATAGTAGAACTCTGTCAAGATTTA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |