WERAM Information

Tag Content
WERAM ID WERAM-Zem-0097
Ensembl Protein ID GRMZM2G172001_P02
Gene Name LOC100283247 ZEAMMB73_780674
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM2G172001 GRMZM2G172001_T02 GRMZM2G172001_P02
GRMZM2G172001 GRMZM2G172001_T03 GRMZM2G172001_P03
GRMZM2G172001 GRMZM2G172001_T04 GRMZM2G172001_P04
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.50e-12 47.9 200 250
Organism Zea mays
Domain Profile
  Me_Reader PHD
            PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                        t+C +Cg++d +++++++Cd+C++w+H+kCvk++  +++  k++ Cp C++
  GRMZM2G172001_P02 200 TLCGTCGTNDSKDQFWICCDNCEKWYHGKCVKITPARAEHIKQYKCPDCTN 250
                        78****99999999********************666664479******97 PP
Protein Sequence
(Fasta)		MNGGGSGLAP NAAHTADEVF RDYKGRRAGM IKALTTDVER FFKLCDPEKE NLCLYGYPDE 60
TWEVTLPAEE VPPEIPEPAL GINFARDGMN EKDWLALVAV HSDSWLLSVA FYFGARFGFD 120
RETRRRLFSL INNMPTIFEV VTGAAKKQAK EKTPNSSSKS NRPSSKVSRA ESRSKAKVPQ 180
DEEESGDDDE DEEADEHNNT LCGTCGTNDS KDQFWICCDN CEKWYHGKCV KITPARAEHI 240
KQYKCPDCTN KRARA 255
Nucleotide Sequence
(Fasta)		CATGGAGCAC CCACGCATGG ATCAAAATCC TCCCCCAAAA CGCGACGAAA TTCTCCGCGA 60
GCAAAATATA AAGTTTATAA ACCCACTCCT CCCCTTCCCC TGTTCCCTCT ACCACCACCA 120
CCGGCACCGC GGGACAGTCT GCTCTCGTCC CGCTGCAGCC CGTCCCCGAC CCGGAACCCT 180
AGCGACTGCC ATTGCCCACG CGCCGCTCGC CCGATGAACG GCGGGGGCTC TGGGCTGGCG 240
CCCAACGCCG CGCACACCGC GGACGAGGTC TTCCGCGACT ACAAAGGCCG CCGCGCCGGC 300
ATGATCAAGG CCCTCACCAC TGATGTGGAG AGGTTCTTCA AACTCTGTGA CCCTGAAAAG 360
GAGAACTTGT GCCTTTATGG CTATCCCGAT GAGACGTGGG AGGTGACCTT GCCAGCTGAG 420
GAAGTTCCCC CTGAGATCCC TGAACCAGCA TTAGGAATCA ACTTTGCTAG GGATGGCATG 480
AATGAGAAAG ACTGGCTGGC GCTAGTTGCA GTCCACAGTG ATTCCTGGTT ACTGTCTGTT 540
GCATTCTACT TTGGTGCACG CTTTGGATTT GACAGAGAAA CTAGGAGGCG ACTCTTTAGC 600
CTGATAAACA ACATGCCCAC GATATTTGAG GTAGTGACAG GAGCAGCCAA GAAGCAGGCG 660
AAGGAGAAGA CACCTAATAG TAGCAGCAAG AGCAACAGGC CTAGTTCAAA AGTGTCAAGA 720
GCAGAGTCTC GTTCAAAGGC TAAGGTCCCC CAAGACGAAG AAGAGAGCGG TGATGACGAT 780
GAGGATGAGG AGGCAGACGA GCACAACAAT ACCTTGTGTG GAACTTGCGG AACTAACGAC 840
AGCAAGGACC AGTTCTGGAT CTGTTGTGAT AACTGCGAGA AGTGGTACCA TGGGAAGTGT 900
GTCAAGATCA CGCCAGCTCG AGCTGAGCAT ATCAAGCAGT ACAAGTGCCC AGACTGCACC 960
AACAAGCGGG CCAGGGCATG AGCGGCAAAC ATCGGCATCG GGCGACCTTT GATAGGAAGG 1020
AAGAAACCAC CTCCTGGCTT CAAGATCCCT AGATATGGCG TAGGTCCCTA GTTTACGAAG 1080
TCTGCATTTT CATGTGTTCA TTAATATATC TGCTGATTAG CTGTTCGACC TAGCAGTGTC 1140
TAAAACGTGC CGTGTGTCTT CTGTGCTGAG TGTTGACATG GGGCCTCCTC CCTCCAGCCT 1200
GTAAACGCTG TCACTGAAGG TACCTCTCAA CTGACCATCC TTCATTGTTG GTGTCGTGCA 1260
GTGAGTAGTG GCCGTACTCT TTGTTCCCAG TTCCTAGCAT TTGAATTGCT CAAATGCGTA 1320
CCTTGCTGAG TAAGGCCGTT GGAAAATGAC GAATAGCTGC ATTTCCGTG
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0057 Sb03g042180.1 Sorghum bicolor 90 2e-112 402
WERAM-Sei-0012 Si002638m Setaria italica 87 2e-109 392
WERAM-Ors-0008 OS01T0887700-01 Oryza sativa 84 1e-102 369
WERAM-Orr-0011 ORUFI01G43190.1 Oryza rufipogon 84 1e-102 369
WERAM-Orp-0013 OPUNC01G38560.1 Oryza punctata 84 1e-102 369
WERAM-Orni-0011 ONIVA01G44710.1 Oryza nivara 84 1e-102 369
WERAM-Orm-0013 OMERI01G36760.1 Oryza meridionalis 84 1e-102 369
WERAM-Orgl-0011 OGLUM01G44060.1 Oryza glumaepatula 84 1e-102 369
WERAM-Org-0012 ORGLA01G0337500.1 Oryza glaberrima 84 1e-102 369
WERAM-Orb-0011 OBART01G39820.1 Oryza barthii 84 1e-102 369
WERAM-Ori-0001 BGIOSGA000361-PA Oryza indica 84 4e-102 367
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 75 4e-96 348
WERAM-Lep-0015 LPERR01G34320.1 Leersia perrieri 80 7e-95 343
WERAM-Aet-0106 EMT19247 Aegilops tauschii 74 1e-94 342
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 73 2e-94 342
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 81 5e-94 340
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 85 4e-93 338
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 72 4e-91 331
WERAM-Orbr-0016 OB01G48580.1 Oryza brachyantha 81 6e-91 330
WERAM-Thc-0077 EOY27191 Theobroma cacao 68 3e-86 315
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 69 2e-85 312
WERAM-Amt-0088 ERM99796 Amborella trichopoda 67 8e-85 310
WERAM-Glm-0158 GLYMA13G16740.1 Glycine max 67 9e-85 310
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 69 4e-84 308
WERAM-Prp-0082 EMJ27202 Prunus persica 69 4e-83 305
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 67 4e-81 298
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 65 2e-80 296
WERAM-Met-0013 KEH39913 Medicago truncatula 63 2e-80 295
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 64 2e-80 295
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 65 3e-80 295
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 64 2e-78 289
WERAM-Bro-0027 Bo2g021880.1 Brassica oleracea 62 4e-77 285
WERAM-Php-0091 PP1S38_137V6.1 Physcomitrella patens 62 9e-75 276
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 61 1e-70 263
Created Date 25-Jun-2016