WERAM Information

Tag Content
WERAM ID WERAM-Zem-0077
Ensembl Protein ID GRMZM2G136067_P01
Gene Name hda108 ZEAMMB73_071894
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM2G136067 GRMZM2G136067_T01 GRMZM2G136067_P01
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 7.70e-155 516.8 22 333
Organism Zea mays
Domain Profile
  HDAC Class-I
        class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedc 92 
                        ++v+y+y++++g+y+ygq+hpmkp+r++++h+Lv++ygl++ le+ +p  as +++ +fhs++y+ fl + + +     ++ +k+fnvgedc
  GRMZM2G136067_P01  22 RRVSYFYEPSIGDYYYGQGHPMKPHRIRMAHSLVVHYGLHRLLELSRPYPASEADIRRFHSDDYVAFLASATGNPGVLDPRAIKRFNVGEDC 113
                        589*********************************************************************99999999************ PP
        class-1.txt  93 PvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdr 184
                        Pvfdglf +cq+++G+s+ aa kLn+++adi++nwaGGlhhakkseasGfcyvnDivlailellk h+rvly+did+hhGDgveeaf tt+r
  GRMZM2G136067_P01 114 PVFDGLFPFCQASAGGSIGAAVKLNRGDADITVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKFHRRVLYVDIDVHHGDGVEEAFFTTNR 205
                        ******************************************************************************************** PP
        class-1.txt 185 vmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae 276
                        vmtvsfhkyg+ ffPgtG+++dvga +gk+ya+nvPl+dgidD++++ +f+ +i+kv+e+++P++vvlqcGaDslagDrlg+fnls+kgha+
  GRMZM2G136067_P01 206 VMTVSFHKYGD-FFPGTGHITDVGAAEGKHYALNVPLSDGIDDTTFRGLFQCIIKKVMEVYQPDVVVLQCGADSLAGDRLGCFNLSVKGHAD 296
                        ***********.******************************************************************************** PP
        class-1.txt 277 cvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                        c++f++s+n+p++vlGGGGYt+rnvaRcw+yetav++
  GRMZM2G136067_P01 297 CLRFLRSYNVPMMVLGGGGYTIRNVARCWCYETAVAV 333
                        **********************************986 PP
Protein Sequence
(Fasta)		MAASGEGASL PSPAGGEDAH RRRVSYFYEP SIGDYYYGQG HPMKPHRIRM AHSLVVHYGL 60
HRLLELSRPY PASEADIRRF HSDDYVAFLA SATGNPGVLD PRAIKRFNVG EDCPVFDGLF 120
PFCQASAGGS IGAAVKLNRG DADITVNWAG GLHHAKKSEA SGFCYVNDIV LAILELLKFH 180
RRVLYVDIDV HHGDGVEEAF FTTNRVMTVS FHKYGDFFPG TGHITDVGAA EGKHYALNVP 240
LSDGIDDTTF RGLFQCIIKK VMEVYQPDVV VLQCGADSLA GDRLGCFNLS VKGHADCLRF 300
LRSYNVPMMV LGGGGYTIRN VARCWCYETA VAVGVEPDNK LPYNDYYEYF GPDYTLHIQP 360
KSVENLNTTK DLENIKNMIL ENLSKIEHVP STQFHDRPSD PEAPEEKEED MDKRPPQRSR 420
LWSGGAYDSD TEDPDSLKSE GKDVTANFQM KDEPKDDL 458
Nucleotide Sequence
(Fasta)		GCCTAAACCC CGAAATTATA AAGAAAACCG CCTCGGCCGC AACTTGACTA TCTTTGTGAG 60
GACCTTCAAC CATCTCAGGC GGAATGGCGG CTTCTGGTGA GGGCGCGTCG CTGCCGTCTC 120
CGGCGGGCGG GGAGGATGCG CACCGCCGCC GCGTCAGCTA TTTCTACGAG CCGTCGATCG 180
GAGACTACTA CTACGGGCAA GGTCACCCGA TGAAGCCCCA CCGCATCCGA ATGGCGCACT 240
CGCTGGTGGT CCACTACGGC CTCCACCGCC TCCTCGAGCT CTCCCGCCCC TACCCGGCCT 300
CTGAGGCCGA CATCCGCCGC TTCCACTCCG ACGACTACGT CGCTTTCCTC GCGTCCGCCA 360
CCGGAAACCC GGGTGTCCTC GACCCGCGCG CCATTAAGCG CTTTAACGTC GGTGAGGACT 420
GCCCCGTGTT CGACGGTCTC TTCCCCTTCT GCCAGGCCTC CGCTGGGGGA AGCATCGGCG 480
CCGCCGTCAA GCTTAACCGC GGGGACGCCG ACATCACCGT CAACTGGGCG GGCGGCCTCC 540
ACCACGCCAA GAAGAGCGAG GCCTCCGGGT TCTGCTACGT CAACGACATC GTCCTCGCCA 600
TCCTCGAGCT CCTCAAGTTC CACAGGCGTG TGCTATATGT AGACATTGAT GTCCACCATG 660
GAGATGGCGT GGAGGAGGCC TTCTTCACTA CAAACCGAGT CATGACTGTT TCCTTTCACA 720
AGTATGGGGA TTTTTTCCCT GGTACTGGAC ATATCACTGA CGTTGGGGCA GCCGAAGGGA 780
AGCATTATGC TCTGAATGTT CCCCTGAGTG ATGGTATCGA TGACACCACC TTTCGTGGTC 840
TGTTTCAATG CATCATTAAG AAAGTTATGG AGGTTTATCA GCCAGACGTG GTTGTCCTCC 900
AATGCGGAGC TGACTCTTTG GCTGGAGACA GGTTAGGTTG CTTCAACCTG TCTGTGAAGG 960
GTCATGCTGA CTGCCTCCGT TTCCTTAGGT CGTACAATGT TCCTATGATG GTTTTAGGTG 1020
GTGGAGGTTA CACCATCAGA AATGTTGCAC GCTGCTGGTG CTACGAGACC GCAGTTGCTG 1080
TTGGAGTTGA ACCTGATAAC AAGCTGCCTT ACAATGATTA CTATGAGTAC TTTGGCCCTG 1140
ATTATACTCT TCATATCCAA CCAAAAAGTG TTGAAAACCT GAATACCACA AAGGACTTGG 1200
AGAACATAAA GAACATGATA TTGGAGAACC TGTCAAAGAT AGAACATGTT CCCAGCACTC 1260
AATTCCATGA CAGACCGTCA GACCCTGAAG CTCCAGAGGA GAAAGAGGAG GACATGGACA 1320
AGAGGCCACC TCAGCGCAGC AGATTATGGA GCGGAGGAGC TTACGACTCT GATACAGAGG 1380
ATCCTGACAG CCTGAAAAGC GAGGGTAAAG ACGTAACTGC TAACTTCCAG ATGAAGGATG 1440
AACCAAAAGA TGATCTGTAG AAGTTTCAGA AGTGCCCCCA AAGTTACTGA GTTGTGAATG 1500
GGATCGTCGA CATGCATGTT GAAGAGTGGG GACGCATCTG AACCTGTCCG TGCTGATATC 1560
TGCCGCTGTG CATCTGTAAC AGACTGAACG TTTTGCTGGT TCCAGCTTTC CTGCGTGTTG 1620
GTAACTAGAC TAGATATATG GCCCTTTGGT GGGTCCCAAA CTGTTGAGCT GGAGAAATGA 1680
AGTGATTATT CTCGCATGAT TTTGTAGCAT GCATGTAATC ATTACCCATT AGTTCATTAG 1740
GCTATCAACA GTAGTTTACT CATCCCCATA TTCAAACTTC ACTATGTGCG CAAACAGTGA 1800
TTTGATTGAC CATATGATTA AACTTTGAAG ATGGTCTTTG GGTAGTGTTT GGTTTCAAAG 1860
TGTAATGGGA TGGAGCCGCT CCGCTCTTAA TT 1893
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0102 Sb07g018230.1 Sorghum bicolor 97 0.0 930
WERAM-Sei-0051 Si013709m Setaria italica 95 0.0 919
WERAM-Ors-0081 OS08T0344100-01 Oryza sativa 92 0.0 883
WERAM-Orp-0087 OPUNC08G10650.1 Oryza punctata 92 0.0 883
WERAM-Orm-0085 OMERI08G09730.1 Oryza meridionalis 92 0.0 883
WERAM-Ori-0098 BGIOSGA028498-PA Oryza indica 92 0.0 883
WERAM-Orgl-0088 OGLUM08G12440.1 Oryza glumaepatula 92 0.0 883
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 92 0.0 883
WERAM-Orr-0094 ORUFI08G12880.1 Oryza rufipogon 91 0.0 882
WERAM-Tra-0274 Traes_6DS_08E9A4EDB.1 Triticum aestivum 91 0.0 881
WERAM-Orbr-0098 OB08G20020.1 Oryza brachyantha 91 0.0 880
WERAM-Brd-0077 BRADI3G22370.1 Brachypodium distachyon 91 0.0 877
WERAM-Hov-0020 MLOC_17056.1 Hordeum vulgare 90 0.0 873
WERAM-Orni-0044 ONIVA04G29040.1 Oryza nivara 82 0.0 766
WERAM-Lep-0090 LPERR08G09660.1 Leersia perrieri 79 0.0 719
WERAM-Thc-0029 EOY20838 Theobroma cacao 74 0.0 718
WERAM-Glm-0223 GLYMA17G09320.1 Glycine max 73 0.0 695
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 76 0.0 694
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 74 0.0 687
WERAM-Met-0068 AES71453 Medicago truncatula 72 0.0 687
WERAM-Orb-0091 OBART08G11650.1 Oryza barthii 92 0.0 684
WERAM-Sol-0082 Solyc06g071680.2.1 Solanum lycopersicum 73 0.0 684
WERAM-Prp-0060 EMJ10303 Prunus persica 73 0.0 676
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 73 0.0 665
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 73 0.0 665
WERAM-Bro-0056 Bo3g104750.1 Brassica oleracea 74 0.0 662
WERAM-Brr-0193 Bra038607.1-P Brassica rapa 73 0.0 654
WERAM-Amt-0082 ERN02510 Amborella trichopoda 72 0.0 634
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 66 5e-180 627
WERAM-Sot-0084 PGSC0003DMT400069418 Solanum tuberosum 80 9e-179 623
WERAM-Mua-0044 GSMUA_Achr2P06520_001 Musa acuminata 78 1e-173 606
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 69 8e-169 590
WERAM-Aet-0051 EMT16627 Aegilops tauschii 66 4e-161 565
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 64 3e-157 552
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 64 3e-157 551
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 64 4e-157 551
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 64 6e-157 551
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 64 7e-157 550
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 64 9e-157 550
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 64 9e-157 550
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 64 9e-157 550
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 64 1e-156 550
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 64 1e-156 550
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 64 2e-156 550
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 63 2e-156 549
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 63 2e-156 549
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 63 2e-156 549
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 63 3e-156 549
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 63 3e-156 549
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 63 4e-156 548
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 64 5e-156 548
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 64 2e-155 546
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 63 3e-155 545
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 64 4e-155 545
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 63 8e-155 544
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 62 8e-154 541
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 62 9e-154 540
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 64 9e-154 540
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 63 1e-153 540
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 64 6e-153 538
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 64 8e-153 537
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 63 2e-152 536
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 63 3e-152 535
WERAM-Orn-0087 ENSONIP00000009730.1 Oreochromis niloticus 62 5e-152 535
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 61 9e-152 534
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 62 1e-151 533
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 59 1e-151 533
WERAM-Pof-0067 ENSPFOP00000005770.2 Poecilia formosa 62 1e-151 533
WERAM-Tru-0093 TRIUR3_32991-P1 Triticum urartu 93 2e-151 532
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 62 3e-151 532
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 62 3e-151 532
WERAM-Orla-0151 ENSORLP00000017757.1 Oryzias latipes 61 4e-151 531
WERAM-Tar-0126 ENSTRUP00000027023.1 Takifugu rubripes 58 4e-151 531
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 58 9e-151 530
WERAM-Xim-0002 ENSXMAP00000000390.1 Xiphophorus maculatus 61 1e-150 530
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 60 2e-150 529
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 61 5e-150 528
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 63 5e-150 528
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 61 5e-150 528
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 61 5e-150 528
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 61 5e-150 528
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 58 7e-150 527
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 58 7e-150 527
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 58 8e-150 527
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 63 6e-149 525
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 60 7e-149 524
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 60 2e-148 523
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 57 3e-148 522
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 60 2e-147 519
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 58 2e-147 519
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 62 3e-147 519
WERAM-Coi-0024 EAS33504 Coccidioides immitis 59 3e-147 519
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 58 3e-147 518
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 62 4e-147 518
WERAM-Fec-0156 ENSFCAP00000015379.2 Felis catus 61 5e-147 518
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 59 5e-147 518
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 60 9e-147 517
WERAM-Kop-0004 CAY67954 Komagataella pastoris 54 1e-146 517
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 58 2e-146 516
WERAM-Cag-0003 CAG57932 Candida glabrata 58 3e-146 515
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 59 1e-145 513
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 55 2e-145 513
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 54 3e-145 512
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 62 5e-145 511
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 62 3e-144 508
WERAM-Caa-0018 KGT69072 Candida albicans 57 1e-143 506
WERAM-Cym-0014 CMJ129CT Cyanidioschyzon merolae 59 3e-143 505
WERAM-Asg-0034 AAS54885 Ashbya gossypii 56 4e-143 505
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 57 5e-143 504
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 55 9e-143 504
WERAM-Ved-0020 EGY15146 Verticillium dahliae 56 7e-142 501
WERAM-Trv-0003 EHK19072 Trichoderma virens 58 2e-141 499
WERAM-Trr-0017 EGR48353 Trichoderma reesei 54 5e-141 498
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 66 1e-140 497
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 59 2e-140 496
WERAM-Nec-0007 EFNCRP00000000997 Neurospora crassa 60 3e-140 496
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 62 3e-140 495
Created Date 25-Jun-2016