WERAM Information

Tag Content
WERAM ID WERAM-Zem-0054
Ensembl Protein ID GRMZM2G080917_P01
Gene Name Zm.16858 ALF13
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM2G080917 GRMZM2G080917_T01 GRMZM2G080917_P01
GRMZM2G080917 GRMZM2G080917_T02 GRMZM2G080917_P02
GRMZM2G080917 GRMZM2G080917_T03 GRMZM2G080917_P03
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.70e-12 48.3 202 252
Organism Zea mays
Domain Profile
  Me_Reader PHD
            PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                        t+C +Cg++d +++++++Cd+C++w+H+kCvk++  +++  k++ Cp C++
  GRMZM2G080917_P01 202 TLCGTCGTNDGKDQFWICCDNCEKWYHGKCVKITPARAEHIKQYKCPDCTN 252
                        78****999999999*******************666664479******97 PP
Protein Sequence
(Fasta)		MDGGGSGPAP NAAHTAEEVF RDYKARRAGM IKALTTDVER FFKLCDPEKE NLCLYGYPDE 60
TWEVTLPAEE VPPEIPEPAL GINFARDGMN EKDWLALVAV HSDSWLLSVA FYFGARFGFD 120
REARRRLFSL INNMPTIFEV VTGAVKKQQA KEKTPNSSSK SNKPSSKVQS RAESRSKAKV 180
PKDEEESGDD DGDEEAEEHD NTLCGTCGTN DGKDQFWICC DNCEKWYHGK CVKITPARAE 240
HIKQYKCPDC TNKRVRA 257
Nucleotide Sequence
(Fasta)		CCAGCCTCCA GTCCACAATG GACCGGGTGT ACTGGATGTA ATGGACACAG AACGACGAGG 60
ACGGCGGCGG CGGCGGTTGG ACACTGTACC GAGCACCCGC ACAGTTCTCA AATAGACCGG 120
GCCCAAATCC TTTCCGAAAC GCCCATGAAA TTCGCCGCGA GCAAAATATA AACCCACTCC 180
TGCCCTTCCT CCAACTCCTC CGTTCCCCGT TCCCTCCTCT ACCACTGGCC CCGGCACCGC 240
GGGAGCGCCG ACCGCCTGCT CGTCTCGCCG CAGCCCGTCC CTGTCGGAAC CCTAGCGGCC 300
GCCATTGCCC ACGCGCTGCG CGCCCGATGG ACGGCGGGGG CTCCGGGCCG GCGCCCAACG 360
CCGCGCACAC CGCGGAAGAG GTCTTCCGCG ACTACAAAGC CCGCCGCGCC GGCATGATCA 420
AGGCACTCAC CACCGATGTG GAGAGGTTCT TCAAGCTCTG TGACCCCGAA AAGGAGAACT 480
TGTGCCTCTA TGGCTATCCC GATGAGACAT GGGAGGTTAC CTTGCCAGCT GAGGAAGTGC 540
CCCCAGAGAT CCCTGAACCA GCATTAGGAA TCAACTTTGC TAGGGATGGC ATGAATGAGA 600
AGGACTGGCT GGCGCTAGTT GCAGTCCACA GTGATTCCTG GTTACTATCT GTCGCATTCT 660
ACTTTGGTGC ACGGTTTGGA TTTGACAGAG AAGCTAGGAG GCGGCTCTTT AGCCTGATAA 720
ACAACATGCC CACGATATTT GAGGTGGTGA CGGGAGCAGT CAAGAAGCAG CAGGCAAAGG 780
AGAAGACACC TAACAGTAGC AGCAAGAGCA ACAAGCCTAG TTCAAAAGTG CAGTCAAGAG 840
CAGAGTCTCG ATCGAAGGCT AAGGTCCCCA AAGACGAAGA AGAGAGCGGT GACGACGACG 900
GGGACGAGGA GGCGGAGGAG CACGACAACA CCCTGTGTGG AACCTGCGGG ACCAACGACG 960
GCAAGGACCA GTTCTGGATC TGCTGCGATA ACTGTGAGAA GTGGTACCAT GGGAAGTGTG 1020
TCAAGATCAC GCCCGCACGG GCCGAGCATA TCAAGCAGTA CAAGTGCCCA GACTGCACCA 1080
ACAAGAGGGT CAGGGCGTGA GCAACCGATG CGACCTTGCT AGGAAGGAAA GGAAGAAACG 1140
ACCTCCTTGG CGCCAAGATA TGGCGTGTAG TTCCCTAGTC TGTAAGCCTG CATTTTTCAT 1200
TTATGGTTGT TTTATCTGTT GATTAGCTGT TCGACCTAGC ATTGTCTAAT GCGTGGCATG 1260
TCTCATGTGC TGAGTGTTGA CATTGCCATG GGCCCCGCCC TCTAGTCTGT AAACGTTGTC 1320
ACTGAAGGTA CCTCTCGGCT GACCATTTCT CCATTGTTGG TGTTGTGCAA TGAGTAGTGA 1380
ACGTAGTAGT CTTAGCATCT G 1402
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0057 Sb03g042180.1 Sorghum bicolor 98 1e-116 416
WERAM-Sei-0012 Si002638m Setaria italica 95 1e-112 403
WERAM-Ori-0001 BGIOSGA000361-PA Oryza indica 89 1e-103 373
WERAM-Ors-0008 OS01T0887700-01 Oryza sativa 89 1e-103 373
WERAM-Orr-0011 ORUFI01G43190.1 Oryza rufipogon 89 1e-103 373
WERAM-Orp-0013 OPUNC01G38560.1 Oryza punctata 89 1e-103 373
WERAM-Orni-0011 ONIVA01G44710.1 Oryza nivara 89 1e-103 373
WERAM-Orm-0013 OMERI01G36760.1 Oryza meridionalis 89 1e-103 373
WERAM-Orgl-0011 OGLUM01G44060.1 Oryza glumaepatula 89 1e-103 373
WERAM-Org-0012 ORGLA01G0337500.1 Oryza glaberrima 89 1e-103 373
WERAM-Orb-0011 OBART01G39820.1 Oryza barthii 89 1e-103 373
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 80 2e-98 355
WERAM-Lep-0053 LPERR05G13340.1 Leersia perrieri 77 2e-95 345
WERAM-Aet-0093 EMT29143 Aegilops tauschii 86 5e-95 344
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 76 6e-95 343
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 91 1e-94 342
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 85 2e-94 342
WERAM-Orbr-0016 OB01G48580.1 Oryza brachyantha 88 2e-92 335
WERAM-Mua-0134 GSMUA_Achr8P32300_001 Musa acuminata 72 3e-90 328
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 68 2e-83 306
WERAM-Thc-0077 EOY27191 Theobroma cacao 68 7e-83 304
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 67 3e-82 302
WERAM-Amt-0088 ERM99796 Amborella trichopoda 65 1e-81 300
WERAM-Glm-0075 GLYMA07G04040.1 Glycine max 66 1e-81 300
WERAM-Prp-0082 EMJ27202 Prunus persica 67 2e-81 298
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 65 1e-80 296
WERAM-Sol-0079 Solyc06g062850.2.1 Solanum lycopersicum 65 2e-79 293
WERAM-Met-0044 KEH37528 Medicago truncatula 66 1e-78 290
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 63 1e-78 290
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 61 3e-78 288
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 62 2e-77 286
WERAM-Bro-0027 Bo2g021880.1 Brassica oleracea 60 2e-76 282
WERAM-Php-0091 PP1S38_137V6.1 Physcomitrella patens 61 1e-72 269
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 61 2e-69 259
Created Date 25-Jun-2016