| Tag |
Content |
| WERAM ID |
WERAM-Amt-0048 |
| Ensembl Protein ID |
ERN13133 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.20e-161 |
537.1 |
6 |
317 |
|
| Organism |
Amborella trichopoda |
| Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglf 99
kva++yd dvg++++g +hpmkp+rl++t +Lvl+y+l+kk+ei++p+ka +el++fhs +y+efl++++p++++ ++kel ++n+gedcPvf++lf
ERN13133 6 KVAFFYDGDVGNVYFGPNHPMKPHRLCMTYQLVLSYELQKKMEIYRPHKAYPQELAQFHSADYVEFLHRITPDTQHLYAKELVRYNLGEDCPVFENLF 103
799*********************************************************************************************** PP
class-1.txt 100 eycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeef 197
e+cq+++G++l+aa+kLn+k++diainwaGGlhhakk+easGfcy+nD+vl+ilellk+h rvlyidid+hhGDgveeafy+tdrvmtvsfhkyg+ f
ERN13133 104 EFCQIYAGGTLDAARKLNSKQCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKHHTRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDMF 201
************************************************************************************************** PP
class-1.txt 198 fPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvlGGGG 295
fPgtGd++ +g+ +gkyya+nvPlkdgidD s++++fk++i kv+e+++P a+vlqcGaDslagDrlg+fnlsi+gh+ecv+fvk+fnlpllv GGGG
ERN13133 202 FPGTGDVKAIGEREGKYYAINVPLKDGIDDASFTRLFKTIIAKVLETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHSECVRFVKKFNLPLLVTGGGG 299
************************************************************************************************** PP
class-1.txt 296 YtlrnvaRcwtyetavvl 313
Yt++nvaRcwt+et+v+l
ERN13133 300 YTKENVARCWTVETGVLL 317
****************97 PP
|
Protein Sequence
(Fasta) | MPSKDKVAFF YDGDVGNVYF GPNHPMKPHR LCMTYQLVLS YELQKKMEIY RPHKAYPQEL 60
AQFHSADYVE FLHRITPDTQ HLYAKELVRY NLGEDCPVFE NLFEFCQIYA GGTLDAARKL 120
NSKQCDIAIN WAGGLHHAKK CEASGFCYIN DLVLGILELL KHHTRVLYID IDVHHGDGVE 180
EAFYFTDRVM TVSFHKYGDM FFPGTGDVKA IGEREGKYYA INVPLKDGID DASFTRLFKT 240
IIAKVLETYQ PGAIVLQCGA DSLAGDRLGC FNLSIDGHSE CVRFVKKFNL PLLVTGGGGY 300
TKENVARCWT VETGVLLDTE LPNEIPDNDY IKYFGPDYSL KIQNGNVQEN LNSKSYLSSI 360
KVQVMESLRC IQHAPGVQMQ EVPRDFYIPD SDEDEQNPDE RVDQHTEDKQ IQREDEYYDG 420
DNDNDHTMED AL 432Protein Fasta Sequence
>ERN13133|Class-I|Amborella trichopoda
MPSKDKVAFFYDGDVGNVYFGPNHPMKPHRLCMTYQLVLSYELQKKMEIYRPHKAYPQELAQFHSADYVEFLHRITPDTQHLYAKELVRYNLGEDCPVFENLFEFCQIYAGGTLDAARKLNSKQCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKHHTRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDMFFPGTGDVKAIGEREGKYYAINVPLKDGIDDASFTRLFKTIIAKVLETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHSECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDTELPNEIPDNDYIKYFGPDYSLKIQNGNVQENLNSKSYLSSIKVQVMESLRCIQHAPGVQMQEVPRDFYIPDSDEDEQNPDERVDQHTEDKQIQREDEYYDGDNDNDHTMEDAL |
Nucleotide Sequence
(Fasta) | ATGCCGTCGA AGGACAAAGT CGCTTTTTTC TATGACGGAG ATGTTGGGAA TGTTTATTTT 60
GGTCCAAATC ATCCTATGAA GCCACACCGA CTTTGCATGA CATACCAACT TGTTCTCTCT 120
TATGAGCTGC AAAAGAAGAT GGAGATATAT CGACCACACA AGGCATATCC TCAGGAGCTT 180
GCTCAGTTTC ACTCGGCTGA TTATGTGGAG TTCTTGCACC GAATAACACC TGATACCCAA 240
CATCTGTATG CAAAAGAGCT AGTGAGATAT AATCTTGGTG AGGACTGCCC TGTGTTTGAG 300
AACTTGTTTG AGTTCTGTCA GATATATGCT GGTGGCACTT TAGATGCTGC ACGCAAGTTG 360
AATAGTAAAC AATGTGATAT AGCTATAAAT TGGGCGGGTG GGCTACATCA TGCCAAAAAG 420
TGTGAGGCGT CAGGTTTTTG TTATATCAAT GATCTGGTTT TGGGTATTTT GGAGCTTCTC 480
AAACATCATA CTCGAGTGTT GTATATTGAC ATCGATGTCC ATCATGGGGA TGGGGTTGAA 540
GAAGCCTTTT ATTTTACAGA TAGGGTTATG ACTGTGAGTT TTCACAAGTA TGGGGATATG 600
TTTTTTCCTG GAACAGGGGA TGTTAAGGCT ATAGGAGAAA GAGAAGGAAA GTACTATGCC 660
ATAAATGTCC CTCTCAAGGA TGGAATAGAT GATGCCAGTT TTACTCGTCT TTTTAAAACG 720
ATTATAGCCA AGGTTCTTGA AACATATCAA CCTGGTGCTA TAGTTCTCCA ATGTGGAGCT 780
GATTCTCTTG CTGGGGATCG CCTAGGCTGC TTCAACCTTT CCATTGATGG GCACTCTGAA 840
TGTGTAAGAT TTGTGAAGAA ATTCAATTTG CCGCTGTTGG TTACTGGAGG TGGAGGCTAC 900
ACAAAAGAGA ATGTGGCTCG TTGTTGGACT GTTGAAACAG GGGTTCTTCT GGATACAGAG 960
CTTCCAAATG AAATTCCGGA TAATGACTAT ATAAAATATT TCGGCCCAGA TTATTCCTTG 1020
AAGATTCAAA ATGGAAATGT GCAGGAAAAC TTAAATAGCA AATCCTATCT AAGTTCAATC 1080
AAGGTGCAAG TCATGGAAAG CTTACGGTGC ATCCAGCATG CCCCTGGAGT ACAGATGCAA 1140
GAAGTGCCTC GTGACTTTTA CATCCCAGAT TCTGATGAAG ATGAGCAGAA TCCAGATGAA 1200
CGCGTTGACC AGCATACTGA AGACAAGCAA ATTCAACGGG AGGACGAGTA TTATGATGGT 1260
GATAATGATA ATGATCACAC CATGGAGGAT GCCTTGTAA
Nucleotide Fasta Sequence
>ERN13133|Class-I|Amborella trichopoda
ATGCCGTCGAAGGACAAAGTCGCTTTTTTCTATGACGGAGATGTTGGGAATGTTTATTTTGGTCCAAATCATCCTATGAAGCCACACCGACTTTGCATGACATACCAACTTGTTCTCTCTTATGAGCTGCAAAAGAAGATGGAGATATATCGACCACACAAGGCATATCCTCAGGAGCTTGCTCAGTTTCACTCGGCTGATTATGTGGAGTTCTTGCACCGAATAACACCTGATACCCAACATCTGTATGCAAAAGAGCTAGTGAGATATAATCTTGGTGAGGACTGCCCTGTGTTTGAGAACTTGTTTGAGTTCTGTCAGATATATGCTGGTGGCACTTTAGATGCTGCACGCAAGTTGAATAGTAAACAATGTGATATAGCTATAAATTGGGCGGGTGGGCTACATCATGCCAAAAAGTGTGAGGCGTCAGGTTTTTGTTATATCAATGATCTGGTTTTGGGTATTTTGGAGCTTCTCAAACATCATACTCGAGTGTTGTATATTGACATCGATGTCCATCATGGGGATGGGGTTGAAGAAGCCTTTTATTTTACAGATAGGGTTATGACTGTGAGTTTTCACAAGTATGGGGATATGTTTTTTCCTGGAACAGGGGATGTTAAGGCTATAGGAGAAAGAGAAGGAAAGTACTATGCCATAAATGTCCCTCTCAAGGATGGAATAGATGATGCCAGTTTTACTCGTCTTTTTAAAACGATTATAGCCAAGGTTCTTGAAACATATCAACCTGGTGCTATAGTTCTCCAATGTGGAGCTGATTCTCTTGCTGGGGATCGCCTAGGCTGCTTCAACCTTTCCATTGATGGGCACTCTGAATGTGTAAGATTTGTGAAGAAATTCAATTTGCCGCTGTTGGTTACTGGAGGTGGAGGCTACACAAAAGAGAATGTGGCTCGTTGTTGGACTGTTGAAACAGGGGTTCTTCTGGATACAGAGCTTCCAAATGAAATTCCGGATAATGACTATATAAAATATTTCGGCCCAGATTATTCCTTGAAGATTCAAAATGGAAATGTGCAGGAAAACTTAAATAGCAAATCCTATCTAAGTTCAATCAAGGTGCAAGTCATGGAAAGCTTACGGTGCATCCAGCATGCCCCTGGAGTACAGATGCAAGAAGTGCCTCGTGACTTTTACATCCCAGATTCTGATGAAGATGAGCAGAATCCAGATGAACGCGTTGACCAGCATACTGAAGACAAGCAAATTCAACGGGAGGACGAGTATTATGATGGTGATAATGATAATGATCACACCATGGAGGATGCCTTGTAA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
