Tag |
Content |
WERAM ID |
WERAM-Orla-0211 |
Ensembl Protein ID |
ENSORLP00000025157.1 |
Gene Name |
hdac6 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
1.60e-98 |
330.2 |
2 |
224 |
HDAC |
Class-I |
4.80e-29 |
102.2 |
17 |
206 |
|
Organism |
Oryzias latipes |
Domain Profile |
HDAC Class-II
class-2.txt 117 lkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpes 205 l+g+++n++a+vRPPGHHae + ++GFClfn a++a+++q+ + +ili+DwDvHhGnGtq+if++d++vly+SlHRyd+g ffp+s ENSORLP00000025157.1 2 LNGQVNNAVAIVRPPGHHAEMDFPCGFCLFNTTALTARHAQKVSHDLQILILDWDVHHGNGTQHIFEDDNSVLYISLHRYDNGAFFPSS 90 6899*****************************************9******************************************* PP class-2.txt 206 gsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatltkqllklagg 294 ++ga+++vg +kg g+nvN+aw+gg mgd++ylaaf++vv+pia+eF+P+lvlvsaGfDaa+gdplgg++vt+++ya++t++l++lagg ENSORLP00000025157.1 91 KDGAPENVGVAKGAGYNVNLAWSGGRMGDSDYLAAFHQVVMPIATEFNPGLVLVSAGFDAAQGDPLGGYHVTPEGYAHFTHMLMSLAGG 179 ***************************************************************************************** PP class-2.txt 295 rvvlvlEGGynlkaiaeaveavvkaLlg 322 rv+++lEGGynlk+i+++++a++++Llg ENSORLP00000025157.1 180 RVLFILEGGYNLKSISDSMAACTSVLLG 207 **************************96 PP class-2.txt 130 PPGHHae 136 PP HH+ ENSORLP00000025157.1 218 PPPHHCA 224 999**97 PP
HDAC Class-I
class-1.txt 130 GlhhakkseasGfcyvnDivlailellk.khk.rvlyididlhhGDgveeafyttdrvmtvsfhkygee.ffPgt..Gdlsdvgaekgk 213 G hha + Gfc n l+ + +k +h+ ++l +d d+hhG+g ++ f+ + v+ +s+h+y+++ ffP++ G ++vg+ kg ENSORLP00000025157.1 17 G-HHAEMDFPCGFCLFNTTALTARHAQKvSHDlQILILDWDVHHGNGTQHIFEDDNSVLYISLHRYDNGaFFPSSkdGAPENVGVAKGA 104 4.9**********************999755558********************************9854***97447789******** PP class-1.txt 214 yyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.nlpllvlGGGGYtlrn 300 y vn+ + g + D+ y + f++v+ ++ f+P v++ G D+ +gD+lg ++++ +g+a+ +++ s +l + GGY+l+ ENSORLP00000025157.1 105 GYNVNLAWSGGrMGDSDYLAAFHQVVMPIATEFNPGLVLVSAGFDAAQGDPLGGYHVTPEGYAHFTHMLMSLaGGRVLFILEGGYNLKS 193 ********998689******************************************************999976788888899****** PP class-1.txt 301 vaRcwtyetavvl 313 ++ + t+v+l ENSORLP00000025157.1 194 ISDSMAACTSVLL 206 **99999999876 PP
|
Protein Sequence (Fasta) | MLNGQVNNAV AIVRPPGHHA EMDFPCGFCL FNTTALTARH AQKVSHDLQI LILDWDVHHG 60 NGTQHIFEDD NSVLYISLHR YDNGAFFPSS KDGAPENVGV AKGAGYNVNL AWSGGRMGDS 120 DYLAAFHQVV MPIATEFNPG LVLVSAGFDA AQGDPLGGYH VTPEGYAHFT HMLMSLAGGR 180 VLFILEGGYN LKSISDSMAA CTSVLLGDPP PSLATPLPPP HHCAAVAINK VIQHHAPYWK 240 Protein Fasta Sequence
>ENSORLP00000025157.1|Class-I|Oryzias latipes MLNGQVNNAVAIVRPPGHHAEMDFPCGFCLFNTTALTARHAQKVSHDLQILILDWDVHHGNGTQHIFEDDNSVLYISLHRYDNGAFFPSSKDGAPENVGVAKGAGYNVNLAWSGGRMGDSDYLAAFHQVVMPIATEFNPGLVLVSAGFDAAQGDPLGGYHVTPEGYAHFTHMLMSLAGGRVLFILEGGYNLKSISDSMAACTSVLLGDPPPSLATPLPPPHHCAAVAINKVIQHHAPYWK
|
Nucleotide Sequence (Fasta) | CAGTCCGCCC AGCTAGCTGC TGGAAGCTGC TTTGCTGCTG TGGAGCATAT GTTAAACGGA 60 CAGGTAAATA ATGCCGTGGC CATCGTCCGT CCTCCAGGCC ATCACGCTGA GATGGACTTT 120 CCCTGCGGCT TTTGCCTCTT CAACACAACA GCACTCACTG CTCGCCATGC ACAGAAAGTC 180 TCCCATGATC TACAAATCTT GATTCTGGAC TGGGATGTTC ATCACGGGAA CGGGACGCAG 240 CACATATTTG AGGACGATAA CAGTGTTCTT TATATCTCCC TCCACCGCTA TGACAATGGG 300 GCTTTCTTTC CGTCATCAAA AGACGGTGCC CCTGAAAATG TGGGTGTGGC CAAAGGTGCC 360 GGGTATAATG TAAATTTGGC GTGGAGTGGA GGGCGAATGG GGGACTCTGA CTACCTGGCA 420 GCGTTTCACC AAGTTGTCAT GCCAATCGCA ACAGAGTTTA ACCCCGGCCT GGTTCTGGTG 480 TCCGCCGGGT TTGATGCAGC TCAGGGGGAT CCACTTGGTG GATATCACGT GACTCCAGAA 540 GGATACGCTC ACTTCACGCA CATGCTGATG TCACTTGCTG GAGGGCGGGT CCTATTCATC 600 CTGGAGGGAG GCTACAACCT CAAATCCATT TCTGACTCCA TGGCTGCCTG CACCAGTGTG 660 CTGCTGGGAG ACCCTCCCCC ATCACTGGCG ACCCCCCTCC CCCCCCCTCA CCACTGCGCT 720 GCAGTAGCCA TCAACAAGGT CATCCAGCAC CATGCCCCCT ACTGGAAGA
Nucleotide Fasta Sequence
>ENSORLP00000025157.1|Class-I|Oryzias latipes CAGTCCGCCCAGCTAGCTGCTGGAAGCTGCTTTGCTGCTGTGGAGCATATGTTAAACGGACAGGTAAATAATGCCGTGGCCATCGTCCGTCCTCCAGGCCATCACGCTGAGATGGACTTTCCCTGCGGCTTTTGCCTCTTCAACACAACAGCACTCACTGCTCGCCATGCACAGAAAGTCTCCCATGATCTACAAATCTTGATTCTGGACTGGGATGTTCATCACGGGAACGGGACGCAGCACATATTTGAGGACGATAACAGTGTTCTTTATATCTCCCTCCACCGCTATGACAATGGGGCTTTCTTTCCGTCATCAAAAGACGGTGCCCCTGAAAATGTGGGTGTGGCCAAAGGTGCCGGGTATAATGTAAATTTGGCGTGGAGTGGAGGGCGAATGGGGGACTCTGACTACCTGGCAGCGTTTCACCAAGTTGTCATGCCAATCGCAACAGAGTTTAACCCCGGCCTGGTTCTGGTGTCCGCCGGGTTTGATGCAGCTCAGGGGGATCCACTTGGTGGATATCACGTGACTCCAGAAGGATACGCTCACTTCACGCACATGCTGATGTCACTTGCTGGAGGGCGGGTCCTATTCATCCTGGAGGGAGGCTACAACCTCAAATCCATTTCTGACTCCATGGCTGCCTGCACCAGTGTGCTGCTGGGAGACCCTCCCCCATCACTGGCGACCCCCCTCCCCCCCCCTCACCACTGCGCTGCAGTAGCCATCAACAAGGTCATCCAGCACCATGCCCCCTACTGGAAGA
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |