Tag |
Content |
WERAM ID |
WERAM-Orn-0142 |
Ensembl Protein ID |
ENSONIP00000014918.1 |
Gene Name |
hdac8 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
1.70e-134 |
448.7 |
17 |
324 |
|
Organism |
Oreochromis niloticus |
Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90 +vay+y+++ +++++++ +++p+r+s++h+L+ +ygl ++++ivkp+ a+ ee++kfh++ y+e+l+k++++ +++ + +++ +++g+ ENSONIP00000014918.1 17 RVAYVYSPE--YIQTCDTLSKVPNRASMVHSLIEAYGLLQHMSIVKPHVATIEEMAKFHTDSYLEHLHKISQDGDNDDP-QSADYGLGY 102 799***999..7889**********************************************************999988.899****** PP class-1.txt 91 dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeaf 179 dcPv++g+f+y++ ++Ga+l+aa++L ++++d+ainwaGG+hhakk+easGfcyvnD vl+il+l+ k++rvly+d+dlhhGDgve+af ENSONIP00000014918.1 103 DCPVVEGIFDYAAGVGGATLTAAQTLLDQKCDVAINWAGGWHHAKKDEASGFCYVNDAVLGILRLREKYERVLYVDVDLHHGDGVEDAF 191 ***************************************************************************************** PP class-1.txt 180 yttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefn 268 ++t++vmtvs+hk++++ffPgtGdl d+g +kg++yavnvPl+dgi+D++y+++f+sv+++v f+Pea+v+q+GaD++agD++++fn ENSONIP00000014918.1 192 SFTSKVMTVSLHKFSPGFFPGTGDLCDTGLGKGRWYAVNVPLEDGIKDDRYYQVFTSVLQEVRAQFNPEAIVMQLGADTMAGDPMCSFN 280 ***************************************************************************************** PP class-1.txt 269 lsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavv 312 ++ g ++c+++v +++lp+l+lGGGGY+l+n+aRcwty+ta v ENSONIP00000014918.1 281 MTPVGVGKCLQYVLQWQLPTLLLGGGGYNLANTARCWTYLTAEV 324 *****************************************865 PP
|
Protein Sequence (Fasta) | MSFRGDSDDD DSCCKRRVAY VYSPEYIQTC DTLSKVPNRA SMVHSLIEAY GLLQHMSIVK 60 PHVATIEEMA KFHTDSYLEH LHKISQDGDN DDPQSADYGL GYDCPVVEGI FDYAAGVGGA 120 TLTAAQTLLD QKCDVAINWA GGWHHAKKDE ASGFCYVNDA VLGILRLREK YERVLYVDVD 180 LHHGDGVEDA FSFTSKVMTV SLHKFSPGFF PGTGDLCDTG LGKGRWYAVN VPLEDGIKDD 240 RYYQVFTSVL QEVRAQFNPE AIVMQLGADT MAGDPMCSFN MTPVGVGKCL QYVLQWQLPT 300 LLLGGGGYNL ANTARCWTYL TAEVLGKTLS SEIPDHEFFT EYGPDYSLEI SPSCRPDRND 360 TKHLDQVIST IKGNLKNVV 379Protein Fasta Sequence
>ENSONIP00000014918.1|Class-I|Oreochromis niloticus MSFRGDSDDDDSCCKRRVAYVYSPEYIQTCDTLSKVPNRASMVHSLIEAYGLLQHMSIVKPHVATIEEMAKFHTDSYLEHLHKISQDGDNDDPQSADYGLGYDCPVVEGIFDYAAGVGGATLTAAQTLLDQKCDVAINWAGGWHHAKKDEASGFCYVNDAVLGILRLREKYERVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDLCDTGLGKGRWYAVNVPLEDGIKDDRYYQVFTSVLQEVRAQFNPEAIVMQLGADTMAGDPMCSFNMTPVGVGKCLQYVLQWQLPTLLLGGGGYNLANTARCWTYLTAEVLGKTLSSEIPDHEFFTEYGPDYSLEISPSCRPDRNDTKHLDQVISTIKGNLKNVV
|
Nucleotide Sequence (Fasta) | CCAACCTAAA TGAGTTTCAG AGGTGACAGC GATGATGACG ACAGCTGCTG TAAACGAAGA 60 GTCGCGTATG TTTACAGCCC GGAGTACATC CAGACCTGCG ACACTTTATC CAAAGTGCCA 120 AACCGGGCGA GTATGGTCCA CTCACTGATA GAAGCCTATG GACTGCTTCA ACACATGAGC 180 ATTGTCAAAC CCCACGTGGC CACTATAGAG GAAATGGCCA AATTCCACAC TGATTCCTAC 240 CTGGAGCATC TCCACAAGAT CAGCCAGGAC GGAGACAACG ATGACCCCCA GTCCGCTGAC 300 TACGGCCTGG GCTATGACTG TCCAGTGGTC GAGGGCATAT TTGACTACGC AGCAGGAGTA 360 GGGGGCGCTA CGCTGACGGC AGCTCAGACT CTGTTGGACC AAAAGTGTGA CGTGGCCATC 420 AACTGGGCAG GAGGGTGGCA CCACGCCAAG AAGGATGAGG CTTCAGGCTT CTGTTACGTG 480 AACGATGCTG TGCTGGGAAT CCTCAGACTG AGAGAGAAAT ATGAAAGAGT CCTGTATGTG 540 GACGTTGACC TGCATCATGG AGACGGTGTT GAAGATGCCT TCAGCTTCAC ATCCAAAGTT 600 ATGACCGTTT CACTGCACAA GTTCTCGCCC GGGTTCTTCC CAGGTACGGG TGACCTGTGT 660 GACACCGGGC TGGGTAAAGG CCGCTGGTAC GCTGTGAACG TCCCGCTGGA GGACGGCATC 720 AAGGACGACA GATACTACCA GGTTTTTACC AGCGTCCTGC AGGAGGTGCG GGCACAGTTC 780 AACCCGGAGG CGATAGTGAT GCAGCTGGGT GCCGACACAA TGGCGGGCGA CCCTATGTGC 840 TCCTTCAACA TGACCCCTGT TGGGGTGGGC AAGTGTCTGC AGTATGTCCT GCAGTGGCAG 900 CTACCTACAC TACTGCTGGG CGGAGGAGGT TATAACCTGG CTAACACAGC TCGGTGTTGG 960 ACCTACCTGA CAGCAGAAGT ACTGGGAAAG ACTCTCTCCT CTGAAATACC TGACCATGAG 1020 TTTTTTACAG AATACGGACC AGACTACTCG CTGGAGATCA GTCCGAGCTG TAGACCAGAC 1080 CGCAACGACA CCAAACACCT GGACCAGGTC ATCAGCACCA TCAAAGGGAA TTTAAAGAAT 1140 GTGGTTTAGG ACTCAGNNNN NNNNNNNNNN NNNNNNAGAT AAAAATATCC CTTTGAAGAT 1200 AAACTAATAA AACACACACA CACACACACA CACACACACA CACACACACA CACACACACA 1260 CACACACACA GGAGAACACA CACCCCATGT TTCCAAACCA GGTCGACACT CTGCGACTTT 1320 AATGAAGACA ATATGGAGCG GACCCCTTCG GCCCCGAGGC ACGGAGCAAA CGAGGGAGGG 1380 GGAAAGAGAA GGAGTTTTGG AAAACATTAG CTGAGTGTTT CCAGGGGAAA ACAGTTTTAA 1440 TAAGGGATGG GGATGGGGAG GGGTGGATGT GGTTGGTGTA CCAGTGTTCG CTGTTTTTAA 1500 TTCTTTGTTT TTTGGAAACG GTTCACGTGT TTGCGTGAAT GAGAGAGTTT ATGGTATGTT 1560 CAGTGCGGTT ATGTAAAGCT GGGTTACAGC TGAGCGTTTT GGTATCCAGA GGAGGGGGGG 1620 AGTGCATCGG TCAGACGTAT TAAACCAAAT GGAAAAAGCA GATTTTTCAG GAGTACGGTT 1680 TCACGGTCAC CCCGCTCCTG CTGTGATTTC AACCCCTCGA GGACCGATAA GCGTTAAAGC 1740 AGACGAGTGG CCGTGTTTCC CCAAAAGCAC CGTTAAACCT CGTTCTCGGT CTGAGAGGCC 1800 TGAAAAGTAT GTGAGATGTC TGGCGAGGAA GAAAAAAAAA GCTGGAAAAT AGCCGGTTGC 1860 ACATTGTAGC CACATTGTTT GGAGCCCTGG GCAAAGTCAA ACATCTGGAT GACGTTTGGA 1920 ATTTTACATG GAAAATATGC AGAGAAAGTT AAAAAGGGTT AGTCTTTGGA CAGGCAACAA 1980 CAAAGATTAC ATGACCCTTA AGGAGAATTT AGATAGACAC AGCAAACCCT CAACTGGTTT 2040 GGTCTACTCA GAAACTGGCT TCCACAGTAG GACTGAAGAG GAAACTATTG AATGATCCTT 2100 TGTAGTTATG CTGGTACCAA CTGAAATGCA TCCCAGACTA ACAAAGGTTT GGAGTGAGTG 2160 TCCAGTCAAG TTTGTTGTTG TCTTTTTGTT GATCAAATGT TGATTTAAAT TCAAGCATCG 2220 CCTGTTTTAA ACTGTTTTTA TTGTTGCTGT CTTTTTCACA TTAAACATTT TAAAGAATTG 2280 G
2282Nucleotide Fasta Sequence
>ENSONIP00000014918.1|Class-I|Oreochromis niloticus CCAACCTAAATGAGTTTCAGAGGTGACAGCGATGATGACGACAGCTGCTGTAAACGAAGAGTCGCGTATGTTTACAGCCCGGAGTACATCCAGACCTGCGACACTTTATCCAAAGTGCCAAACCGGGCGAGTATGGTCCACTCACTGATAGAAGCCTATGGACTGCTTCAACACATGAGCATTGTCAAACCCCACGTGGCCACTATAGAGGAAATGGCCAAATTCCACACTGATTCCTACCTGGAGCATCTCCACAAGATCAGCCAGGACGGAGACAACGATGACCCCCAGTCCGCTGACTACGGCCTGGGCTATGACTGTCCAGTGGTCGAGGGCATATTTGACTACGCAGCAGGAGTAGGGGGCGCTACGCTGACGGCAGCTCAGACTCTGTTGGACCAAAAGTGTGACGTGGCCATCAACTGGGCAGGAGGGTGGCACCACGCCAAGAAGGATGAGGCTTCAGGCTTCTGTTACGTGAACGATGCTGTGCTGGGAATCCTCAGACTGAGAGAGAAATATGAAAGAGTCCTGTATGTGGACGTTGACCTGCATCATGGAGACGGTGTTGAAGATGCCTTCAGCTTCACATCCAAAGTTATGACCGTTTCACTGCACAAGTTCTCGCCCGGGTTCTTCCCAGGTACGGGTGACCTGTGTGACACCGGGCTGGGTAAAGGCCGCTGGTACGCTGTGAACGTCCCGCTGGAGGACGGCATCAAGGACGACAGATACTACCAGGTTTTTACCAGCGTCCTGCAGGAGGTGCGGGCACAGTTCAACCCGGAGGCGATAGTGATGCAGCTGGGTGCCGACACAATGGCGGGCGACCCTATGTGCTCCTTCAACATGACCCCTGTTGGGGTGGGCAAGTGTCTGCAGTATGTCCTGCAGTGGCAGCTACCTACACTACTGCTGGGCGGAGGAGGTTATAACCTGGCTAACACAGCTCGGTGTTGGACCTACCTGACAGCAGAAGTACTGGGAAAGACTCTCTCCTCTGAAATACCTGACCATGAGTTTTTTACAGAATACGGACCAGACTACTCGCTGGAGATCAGTCCGAGCTGTAGACCAGACCGCAACGACACCAAACACCTGGACCAGGTCATCAGCACCATCAAAGGGAATTTAAAGAATGTGGTTTAGGACTCAGNNNNNNNNNNNNNNNNNNNNAGATAAAAATATCCCTTTGAAGATAAACTAATAAAACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAGGAGAACACACACCCCATGTTTCCAAACCAGGTCGACACTCTGCGACTTTAATGAAGACAATATGGAGCGGACCCCTTCGGCCCCGAGGCACGGAGCAAACGAGGGAGGGGGAAAGAGAAGGAGTTTTGGAAAACATTAGCTGAGTGTTTCCAGGGGAAAACAGTTTTAATAAGGGATGGGGATGGGGAGGGGTGGATGTGGTTGGTGTACCAGTGTTCGCTGTTTTTAATTCTTTGTTTTTTGGAAACGGTTCACGTGTTTGCGTGAATGAGAGAGTTTATGGTATGTTCAGTGCGGTTATGTAAAGCTGGGTTACAGCTGAGCGTTTTGGTATCCAGAGGAGGGGGGGAGTGCATCGGTCAGACGTATTAAACCAAATGGAAAAAGCAGATTTTTCAGGAGTACGGTTTCACGGTCACCCCGCTCCTGCTGTGATTTCAACCCCTCGAGGACCGATAAGCGTTAAAGCAGACGAGTGGCCGTGTTTCCCCAAAAGCACCGTTAAACCTCGTTCTCGGTCTGAGAGGCCTGAAAAGTATGTGAGATGTCTGGCGAGGAAGAAAAAAAAAGCTGGAAAATAGCCGGTTGCACATTGTAGCCACATTGTTTGGAGCCCTGGGCAAAGTCAAACATCTGGATGACGTTTGGAATTTTACATGGAAAATATGCAGAGAAAGTTAAAAAGGGTTAGTCTTTGGACAGGCAACAACAAAGATTACATGACCCTTAAGGAGAATTTAGATAGACACAGCAAACCCTCAACTGGTTTGGTCTACTCAGAAACTGGCTTCCACAGTAGGACTGAAGAGGAAACTATTGAATGATCCTTTGTAGTTATGCTGGTACCAACTGAAATGCATCCCAGACTAACAAAGGTTTGGAGTGAGTGTCCAGTCAAGTTTGTTGTTGTCTTTTTGTTGATCAAATGTTGATTTAAATTCAAGCATCGCCTGTTTTAAACTGTTTTTATTGTTGCTGTCTTTTTCACATTAAACATTTTAAAGAATTGG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |