| Tag |
Content |
| WERAM ID |
WERAM-Bro-0059 |
| Ensembl Protein ID |
Bo3g120880.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
3.90e-162 |
540.7 |
55 |
366 |
|
| Organism |
Brassica oleracea |
| Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdgl 98
k++y+yd dvg++++g +hpmkp+rl++th+L+l+ygl+ k+e+++p+ka e+++fhs +y+efl++++pen++ +++e++++n+gedcPvf+++
Bo3g120880.1 55 KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQFHSPDYVEFLQRINPENKDLFPNEMARYNLGEDCPVFEDM 151
689********************************************************************************************** PP
class-1.txt 99 feycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkyge 195
fe+cq+++Ga+++aa++Ln+k +diainwaGGlhhakk++asGfcy+nD+vl+ilellk+h+rvlyidid+hhGDgveeafy+tdrvmtvsfhk+g+
Bo3g120880.1 152 FEFCQIYAGATIDAARRLNNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD 248
************************************************************************************************* PP
class-1.txt 196 effPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllvlG 292
+ffPgtGd++++g+ +gk+ya+nvPl+dgidD+s++++f+ +iskv+e+++P a+vlqcGaDsla+Drlg+fnlsi+ghaecvkfvk+fn+pllv G
Bo3g120880.1 249 KFFPGTGDVKEIGEREGKFYAINVPLRDGIDDSSFNRLFRAIISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNIPLLVTG 345
************************************************************************************************* PP
class-1.txt 293 GGGYtlrnvaRcwtyetavvl 313
GGGYt++nvaRcwt+et+++l
Bo3g120880.1 346 GGGYTKENVARCWTVETGILL 366
*******************97 PP
|
Protein Sequence
(Fasta) | IGPSSLLLSL VALRFSRLHS SPRNRLTSIE AIIVVNRSIS VVVFFFLEEM RSKDKISYFY 60
DGDVGSVYFG PNHPMKPHRL CMTHHLILAY GLHSKMEVYR PHKAYPIEMA QFHSPDYVEF 120
LQRINPENKD LFPNEMARYN LGEDCPVFED MFEFCQIYAG ATIDAARRLN NKLCDIAINW 180
AGGLHHAKKC DASGFCYIND LVLGILELLK HHPRVLYIDI DVHHGDGVEE AFYFTDRVMT 240
VSFHKFGDKF FPGTGDVKEI GEREGKFYAI NVPLRDGIDD SSFNRLFRAI ISKVVEIYQP 300
GAIVLQCGAD SLARDRLGCF NLSIDGHAEC VKFVKKFNIP LLVTGGGGYT KENVARCWTV 360
ETGILLDTEL PNEIPDNDYI KYFGPDYSLK IPGGHIENLN TKSYISTIKA QILDNLRYIQ 420
HAPSVQMQEV PPDFYIPDFD EDERNPDVRV DQRSRDKQIQ RDDEYFDGDK DNDAS 475Protein Fasta Sequence
>Bo3g120880.1|Class-I|Brassica oleracea
IGPSSLLLSLVALRFSRLHSSPRNRLTSIEAIIVVNRSISVVVFFFLEEMRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEMAQFHSPDYVEFLQRINPENKDLFPNEMARYNLGEDCPVFEDMFEFCQIYAGATIDAARRLNNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLRDGIDDSSFNRLFRAIISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNIPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPDNDYIKYFGPDYSLKIPGGHIENLNTKSYISTIKAQILDNLRYIQHAPSVQMQEVPPDFYIPDFDEDERNPDVRVDQRSRDKQIQRDDEYFDGDKDNDAS |
Nucleotide Sequence
(Fasta) | ATTGGACCCT CCTCCCTCCT CCTCTCCCTA GTTGCGCTTC GATTCAGTCG TCTCCACTCT 60
TCTCCGAGGA ATCGTCTCAC ATCTATTGAA GCCATAATTG TTGTTAACAG GTCGATCTCG 120
GTTGTAGTTT TTTTTTTCTT AGAAGAGATG CGGTCCAAGG ACAAAATCTC CTACTTTTAC 180
GATGGAGATG TAGGGAGCGT TTATTTTGGT CCGAATCACC CAATGAAACC TCACAGGCTT 240
TGTATGACCC ATCATCTTAT CCTTGCATAT GGCCTCCATA GCAAGATGGA AGTTTATCGT 300
CCACACAAGG CATACCCTAT CGAGATGGCC CAGTTCCATT CTCCAGACTA TGTCGAGTTC 360
CTGCAACGAA TCAACCCAGA AAATAAGGAT TTGTTTCCCA ACGAAATGGC TAGATATAAT 420
TTAGGAGAGG ATTGTCCTGT CTTTGAGGAT ATGTTCGAGT TTTGTCAAAT TTATGCGGGT 480
GCAACCATAG ATGCTGCACG CAGATTAAAC AACAAACTCT GTGACATTGC GATAAACTGG 540
GCGGGCGGGT TGCACCATGC TAAAAAATGC GATGCATCTG GTTTTTGTTA CATCAACGAT 600
CTCGTACTAG GAATCCTCGA GCTGTTGAAA CACCATCCTC GGGTGCTCTA CATTGATATA 660
GACGTTCACC ACGGTGATGG AGTTGAAGAG GCTTTTTACT TTACTGACAG AGTGATGACT 720
GTTAGTTTTC ACAAGTTTGG GGATAAGTTC TTTCCAGGGA CCGGCGATGT TAAGGAAATA 780
GGAGAAAGGG AAGGGAAGTT TTACGCCATA AATGTTCCGC TCAGGGATGG GATTGATGAC 840
AGTAGTTTCA ACCGTCTGTT CAGGGCAATA ATTTCAAAGG TGGTTGAGAT ATATCAGCCA 900
GGTGCAATAG TACTTCAGTG TGGAGCAGAT TCACTAGCAA GGGATCGACT AGGATGCTTT 960
AATCTCTCTA TTGATGGACA TGCTGAATGT GTTAAATTCG TCAAGAAATT CAATATTCCT 1020
TTGCTGGTGA CTGGAGGTGG AGGGTACACA AAGGAGAACG TAGCTCGGTG TTGGACCGTT 1080
GAGACTGGCA TTCTTTTGGA CACAGAACTT CCTAATGAGA TTCCTGATAA TGATTATATA 1140
AAGTATTTTG GGCCGGATTA TTCATTGAAG ATTCCTGGTG GTCACATTGA GAATCTAAAT 1200
ACGAAATCGT ATATCAGTAC GATAAAAGCA CAGATTTTGG ATAATTTGAG ATACATCCAG 1260
CACGCTCCAA GCGTGCAGAT GCAGGAGGTT CCACCGGATT TCTACATACC GGATTTTGAT 1320
GAAGACGAAC GAAATCCAGA TGTGCGTGTG GACCAGCGTT CGCGGGATAA GCAGATTCAG 1380
AGGGACGATG AATATTTCGA TGGTGATAAG GATAACGATG CGTCGTAG
1429Nucleotide Fasta Sequence
>Bo3g120880.1|Class-I|Brassica oleracea
ATTGGACCCTCCTCCCTCCTCCTCTCCCTAGTTGCGCTTCGATTCAGTCGTCTCCACTCTTCTCCGAGGAATCGTCTCACATCTATTGAAGCCATAATTGTTGTTAACAGGTCGATCTCGGTTGTAGTTTTTTTTTTCTTAGAAGAGATGCGGTCCAAGGACAAAATCTCCTACTTTTACGATGGAGATGTAGGGAGCGTTTATTTTGGTCCGAATCACCCAATGAAACCTCACAGGCTTTGTATGACCCATCATCTTATCCTTGCATATGGCCTCCATAGCAAGATGGAAGTTTATCGTCCACACAAGGCATACCCTATCGAGATGGCCCAGTTCCATTCTCCAGACTATGTCGAGTTCCTGCAACGAATCAACCCAGAAAATAAGGATTTGTTTCCCAACGAAATGGCTAGATATAATTTAGGAGAGGATTGTCCTGTCTTTGAGGATATGTTCGAGTTTTGTCAAATTTATGCGGGTGCAACCATAGATGCTGCACGCAGATTAAACAACAAACTCTGTGACATTGCGATAAACTGGGCGGGCGGGTTGCACCATGCTAAAAAATGCGATGCATCTGGTTTTTGTTACATCAACGATCTCGTACTAGGAATCCTCGAGCTGTTGAAACACCATCCTCGGGTGCTCTACATTGATATAGACGTTCACCACGGTGATGGAGTTGAAGAGGCTTTTTACTTTACTGACAGAGTGATGACTGTTAGTTTTCACAAGTTTGGGGATAAGTTCTTTCCAGGGACCGGCGATGTTAAGGAAATAGGAGAAAGGGAAGGGAAGTTTTACGCCATAAATGTTCCGCTCAGGGATGGGATTGATGACAGTAGTTTCAACCGTCTGTTCAGGGCAATAATTTCAAAGGTGGTTGAGATATATCAGCCAGGTGCAATAGTACTTCAGTGTGGAGCAGATTCACTAGCAAGGGATCGACTAGGATGCTTTAATCTCTCTATTGATGGACATGCTGAATGTGTTAAATTCGTCAAGAAATTCAATATTCCTTTGCTGGTGACTGGAGGTGGAGGGTACACAAAGGAGAACGTAGCTCGGTGTTGGACCGTTGAGACTGGCATTCTTTTGGACACAGAACTTCCTAATGAGATTCCTGATAATGATTATATAAAGTATTTTGGGCCGGATTATTCATTGAAGATTCCTGGTGGTCACATTGAGAATCTAAATACGAAATCGTATATCAGTACGATAAAAGCACAGATTTTGGATAATTTGAGATACATCCAGCACGCTCCAAGCGTGCAGATGCAGGAGGTTCCACCGGATTTCTACATACCGGATTTTGATGAAGACGAACGAAATCCAGATGTGCGTGTGGACCAGCGTTCGCGGGATAAGCAGATTCAGAGGGACGATGAATATTTCGATGGTGATAAGGATAACGATGCGTCGTAG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
