WERAM Information

Tag Content
WERAM ID WERAM-Sol-0093
Ensembl Protein ID Solyc07g041190.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc07g041190.2 Solyc07g041190.2.1 Solyc07g041190.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.60e-12 48.1 191 241
Organism Solanum lycopersicum
Domain Profile
  Me_Reader PHD
             PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                         t+C +Cg++++ +++++ Cd C++wfH++Cvk++  +++  k++ CpsC +
  Solyc07g041190.2.1 191 TLCGACGENYASDEFWIFCDMCERWFHGNCVKITPAKAEHIKQYKCPSCSN 241
                         78****99999999********************555554479******86 PP
Protein Sequence
(Fasta)		MEGGAQYNPR TVEEVFKDFT GRRTGMIKAL TTDVEDFYHQ CDPEKENLCL YGYPSEQWEV 60
NLPAEEVPPE LPEPALGINF ARDGMQEKEW LALVAVHSDA WLLSVSFYFG ARFGFDRADR 120
KRLFNMMNDL PTIYEVVTGV AKKRVKDKST VSNHSSNKSK SNSKAGKYSK PQVKDEDDGF 180
DEEEEDEHGD TLCGACGENY ASDEFWIFCD MCERWFHGNC VKITPAKAEH IKQYKCPSCS 240
NKRIRP 246
Nucleotide Sequence
(Fasta)		CTCAAAAAGT TGTTTCAAAT TACCAGAAAA ATTGTTTAGA GTGATCCATT GTTAAGATGG 60
AAGGAGGTGC ACAGTACAAT CCTCGCACCG TGGAAGAAGT TTTTAAGGAT TTTACCGGCC 120
GTCGAACCGG CATGATCAAA GCCCTCACCA CTGATGTGGA GGATTTTTAT CATCAATGTG 180
ACCCTGAAAA GGAAAATCTC TGCCTCTATG GATATCCAAG TGAGCAGTGG GAAGTCAATT 240
TGCCAGCTGA GGAGGTGCCT CCAGAGCTTC CAGAGCCAGC ACTAGGTATA AACTTCGCTA 300
GAGATGGGAT GCAAGAAAAG GAATGGTTAG CTCTAGTTGC TGTACATAGT GATGCATGGC 360
TACTCTCTGT TTCCTTCTAT TTTGGTGCCA GATTCGGCTT TGATAGAGCT GACAGGAAAC 420
GTCTTTTCAA CATGATGAAT GATCTGCCAA CAATATATGA AGTTGTTACT GGAGTGGCCA 480
AGAAGAGAGT AAAGGATAAA TCAACAGTTT CAAATCACAG CAGCAACAAG TCAAAATCAA 540
ATTCTAAAGC GGGTAAATAC TCAAAGCCTC AAGTAAAAGA TGAGGATGAT GGATTTGATG 600
AGGAAGAAGA AGATGAACAT GGCGACACTC TGTGTGGTGC ATGTGGTGAG AACTATGCTT 660
CAGATGAATT CTGGATTTTC TGTGACATGT GCGAGAGGTG GTTCCATGGA AACTGTGTGA 720
AGATCACCCC TGCCAAGGCC GAGCATATAA AGCAGTACAA ATGCCCTTCA TGCAGCAACA 780
AGAGGATACG CCCATGACAT CCCCTATCAG ATATGTGCTG AGTTCCACAA CTTGTAATTG 840
TTCATGTTGA GCTCAGCTCA CTGCCATCTT ACAAATATCA GTAAGGCATG TGTAGTCAGA 900
GTCCTAGTCT CTTATGTTTA TCAGGGTGCT TAACTAGTTT AGTTCCCTCA AGACACCCTT 960
TTATTCAACT CTAAACAATT GGATATTAGA TGCATAAACT TTCAGTATCA AATGCTAACT 1020
AAACGCAGTT CGTCTG 1037
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 80 4e-92 334
WERAM-Thc-0077 EOY27191 Theobroma cacao 79 7e-91 330
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 81 5e-90 327
WERAM-Prp-0082 EMJ27202 Prunus persica 76 3e-89 325
WERAM-Glm-0102 GLYMA09G07970.1 Glycine max 77 3e-88 321
WERAM-Amt-0032 ERN11177 Amborella trichopoda 79 1e-85 313
WERAM-Met-0172 KEH18446 Medicago truncatula 67 2e-85 312
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 73 3e-85 311
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 69 4e-84 308
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 74 8e-84 306
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 71 1e-82 303
WERAM-Bro-0027 Bo2g021880.1 Brassica oleracea 67 1e-81 300
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 70 3e-80 295
WERAM-Orbr-0088 OB07G27390.1 Oryza brachyantha 67 4e-79 291
WERAM-Brd-0009 BRADI1G21740.1 Brachypodium distachyon 66 4e-78 288
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 68 8e-78 287
WERAM-Sob-0124 Sb09g020610.1 Sorghum bicolor 67 3e-77 285
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 67 4e-77 285
WERAM-Sei-0086 Si023009m Setaria italica 66 4e-77 285
WERAM-Tra-0074 Traes_2BS_9C7CA760D.1 Triticum aestivum 64 2e-76 282
WERAM-Orm-0026 OMERI02G20640.1 Oryza meridionalis 66 2e-76 282
WERAM-Ori-0001 BGIOSGA000361-PA Oryza indica 68 4e-76 281
WERAM-Ors-0008 OS01T0887700-01 Oryza sativa 68 5e-76 281
WERAM-Orr-0011 ORUFI01G43190.1 Oryza rufipogon 68 5e-76 281
WERAM-Orp-0013 OPUNC01G38560.1 Oryza punctata 68 5e-76 281
WERAM-Orni-0011 ONIVA01G44710.1 Oryza nivara 68 5e-76 281
WERAM-Orgl-0011 OGLUM01G44060.1 Oryza glumaepatula 68 5e-76 281
WERAM-Org-0012 ORGLA01G0337500.1 Oryza glaberrima 68 5e-76 281
WERAM-Orb-0011 OBART01G39820.1 Oryza barthii 68 5e-76 281
WERAM-Lep-0029 LPERR02G16910.1 Leersia perrieri 66 2e-75 279
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 70 6e-75 277
WERAM-Aet-0106 EMT19247 Aegilops tauschii 65 7e-74 273
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 69 1e-72 270
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 69 5e-68 254
Created Date 25-Jun-2016