WERAM Information

Tag Content
WERAM ID WERAM-Sob-0086
Ensembl Protein ID Sb06g015420.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb06g015420 Sb06g015420.1 Sb06g015420.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 5.20e-163 542.8 6 317
Organism Sorghum bicolor
Domain Profile
  HDAC Class-I
    class-1.txt   2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdg 97 
                    +++y+yd dvg++++g +hpmkp+rl++th+Lvl+ygl+kk+ei++p+ka   el++fhs +y+efl++++p++++ +++el+++n+gedcPvfd+
  Sb06g015420.1   6 RISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYGLHKKMEIYRPHKAYPIELAQFHSADYVEFLHRITPDTQHLYASELTRYNLGEDCPVFDN 101
                    689********************************************************************************************* PP
    class-1.txt  98 lfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhky 193
                    lfe+cq++tG++l+aa++Ln+k++diainwaGGlhhakk+easGfcy+nD+vl+ilellk+h rvlyidid+hhGDgveeafy+tdrvmtvsfhky
  Sb06g015420.1 102 LFEFCQIYTGGTLDAARRLNHKTCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKY 197
                    ************************************************************************************************ PP
    class-1.txt 194 geeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpll 289
                    g+ ffPgtGd++d+g+ +gkyya+n+PlkdgidD+s++++fk++i kvie++ P a+vlqcGaDsla+Drlg+fnlsi+ghaecvkfvk+fn+pll
  Sb06g015420.1 198 GDLFFPGTGDIKDIGEREGKYYAINIPLKDGIDDSSFTRLFKTIIAKVIETYLPGAIVLQCGADSLARDRLGCFNLSIEGHAECVKFVKKFNIPLL 293
                    ************************************************************************************************ PP
    class-1.txt 290 vlGGGGYtlrnvaRcwtyetavvl 313
                    v GGGGYt++nvaRcw++et+v+l
  Sb06g015420.1 294 VTGGGGYTKENVARCWAVETGVLL 317
                    **********************97 PP
Protein Sequence
(Fasta)		MLEKDRISYF YDGDVGNVYF GPNHPMKPHR LCMTHHLVLS YGLHKKMEIY RPHKAYPIEL 60
AQFHSADYVE FLHRITPDTQ HLYASELTRY NLGEDCPVFD NLFEFCQIYT GGTLDAARRL 120
NHKTCDIAIN WAGGLHHAKK CEASGFCYIN DLVLGILELL KYHARVLYID IDVHHGDGVE 180
EAFYFTDRVM TVSFHKYGDL FFPGTGDIKD IGEREGKYYA INIPLKDGID DSSFTRLFKT 240
IIAKVIETYL PGAIVLQCGA DSLARDRLGC FNLSIEGHAE CVKFVKKFNI PLLVTGGGGY 300
TKENVARCWA VETGVLLDTE LPNEIPNNEY IEYFAPDYTL KVPNLNMDNL NSKTYLSSIK 360
VQVMESLRSI QHAPGVQMQE VPPDFYIPDF DEDELDPDER VDQHTQDKQI HRDDEYYEGD 420
NDNDHDDGAR
Nucleotide Sequence
(Fasta)		ATGCTGGAGA AAGACCGGAT ATCCTACTTC TACGACGGAG ATGTTGGCAA TGTCTACTTT 60
GGGCCAAATC ACCCCATGAA GCCTCATCGT CTCTGTATGA CACATCACCT TGTTCTTTCA 120
TATGGACTTC ATAAAAAGAT GGAGATATAT AGACCACACA AAGCATATCC AATAGAGCTT 180
GCCCAGTTCC ATTCTGCTGA TTATGTGGAA TTCTTGCACC GGATAACTCC TGACACCCAG 240
CACCTATATG CAAGTGAATT AACCAGATAC AATCTTGGAG AAGACTGTCC GGTCTTTGAT 300
AATTTGTTTG AGTTCTGCCA AATCTATACT GGAGGAACTT TAGATGCTGC TCGCAGATTA 360
AATCATAAAA CATGTGACAT CGCCATTAAT TGGGCTGGTG GGCTGCATCA TGCCAAAAAG 420
TGTGAGGCGT CAGGCTTCTG TTACATTAAT GATCTAGTAT TAGGAATTCT GGAGCTTCTG 480
AAGTACCATG CCAGGGTTCT TTATATTGAC ATTGATGTCC ATCATGGAGA TGGAGTTGAA 540
GAAGCCTTTT ATTTCACTGA CAGGGTAATG ACTGTGAGCT TCCACAAATA TGGTGATCTG 600
TTCTTTCCTG GAACGGGTGA TATTAAGGAT ATAGGAGAAA GGGAAGGAAA ATATTATGCC 660
ATCAACATTC CACTTAAAGA TGGGATAGAT GACTCTAGCT TTACTCGACT TTTTAAAACA 720
ATTATTGCCA AAGTTATTGA GACATATCTG CCTGGTGCTA TTGTTCTGCA ATGTGGGGCT 780
GATTCATTGG CGAGGGACCG TCTAGGCTGC TTCAACCTCT CCATTGAAGG CCATGCTGAA 840
TGTGTAAAGT TTGTCAAGAA ATTCAACATT CCTCTTCTGG TAACTGGAGG TGGTGGATAC 900
ACCAAGGAGA ATGTAGCAAG ATGTTGGGCT GTTGAAACTG GGGTCCTTTT AGACACAGAA 960
CTCCCAAATG AGATTCCAAA CAATGAATAC ATCGAGTACT TTGCTCCAGA TTATACACTG 1020
AAAGTTCCAA ATTTGAACAT GGACAATTTG AACAGTAAGA CCTATCTCAG TTCAATCAAA 1080
GTGCAAGTGA TGGAGAGTTT GCGGTCCATA CAGCATGCTC CTGGTGTTCA AATGCAAGAG 1140
GTTCCTCCAG ATTTTTATAT CCCAGATTTT GACGAAGATG AATTGGATCC TGATGAACGC 1200
GTTGACCAGC ATACCCAAGA CAAGCAGATT CACCGTGATG ATGAGTACTA TGAAGGTGAC 1260
AATGACAACG ATCACGACGA TGGCGCACGC TAATCTGCTT CCAAGGAACC GGTGTAAATG 1320
GAAACTGTTG TTGTGTAGCT CAGCAGCCTT GTGATGGAGT AGTTTGTCAG TCGACAGTAG 1380
GATCTAACTT AGCAGGTCAA AGTGATTGTG ACCCCTCCTG AATTACACAT TCTAGTACAA 1440
CTTTGCTCAT TTTTCAGCAT GCAAGAATGC AAATTTCTCA GTGGTACTGG T 1492
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sei-0035 Si010167m Setaria italica 98 0.0 816
WERAM-Tra-0038 Traes_2AL_1E7A00DC5.1 Triticum aestivum 97 0.0 809
WERAM-Brd-0123 BRADI5G09190.1 Brachypodium distachyon 96 0.0 808
WERAM-Orp-0042 OPUNC04G09700.1 Oryza punctata 96 0.0 803
WERAM-Orni-0039 ONIVA04G09660.1 Oryza nivara 96 0.0 801
WERAM-Ori-0051 BGIOSGA016344-PA Oryza indica 96 0.0 801
WERAM-Orgl-0043 OGLUM04G11380.3 Oryza glumaepatula 96 0.0 801
WERAM-Orbr-0052 OB04G18820.1 Oryza brachyantha 96 0.0 801
WERAM-Org-0044 ORGLA04G0087200.1 Oryza glaberrima 95 0.0 801
WERAM-Orr-0042 ORUFI04G12890.1 Oryza rufipogon 95 0.0 792
WERAM-Zem-0071 GRMZM2G119703_P01 Zea mays 98 0.0 791
WERAM-Orb-0042 OBART04G11700.1 Oryza barthii 95 0.0 790
WERAM-Tru-0028 TRIUR3_16261-P1 Triticum urartu 96 0.0 763
WERAM-Mua-0089 GSMUA_Achr6P17260_001 Musa acuminata 87 0.0 756
WERAM-Prp-0063 EMJ06433 Prunus persica 86 0.0 746
WERAM-Viv-0093 VIT_15s0021g00610.t01 Vitis vinifera 87 0.0 745
WERAM-Met-0097 AES88434 Medicago truncatula 87 0.0 743
WERAM-Amt-0048 ERN13133 Amborella trichopoda 87 0.0 743
WERAM-Thc-0114 EOY33523 Theobroma cacao 86 0.0 743
WERAM-Pot-0020 POPTR_0001s46430.1 Populus trichocarpa 87 0.0 742
WERAM-Glm-0143 GLYMA12G09190.1 Glycine max 87 0.0 742
WERAM-Sol-0138 Solyc11g067020.1.1 Solanum lycopersicum 85 0.0 736
WERAM-Art-0082 AT3G44680.1 Arabidopsis thaliana 82 0.0 720
WERAM-Bro-0059 Bo3g120880.1 Brassica oleracea 81 0.0 714
WERAM-Brr-0098 Bra019424.1-P Brassica rapa 81 0.0 712
WERAM-Orl-0026 KN538765.1_FGP002 Oryza longistaminata 87 0.0 711
WERAM-Arl-0024 fgenesh1_pg.C_scaffold_5000937 Arabidopsis lyrata 80 0.0 706
WERAM-Aet-0101 EMT12816 Aegilops tauschii 96 0.0 706
WERAM-Php-0035 PP1S180_68V6.1 Physcomitrella patens 82 0.0 701
WERAM-Sem-0137 EFJ33452 Selaginella moellendorffii 81 0.0 691
WERAM-Sot-0082 PGSC0003DMT400068240 Solanum tuberosum 79 0.0 664
WERAM-Orm-0045 OMERI04G10320.1 Oryza meridionalis 97 2e-179 625
WERAM-Chr-0011 EDP01149 Chlamydomonas reinhardtii 62 5e-159 558
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 65 3e-157 552
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 65 3e-157 551
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 64 5e-157 551
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 64 5e-157 551
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 64 5e-157 551
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 64 5e-157 551
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 64 6e-157 551
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 64 7e-157 551
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 64 9e-157 550
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 64 9e-157 550
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 64 9e-157 550
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 64 1e-156 550
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 64 1e-156 550
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 64 1e-156 550
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 64 1e-156 550
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 64 2e-155 546
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 64 2e-155 546
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 64 2e-155 546
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 63 2e-155 546
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 64 3e-155 545
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 64 5e-155 545
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 63 1e-154 543
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 64 2e-154 543
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 65 7e-154 540
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 65 1e-153 540
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 63 4e-153 538
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 65 4e-153 538
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 64 7e-153 537
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 63 4e-152 535
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 63 5e-152 535
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 63 2e-151 532
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 63 4e-151 531
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 65 8e-151 530
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 64 1e-150 530
WERAM-Xim-0002 ENSXMAP00000000390.1 Xiphophorus maculatus 65 1e-150 530
WERAM-Orla-0151 ENSORLP00000017757.1 Oryzias latipes 65 2e-150 530
WERAM-Pof-0067 ENSPFOP00000005770.2 Poecilia formosa 65 2e-150 530
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 62 2e-150 529
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 63 2e-150 529
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 65 2e-150 529
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 65 4e-150 528
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 64 6e-150 528
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 65 6e-150 527
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 62 6e-150 527
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 65 7e-150 527
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 64 8e-150 527
WERAM-Osl-0001 ABO94696 Ostreococcus lucimarinus 63 8e-150 527
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 64 1e-149 526
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 63 1e-149 526
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 64 1e-149 526
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 64 2e-149 526
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 64 2e-149 526
WERAM-Coi-0024 EAS33504 Coccidioides immitis 61 3e-149 525
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 62 3e-149 525
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 64 7e-149 524
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 62 1e-148 523
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 59 2e-148 522
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 65 2e-147 519
WERAM-Caa-0018 KGT69072 Candida albicans 60 1e-146 516
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 64 2e-146 516
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 60 4e-146 514
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 61 5e-146 514
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 64 9e-146 514
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 63 4e-145 511
WERAM-Trv-0003 EHK19072 Trichoderma virens 61 2e-144 509
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 60 3e-144 508
WERAM-Caj-0192 ENSCJAP00000033421.2 Callithrix jacchus 60 3e-144 508
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 59 7e-144 508
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 59 7e-144 507
WERAM-Kop-0004 CAY67954 Komagataella pastoris 60 8e-144 507
WERAM-Cag-0003 CAG57932 Candida glabrata 60 9e-144 507
WERAM-Cis-0077 ENSCSAVP00000016740.1 Ciona savignyi 58 3e-143 505
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 59 4e-143 504
WERAM-Trr-0017 EGR48353 Trichoderma reesei 61 5e-143 504
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 60 2e-142 503
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 59 2e-142 503
WERAM-Asg-0034 AAS54885 Ashbya gossypii 59 3e-142 502
Created Date 25-Jun-2016