WERAM Information

Tag Content
WERAM ID WERAM-Sot-0076
Ensembl Protein ID PGSC0003DMT400061991
Gene Name PGSC0003DMG400024125
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400024125 PGSC0003DMT400061991 PGSC0003DMT400061991
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 6.00e-17 62.9 125 178
Organism Solanum tuberosum
Domain Profile
  Ac_Reader Bromodomain
             BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDv 54 
                           +h++ ++F epv+ + l ++dY+ iik+PmdL tik+rl ++ Y+sp ef++D+
  PGSC0003DMT400061991 125 KHKHRWVFDEPVNVEgLGLHDYHAIIKHPMDLGTIKARLSQNLYKSPREFAEDI 178
                           79999************************************************7 PP
Protein Sequence
(Fasta)		MASYTDGLNR EHAELDSTVK PVISRVRDRI RINIGGATSR VEIRGIMRDL VGELDQIRSS 60
VTELEAKDLQ LTTHDTNTNG CYNNIGRITA IPTGAVNSYS QPRYIDNDVT NSRALVRVNL 120
ERLMKHKHRW VFDEPVNVEG LGLHDYHAII KHPMDLGTIK ARLSQNLYKS PREFAEDIIK 180
KKNSTFYQHD DEIEVDIDNV DAESFWELER FVTNYKKNLS KQKRKDELAL QARGTARTAP 240
VMNSAPMVAG ALNSNTGKNN TSALATNAEA GRQMDNARRS LSSSSSSSDS GSSPSDSDCD 300
SSSGSGSKVG H 311
Nucleotide Sequence
(Fasta)		ATGGCGAGTT ATACAGATGG ATTAAATAGA GAGCATGCTG AGCTGGATTC AACAGTTAAG 60
CCTGTAATTT CTAGGGTTCG AGATAGAATT AGGATTAATA TAGGGGGAGC GACATCAAGA 120
GTTGAGATTA GAGGTATTAT GAGGGACTTA GTGGGTGAGC TTGATCAGAT TAGGAGTTCA 180
GTTACAGAGC TTGAAGCTAA GGACCTTCAG CTGACCACAC ATGATACAAA TACTAATGGT 240
TGTTATAATA ATATTGGTAG GATTACTGCT ATTCCTACTG GTGCTGTTAA TTCTTATAGT 300
CAACCACGAT ATATCGATAA TGATGTGACG AATAGTAGGG CTTTAGTGCG AGTGAATTTA 360
GAGAGGTTAA TGAAGCACAA GCATAGATGG GTGTTTGATG AGCCAGTGAA TGTGGAGGGT 420
CTTGGGCTGC ATGATTATCA TGCTATCATC AAGCATCCTA TGGATTTGGG CACTATCAAA 480
GCTAGGCTGT CTCAAAATTT GTACAAATCT CCCAGGGAGT TTGCTGAGGA TATTATTAAG 540
AAGAAGAACT CAACATTTTA TCAACATGAT GATGAGATTG AAGTAGACAT AGACAATGTT 600
GATGCGGAAA GCTTCTGGGA GCTTGAAAGG TTTGTGACCA ATTACAAAAA GAACTTAAGC 660
AAGCAGAAGA GAAAGGATGA ACTTGCTCTG CAAGCCAGAG GAACTGCACG GACTGCCCCA 720
GTTATGAATT CTGCTCCTAT GGTTGCTGGT GCACTAAACA GTAATACTGG TAAAAATAAC 780
ACTAGTGCTC TTGCTACAAA TGCAGAAGCG GGAAGACAGA TGGATAATGC AAGGAGGTCT 840
CTTAGTTCAA GCAGTTCCAG CAGCGATTCA GGTTCATCCC CAAGTGATTC CGATTGCGAT 900
AGTTCCTCTG GATCCGGATC AAAAGTGGGC CATTGA 937
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0141 Solyc12g014170.1.1 Solanum lycopersicum 73 1e-49 194
WERAM-Thc-0011 EOX94205 Theobroma cacao 78 3e-25 113
WERAM-Mua-0014 GSMUA_Achr10P27900_001 Musa acuminata 44 9e-25 111
WERAM-Brr-0152 Bra030643.1-P Brassica rapa 78 1e-24 110
WERAM-Bro-0142 Bo8g006010.1 Brassica oleracea 78 3e-24 109
WERAM-Glm-0172 GLYMA13G36821.1 Glycine max 75 3e-24 109
WERAM-Prp-0041 EMJ12560 Prunus persica 76 5e-24 108
WERAM-Viv-0121 VIT_19s0014g01650.t01 Vitis vinifera 75 6e-24 108
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 44 1e-23 107
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 73 2e-23 107
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 44 2e-23 107
WERAM-Amt-0025 ERN13953 Amborella trichopoda 71 6e-23 105
WERAM-Met-0055 KEH39253 Medicago truncatula 73 5e-22 102
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 66 3e-20 96.3
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 68 3e-20 96.3
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 68 4e-20 95.9
WERAM-Sei-0009 Si001167m Setaria italica 66 5e-20 95.5
WERAM-Zem-0130 GRMZM2G400907_P01 Zea mays 66 6e-20 95.5
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 68 7e-20 95.1
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 68 7e-20 95.1
WERAM-Orni-0021 ONIVA02G11900.1 Oryza nivara 68 8e-20 95.1
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 40 8e-20 95.1
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 68 8e-20 95.1
WERAM-Orr-0021 ORUFI02G10640.1 Oryza rufipogon 68 8e-20 95.1
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 68 9e-20 94.7
WERAM-Orm-0024 OMERI02G11670.1 Oryza meridionalis 68 9e-20 94.7
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 68 1e-19 94.4
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 68 1e-19 94.4
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 40 2e-19 94.0
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 66 2e-19 94.0
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 66 2e-19 94.0
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 68 3e-19 92.8
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 64 3e-18 89.7
WERAM-Aet-0072 EMT26738 Aegilops tauschii 64 3e-18 89.7
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 58 6e-17 85.5
WERAM-Orla-0063 ENSORLP00000008149.1 Oryzias latipes 58 4e-15 79.3
WERAM-Orn-0021 ENSONIP00000002329.1 Oreochromis niloticus 56 2e-13 73.9
WERAM-Xim-0164 ENSXMAP00000013480.1 Xiphophorus maculatus 42 2e-13 73.6
WERAM-Pof-0078 ENSPFOP00000007050.2 Poecilia formosa 42 2e-13 73.6
WERAM-Drm-0012 FBpp0071074 Drosophila melanogaster 51 7e-13 72.0
WERAM-Cae-0070 Y119C1B.8a Caenorhabditis elegans 55 9e-13 71.6
WERAM-Tar-0179 ENSTRUP00000037735.1 Takifugu rubripes 59 1e-12 71.2
WERAM-Leo-0036 ENSLOCP00000005834.1 Lepisosteus oculatus 54 1e-12 71.2
WERAM-Lac-0022 ENSLACP00000003855.1 Latimeria chalumnae 53 1e-12 70.9
WERAM-Ten-0049 ENSTNIP00000004900.1 Tetraodon nigroviridis 53 1e-12 70.9
WERAM-Xet-0111 ENSXETP00000037202.3 Xenopus tropicalis 50 4e-12 69.7
WERAM-Gaa-0105 ENSGACP00000013356.1 Gasterosteus aculeatus 53 4e-12 69.3
WERAM-Anc-0036 ENSACAP00000004148.2 Anolis carolinensis 49 5e-12 68.9
WERAM-Pem-0074 ENSPMAP00000008062.1 Petromyzon marinus 57 6e-12 68.9
WERAM-Meg-0092 ENSMGAP00000008728.2 Meleagris gallopavo 57 6e-12 68.9
WERAM-Fia-0029 ENSFALP00000001836.1 Ficedula albicollis 41 6e-12 68.9
WERAM-Ect-0061 ENSETEP00000006671.1 Echinops telfairi 40 6e-12 68.9
WERAM-Pes-0043 ENSPSIP00000006386.1 Pelodiscus sinensis 59 7e-12 68.6
WERAM-Prc-0094 ENSPCAP00000008495.1 Procavia capensis 40 8e-12 68.6
WERAM-Hos-0259 ENSP00000405050.1 Homo sapiens 40 9e-12 68.2
WERAM-Eqc-0079 ENSECAP00000010277.1 Equus caballus 40 9e-12 68.2
WERAM-Tub-0130 ENSTBEP00000014498.1 Tupaia belangeri 40 9e-12 68.2
WERAM-Dan-0048 ENSDNOP00000004798.3 Dasypus novemcinctus 40 9e-12 68.2
WERAM-Gaga-0001 ENSGALP00000000211.4 Gallus gallus 50 1e-11 68.2
WERAM-Dio-0036 ENSDORP00000004207.1 Dipodomys ordii 40 1e-11 68.2
WERAM-Caf-0006 ENSCAFP00000001265.3 Canis familiaris 40 1e-11 68.2
WERAM-Poa-0157 ENSPPYP00000019309.1 Pongo abelii 40 1e-11 68.2
WERAM-Pat-0149 ENSPTRP00000030782.4 Pan troglodytes 40 1e-11 68.2
WERAM-Caj-0224 ENSCJAP00000040148.2 Callithrix jacchus 40 1e-11 68.2
WERAM-Ptv-0132 ENSPVAP00000011321.1 Pteropus vampyrus 40 1e-11 68.2
WERAM-Mup-0018 ENSMPUP00000001938.1 Mustela putorius furo 40 1e-11 68.2
WERAM-Loa-0152 ENSLAFP00000013518.3 Loxodonta africana 40 1e-11 68.2
WERAM-Sus-0016 ENSSSCP00000001595.1 Sus scrofa 40 1e-11 68.2
WERAM-Ict-0092 ENSSTOP00000009696.2 Ictidomys tridecemlineatus 40 1e-11 68.2
WERAM-Bot-0108 ENSBTAP00000014704.5 Bos taurus 40 1e-11 68.2
Created Date 25-Jun-2016