WERAM Information

Tag Content
WERAM ID WERAM-Sot-0062
Ensembl Protein ID PGSC0003DMT400054000
Gene Name PGSC0003DMG400020951
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400020951 PGSC0003DMT400054000 PGSC0003DMT400054000
PGSC0003DMG400020951 PGSC0003DMT400054001 PGSC0003DMT400054001
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 8.30e-13 49.8 65 115
Organism Solanum tuberosum
Domain Profile
  Me_Reader PHD
               PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                           t+C +Cg++++ +++++ Cd C++wfH++Cvk++  +++  k++ CpsC +
  PGSC0003DMT400054000  65 TLCGACGENYASDEFWIFCDMCERWFHGNCVKITPAKAEHIKQYKCPSCSN 115
                           78****99999999********************555554479******86 PP
Protein Sequence
(Fasta)		MNDLPTIYEV VTGVAKKKVK DKSTVSNHSS NKSKSNSKAG KYSKPQVKDE DDGFDEEEED 60
EHGDTLCGAC GENYASDEFW IFCDMCERWF HGNCVKITPA KAEHIKQYKC PSCSNKRILP 120
Nucleotide Sequence
(Fasta)		CAAGCCTTTG CTGTGTCACT TTGTAAAGCA TTCTGGAGGG ATGCTTATAA TTACACCTTG 60
TCAGATGTCA AAGCTTGGAG GAGTATTGTC CCAGCAGGCA TCTGTGTAAT TTCTTTGATG 120
GAGAAAAACA ATTATTTCCT TCGTTTAGAG TCTACCGAGT ATGGAAAGTT TCTTCACTTT 180
ACTGAATCCT TTTGATCTCT TTAATCTAGG AAACGCCTTT TCAACATGAT GAATGATCTG 240
CCAACAATAT ATGAAGTTGT TACTGGAGTG GCCAAGAAGA AAGTAAAGGA TAAATCAACA 300
GTTTCAAATC ACAGCAGCAA CAAGTCAAAA TCAAATTCTA AAGCGGGTAA ATACTCAAAG 360
CCTCAAGTAA AAGATGAGGA TGATGGATTC GATGAGGAAG AAGAAGATGA ACATGGCGAT 420
ACTCTGTGTG GTGCATGTGG TGAGAACTAC GCTTCAGATG AATTCTGGAT TTTCTGTGAC 480
ATGTGCGAGA GGTGGTTCCA TGGCAACTGT GTGAAGATCA CCCCCGCCAA GGCCGAGCAT 540
ATAAAGCAGT ACAAATGCCC TTCATGCAGC AACAAGAGGA TACTCCCGTG ACATCCCCTA 600
TCAGATATGT GCTGAGTTCC ACAACTTGTA ATTGTTCATG TTGAGCTCAG CTCACTGTCA 660
TCTTACAAAT ATCAGCAAGG AATGTGTAGT CAGAGTTCTA GTCTCTTACG TTTATCAGGG 720
TGCTTAACTA GTTTAGTTCC CTCAAGACAT CCTTTTATTC AACTCTAAAC AATTGGATAT 780
TAGATGCATC TTTCAGTATC AATTCTAACT AAATGCAGTT CATCTGGAGC ATATGTTGCA 840
GCTGTAGTTT TTGGGTGCTC CTTGTTTGAT CATAAAACGT GTTCTTAATG ATTTCAAACG 900
CAAGTAAATG ATGTGATTTG GAATGACTGC TGAGCATTTG CCTCATCATG GTTACAGCTT 960
GCGAGCTAGT TGACTGGTTA CAGATTAGGC AGAATAAAAC ACGTCAATCA AGATTGAATT 1020
ATGTACTTAA TGGGCGATGT GAGATATAAT CGTGCTGGTC TTGTAGTAGC TTCATTTGCT 1080
GAAATGATAT ACGTTCTGCT GTATCTGCAA GCTGCTCTCC CCTTGGTTCA ATGTGAAAAT 1140
CCTTTATTGC CATGGTTGAA TCTCCTCTAT CTTGTATCTT CACAAAATAT CCATTGAAGA 1200
AGTTACTTAT TATGATACCT AAATCTATTG TTTCCGTTTT TCCTTTCAAC TATGCCTTTT 1260
CTCTTTTATT TTGTTTTAGA GATATACATC ACTAGATCTT AATTTACAAG GTAGGGGGTC 1320
ATTGCCAATT ACATTAGAAT TTGTTATTGG TCTTTTTCTA GTTGTGTCCT GTATTCAACA 1380
TTGGTAAGCC TAATAATTTA 1401
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0093 Solyc07g041190.2.1 Solanum lycopersicum 98 1e-39 157
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 71 1e-30 127
WERAM-Thc-0077 EOY27191 Theobroma cacao 72 2e-30 127
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 66 2e-30 127
WERAM-Glm-0102 GLYMA09G07970.1 Glycine max 67 9e-30 125
WERAM-Prp-0082 EMJ27202 Prunus persica 64 1e-29 124
WERAM-Mua-0096 GSMUA_Achr6P28820_001 Musa acuminata 60 1e-28 121
WERAM-Amt-0088 ERM99796 Amborella trichopoda 63 1e-28 121
WERAM-Met-0172 KEH18446 Medicago truncatula 67 1e-27 118
WERAM-Brr-0011 Bra002307.1-P Brassica rapa 55 1e-27 118
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 54 4e-27 116
WERAM-Bro-0179 Bo9g151850.1 Brassica oleracea 55 5e-27 116
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 54 6e-27 115
WERAM-Orp-0023 OPUNC02G18840.1 Oryza punctata 56 7e-27 115
WERAM-Orm-0026 OMERI02G20640.1 Oryza meridionalis 56 1e-26 114
WERAM-Lep-0029 LPERR02G16910.1 Leersia perrieri 57 2e-26 114
WERAM-Sob-0072 Sb04g023220.1 Sorghum bicolor 58 3e-26 113
WERAM-Ors-0047 OS05T0163100-01 Oryza sativa 56 4e-26 113
WERAM-Orr-0023 ORUFI02G21900.1 Oryza rufipogon 56 5e-26 112
WERAM-Orni-0023 ONIVA02G22970.1 Oryza nivara 56 5e-26 112
WERAM-Ori-0026 BGIOSGA008446-PA Oryza indica 56 5e-26 112
WERAM-Orgl-0025 OGLUM02G21140.1 Oryza glumaepatula 56 5e-26 112
WERAM-Org-0024 ORGLA02G0179500.1 Oryza glaberrima 56 5e-26 112
WERAM-Orb-0024 OBART02G20890.1 Oryza barthii 56 5e-26 112
WERAM-Orl-0073 KN539572.1_FGP001 Oryza longistaminata 56 5e-26 112
WERAM-Zem-0047 GRMZM2G063864_P01 Zea mays 57 1e-25 111
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 59 6e-25 109
WERAM-Brd-0086 BRADI3G46110.1 Brachypodium distachyon 56 6e-25 109
WERAM-Aet-0091 EMT03181 Aegilops tauschii 88 8e-25 108
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 49 3e-24 107
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 49 3e-24 106
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 61 4e-24 106
WERAM-Sei-0086 Si023009m Setaria italica 54 5e-24 106
WERAM-Sem-0147 EFJ25244 Selaginella moellendorffii 57 2e-23 104
Created Date 25-Jun-2016