WERAM Information

Tag Content
WERAM ID WERAM-Glm-0240
Ensembl Protein ID GLYMA18G43120.1
Gene Name GLYMA_18G201700
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GLYMA18G43120 GLYMA18G43120.1 GLYMA18G43120.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.80e-12 48.4 184 233
Organism Glycine max
Domain Profile
  Me_Reader PHD
          PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                      t+C  Cg +++ ++++++Cd C++wfH+kCvk++  ++++ k++ CpsC 
  GLYMA18G43120.1 184 TLCGSCGGNYNADEFWICCDICERWFHGKCVKITPAKAESIKQYKCPSCS 233
                      78****888888889*******************555554489******6 PP
Protein Sequence
(Fasta)		MDMASSPRTV EEIFKDYGAR RTAVIRALTH DVDEFYGLCD PDKDNLCLYG HPNEAWEVTL 60
PAEEVPPELP EPALGINFAR DGMNRRDWLS LVAVHSDSWL VSVAFYLGAR LNRNERKRLF 120
SLINDLPSVF EVVTDRKPVK DKPTADSGSK SRGSAKRSSD EQVKSNPKFV DEGYEEDEDE 180
HNETLCGSCG GNYNADEFWI CCDICERWFH GKCVKITPAK AESIKQYKCP SCSLRRGRP 239
Nucleotide Sequence
(Fasta)		CCACTTATTA ATTGGTCTAG ACTTAATTTT TCTTATTAGT GGAAAGCAAA CAAGGGTTAG 60
AGGTGGGAAA CAGAGGACTA GAGGAAGCAA TTTAGCCTCA TTGAGTTGAG TGAGTACTAC 120
TACTTATACA CATTCTATTC TTCAACAAAC ATTGTAGTTT GATCAAATTC CCATGGTCTC 180
TCTCTCTCCA ATTAATTCGA TTTAGCTTTT CCCCAAATCC CAAACCCTTT CTTTCGCTTA 240
GATCCCAATC CAATTGGGTT ATGGACATGG CTTCCAGTCC CCGCACCGTT GAAGAGATCT 300
TCAAGGATTA CGGCGCCAGA AGAACTGCCG TTATTCGCGC TCTCACTCAC GACGTTGATG 360
AATTTTACGG CCTCTGTGAT CCAGATAAGG ATAACCTGTG CCTCTATGGA CATCCAAATG 420
AGGCCTGGGA AGTAACTCTG CCAGCGGAGG AAGTTCCGCC AGAGCTCCCT GAGCCTGCTC 480
TTGGAATCAA TTTTGCTAGG GATGGCATGA ACCGCAGGGA CTGGCTTTCT CTTGTTGCTG 540
TGCACAGTGA TTCGTGGTTG GTTTCTGTGG CCTTTTACCT CGGGGCTCGT CTTAACCGCA 600
ATGAAAGGAA ACGTTTATTT AGCTTGATCA ATGATCTTCC ATCTGTTTTT GAAGTTGTGA 660
CTGACAGGAA ACCAGTTAAG GACAAGCCAA CTGCAGATAG TGGAAGCAAG TCTAGGGGAA 720
GTGCCAAGAG ATCTAGTGAT GAGCAAGTTA AAAGCAACCC AAAGTTTGTA GATGAGGGTT 780
ATGAGGAGGA TGAAGATGAG CATAATGAAA CACTTTGTGG AAGCTGCGGC GGAAATTACA 840
ATGCTGATGA GTTTTGGATT TGCTGTGACA TATGTGAGAG GTGGTTCCAC GGGAAGTGTG 900
TTAAGATTAC CCCTGCAAAG GCTGAGAGCA TAAAGCAATA TAAATGTCCA TCATGCAGCC 960
TGAGGCGGGG CAGGCCATAG ACTGAAGGTG ATGGAATGGG TACATGTGAG GTGAGTGTTG 1020
TTTCGTGGTT GACAAGATAC TGTAACTTTG TTACATCACT TACAGAAGTT CATGTAATGG 1080
GCATAGTATT GATGCTTAAG GGCAAATTTA TCAGGGATTA AGTTTGTTTT TACCAGATGA 1140
ACGTTGATGG ATGTTACAGA GTATAGAATA GAGCATGGCA AATTTTAATT TGATGATTAG 1200
TTTATATTTA GTTGAATATT TGCTTGAACT TACATATTGT AATTTATTTA TTTATTTTTA 1260
ACATTGTTTA AGAAGACAAA ACCTTTTCCC CTCCACAGAT TCTTCTAATC AAACTTTCAT 1320
TATGCTGCTT GATGGGTTAA TGAAAAGATT ATGTGAGTGG ATTCTTGAAG CGCAGGACTT 1380
TGACGAAAAA GAAACTGAAT TATGTGTC 1409
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0059 EOY07191 Theobroma cacao 87 3e-97 352
WERAM-Prp-0083 EMJ07006 Prunus persica 88 1e-96 349
WERAM-Met-0092 KEH28874 Medicago truncatula 88 2e-96 348
WERAM-Pot-0074 POPTR_0006s10180.1 Populus trichocarpa 84 4e-93 337
WERAM-Viv-0060 VIT_08s0105g00360.t01 Vitis vinifera 83 8e-92 333
WERAM-Sot-0075 PGSC0003DMT400059399 Solanum tuberosum 81 1e-89 326
WERAM-Sol-0105 Solyc09g005360.2.1 Solanum lycopersicum 81 7e-89 323
WERAM-Mua-0107 GSMUA_Achr7P15530_001 Musa acuminata 78 2e-88 322
WERAM-Amt-0010 ERN05231 Amborella trichopoda 79 1e-85 313
WERAM-Art-0117 AT5G05610.2 Arabidopsis thaliana 75 4e-82 301
WERAM-Arl-0100 fgenesh2_kg.6__ 497__ AT5G05610.2 Arabidopsis lyrata 75 4e-82 301
WERAM-Brr-0171 Bra034860.1-P Brassica rapa 74 3e-80 295
WERAM-Bro-0102 Bo5g136750.1 Brassica oleracea 73 4e-80 294
WERAM-Orb-0041 OBART03G38930.1 Oryza barthii 75 1e-78 289
WERAM-Lep-0044 LPERR03G33070.1 Leersia perrieri 75 1e-77 286
WERAM-Ors-0037 OS03T0818300-01 Oryza sativa 74 4e-77 284
WERAM-Org-0041 ORGLA03G0356800.1 Oryza glaberrima 74 4e-77 284
WERAM-Orr-0041 ORUFI03G40590.1 Oryza rufipogon 74 5e-77 284
WERAM-Orni-0038 ONIVA03G40570.1 Oryza nivara 74 5e-77 284
WERAM-Orl-0033 KN538803.1_FGP006 Oryza longistaminata 74 5e-77 284
WERAM-Ori-0031 BGIOSGA009559-PA Oryza indica 74 5e-77 284
WERAM-Orgl-0042 OGLUM03G38760.1 Oryza glumaepatula 74 5e-77 284
WERAM-Orm-0050 OMERI05G04360.1 Oryza meridionalis 68 3e-76 281
WERAM-Sei-0039 Si010912m Setaria italica 69 4e-76 281
WERAM-Orbr-0050 OB03G45850.1 Oryza brachyantha 73 2e-75 278
WERAM-Zem-0083 GRMZM2G148810_P01 Zea mays 68 4e-75 278
WERAM-Sob-0119 Sb09g004740.1 Sorghum bicolor 69 5e-75 277
WERAM-Orp-0071 OPUNC07G07630.1 Oryza punctata 66 1e-74 276
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 64 7e-74 273
WERAM-Hov-0103 MLOC_72504.1 Hordeum vulgare 65 3e-72 268
WERAM-Tra-0033 Traes_1DS_59542CFCE.1 Triticum aestivum 65 5e-72 268
WERAM-Brd-0048 BRADI2G34640.1 Brachypodium distachyon 64 1e-71 266
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 63 3e-71 265
WERAM-Aet-0099 EMT23706 Aegilops tauschii 58 4e-67 251
Created Date 25-Jun-2016