WERAM Information

Tag Content
WERAM ID WERAM-Glm-0220
Ensembl Protein ID GLYMA17G05940.1
Gene Name GLYMA_17G051600
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GLYMA17G05940 GLYMA17G05940.1 GLYMA17G05940.1
GLYMA17G05940 GLYMA17G05940.2 GLYMA17G05940.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 7.50e-12 47.1 197 247
Organism Glycine max
Domain Profile
  Me_Reader PHD
          PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                      t+C +Cg++++ ++++++Cd C++wfH+kCvk++  +++  k++ CpsC +
  GLYMA17G05940.1 197 TLCGACGEHYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSN 247
                      78********************************666664479******86 PP
Protein Sequence
(Fasta)		MDGGGVNYNP RTVEQVFRDF KGRRAGMIKA LTTDVEEFFQ QCDPEKDNLC LYGFPNEQWE 60
VNLPAEEVPP ELPEPALGIN FARDGMQDKD WLSLVAVHSD AWLLAVAFYF GARFGFDNAD 120
RKRLFSMIND LPTIFEIVTG SAKKQTKEKS SISNHSSNKS KSGSKGRGSE SGKYSKETKD 180
EEEEVLDEED DEEHEETLCG ACGEHYASDE FWICCDICEK WFHGKCVKIT PARAEHIKQY 240
KCPSCSNKRA RP 252
Nucleotide Sequence
(Fasta)		GCTGCTCACC CATGTTGAAT CATAAATAAA AGGAAGGAAG CACAGCAGAT AGTACTTATA 60
TTAGTACTGT ACGTACTGGT GAATTCAAGG TAACAACACG TCAAGACACA CCATACACGG 120
CCTCTAAATT CCGGATTTGA AAGCGAGAAC CATATAATTA ATTGACCTAT GGAAGGAGAG 180
AGGTTTTGAG GTGTGGGGTC GGTGATGGAC GGTGGTGGAG TGAACTACAA CCCTCGCACC 240
GTGGAACAGG TTTTCCGGGA CTTCAAGGGC CGTAGAGCTG GCATGATCAA GGCTCTCACC 300
ACTGATGTTG AAGAATTTTT CCAGCAGTGC GATCCTGAAA AGGATAATCT TTGTCTGTAC 360
GGATTCCCTA ATGAGCAATG GGAAGTTAAT TTACCTGCGG AAGAAGTTCC TCCGGAGCTT 420
CCTGAGCCTG CATTGGGCAT AAACTTTGCT AGGGATGGGA TGCAAGACAA GGACTGGCTG 480
TCTTTGGTTG CCGTTCACAG CGATGCATGG TTACTTGCAG TGGCTTTCTA CTTTGGGGCA 540
CGATTTGGTT TTGATAATGC TGACAGGAAA CGCCTGTTCT CTATGATTAA TGATTTACCA 600
ACAATATTTG AGATTGTGAC TGGAAGCGCA AAAAAACAGA CGAAGGAAAA ATCATCCATT 660
TCAAACCACA GCAGTAACAA ATCAAAATCT GGTTCAAAAG GGCGAGGATC TGAATCAGGG 720
AAGTATTCAA AGGAAACAAA GGACGAGGAG GAAGAGGTAC TGGATGAAGA AGATGACGAG 780
GAGCATGAGG AGACCTTGTG TGGGGCATGT GGGGAGCACT ATGCATCCGA TGAGTTCTGG 840
ATTTGTTGCG ACATATGTGA GAAGTGGTTC CATGGCAAGT GTGTGAAGAT CACTCCAGCC 900
AGGGCCGAAC ACATCAAGCA GTATAAGTGC CCCTCATGCA GCAATAAGAG AGCACGGCCT 960
TGATATAGTT GAGAAGTGGG TCAGTCCTCA CCCCTTGTAA CTAAATCATG TTGGACGTCT 1020
AACTTGTTAG TGGCTTAGGC TTCCTTTGTC ATGCCATGAT GGTGTGGAAT ATGTATTCAG 1080
TACTTTGGGT CTTGTGAACC TTTCAGTGGA TATATTTATT AATATTGATA GTTTGCAGGT 1140
TCTGAACATG TCTCCAACTA CATCCTTTAC TGTACTTATA TTTTTAGTAC AGTATATGTT 1200
AGCGCACATG TCATATTTGC TAGCATGACA CATTAGATGG ATCAGATCTA TGGTTTACCC 1260
AATGATAGCA GTGTGGCATC TGCGCAAGCT TTGGAAGAAT GACAGAGTTG GCTTTAGGTG 1320
CAAATTACAG TCAAAAGTTT TGTTCAGCAT TTTATGTAAC TAAAATAGTT CTGGGTTCTT 1380
CCCTTAAAGC TCCGCCGGGC CATTGGAAAT ATTATAGGTT GGGCTGAACA GATCTGTTGG 1440
AAATATTGAC GATACATTGT CTGATGCTTC ATACCGTGGC CTGCTGGAAT GTGCTTTATT 1500
GATCTGGCTT CTGAAACTCG GTAGTATTTA CCATTACGGA TCATGGGCAA AGAAACTCAT 1560
CCGAGTTGCT AATTCATCAG TGTGTGAATA TGGTCGTGTG TCGGTGTTCT TTTGGAAGGA 1620
ACCAAAGCCA AATTGTCACA AAGTGGATTG TGAATCTAAC TCAGACTTAC AAAATCGGTT 1680
TATAAGATGA AGATTGTTTC CTATTTATAT AATTTATCTC GACAGTAATA TCTTTAGTCA 1740
ATGTGAGACT TTTAACATGT CCCTTTTTGT TTCAGTTACC TGTCATGTGA GACTTTAAAC 1800
ACACATCCTC TATTTAGGGA TGATCACAAT TAAGATGATT TTTCC 1846
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0077 EOY27191 Theobroma cacao 86 5e-95 344
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 84 4e-93 338
WERAM-Viv-0068 VIT_11s0016g01500.t01 Vitis vinifera 88 6e-92 333
WERAM-Prp-0082 EMJ27202 Prunus persica 82 5e-91 331
WERAM-Amt-0088 ERM99796 Amborella trichopoda 77 2e-88 322
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 76 2e-88 322
WERAM-Brr-0102 Bra020107.1-P Brassica rapa 77 9e-88 320
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 75 5e-87 318
WERAM-Met-0172 KEH18446 Medicago truncatula 78 6e-87 317
WERAM-Mua-0131 GSMUA_Achr8P30680_001 Musa acuminata 75 1e-86 316
WERAM-Sol-0143 Solyc12g096040.1.1 Solanum lycopersicum 78 2e-86 315
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 74 2e-82 302
WERAM-Sei-0086 Si023009m Setaria italica 69 2e-79 292
WERAM-Orbr-0121 OB11G16440.1 Oryza brachyantha 71 3e-79 291
WERAM-Bro-0060 Bo3g127230.1 Brassica oleracea 72 3e-79 291
WERAM-Lep-0110 LPERR11G07220.1 Leersia perrieri 69 7e-79 290
WERAM-Ors-0103 OS11T0244800-01 Oryza sativa 70 9e-79 290
WERAM-Orr-0116 ORUFI11G08380.1 Oryza rufipogon 70 9e-79 290
WERAM-Orni-0115 ONIVA11G08290.1 Oryza nivara 70 9e-79 290
WERAM-Orm-0100 OMERI11G06990.1 Oryza meridionalis 70 9e-79 290
WERAM-Ori-0116 BGIOSGA034217-PA Oryza indica 70 9e-79 290
WERAM-Orgl-0111 OGLUM11G07920.1 Oryza glumaepatula 70 9e-79 290
WERAM-Org-0108 ORGLA11G0071500.1 Oryza glaberrima 70 9e-79 290
WERAM-Orb-0115 OBART11G08090.1 Oryza barthii 70 9e-79 290
WERAM-Php-0137 PP1S97_167V6.1 Physcomitrella patens 69 1e-78 289
WERAM-Sob-0072 Sb04g023220.1 Sorghum bicolor 66 2e-78 289
WERAM-Zem-0014 GRMZM2G016817_P02 Zea mays 68 3e-78 288
WERAM-Orp-0107 OPUNC11G07880.1 Oryza punctata 70 5e-78 287
WERAM-Hov-0063 MLOC_56433.1 Hordeum vulgare 63 3e-77 285
WERAM-Brd-0046 BRADI2G25120.1 Brachypodium distachyon 66 1e-76 283
WERAM-Aet-0106 EMT19247 Aegilops tauschii 66 7e-75 277
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 66 5e-72 268
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 67 2e-71 265
WERAM-Orl-0063 KN539254.1_FGP005 Oryza longistaminata 71 5e-70 261
Created Date 25-Jun-2016