| Tag |
Content |
| WERAM ID |
WERAM-Ict-0088 |
| Ensembl Protein ID |
ENSSTOP00000009419.2 |
| Gene Name |
HDAC11 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
3.30e-16 |
59.7 |
24 |
258 |
|
| Organism |
Ictidomys tridecemlineatus |
| Domain Profile |
HDAC Class-I
class-1.txt 10 dvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkv.epenaeelskelkkfnvgedcPvfdg 97
+++ + ++ hp ++ + +++ + +l + +v++++as e+ll +h+ y++ lk + + + +e++ + + v +
ENSSTOP00000009419.2 24 NITFMGLEKLHPFDAGKWGKVINFLKEENLLSDGMLVEAREASEEDLLVVHTRRYLNELKWSfAVATITEIPPVIFL----PNFLVQRK 108
5555556778899999999999999999999999999*******************999854155666666644433....34445566 PP
class-1.txt 98 lfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlhhGDgveeafyttd 183
+ ++ tG+++ a kL e+ ain GG+hh ++ Gfc Di lai l ++ + id+d h G+g e f +
ENSSTOP00000009419.2 109 VLRPLRIQTGGTIMAG-KLA-VERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFErvdGVSKATIIDLDAHQGNGHERDFMDDK 195
6677799******876.554.45789*****************************999882223567899******************* PP
class-1.txt 184 rvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcG 255
rv + + y+ + +Pg + + + v l+ g +De+y + +++ ++k ++ ++P++v+ + G
ENSSTOP00000009419.2 196 RVYIMDV--YNRHIYPGDRFAK-QAIRR------KVELDWGTEDEEYLHKVERNMEKALQEHSPDVVIYNAG 258
**98766..88889**964333.33333......4899*****************************98876 PP
|
Protein Sequence
(Fasta) | PHSSQLYQHV PETHWPIVYS PRYNITFMGL EKLHPFDAGK WGKVINFLKE ENLLSDGMLV 60
EAREASEEDL LVVHTRRYLN ELKWSFAVAT ITEIPPVIFL PNFLVQRKVL RPLRIQTGGT 120
IMAGKLAVER GWAINVGGGF HHCSSDRGGG FCAYADITLA IKFLFERVDG VSKATIIDLD 180
AHQGNGHERD FMDDKRVYIM DVYNRHIYPG DRFAKQAIRR KVELDWGTED EEYLHKVERN 240
MEKALQEHSP DVVIYNAG 258Protein Fasta Sequence
>ENSSTOP00000009419.2|Class-I|Ictidomys tridecemlineatus
PHSSQLYQHVPETHWPIVYSPRYNITFMGLEKLHPFDAGKWGKVINFLKEENLLSDGMLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRIQTGGTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVDGVSKATIIDLDAHQGNGHERDFMDDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELDWGTEDEEYLHKVERNMEKALQEHSPDVVIYNAG |
Nucleotide Sequence
(Fasta) | CCACACTCCA GCCAGCTCTA CCAGCATGTG CCAGAGACAC ACTGGCCCAT TGTGTACTCC 60
CCGCGCTACA ACATCACCTT CATGGGCCTG GAGAAGCTGC ACCCTTTCGA TGCCGGGAAA 120
TGGGGCAAGG TGATCAATTT CCTAAAAGAG GAAAACCTGC TGTCAGACGG CATGCTGGTG 180
GAGGCCCGGG AGGCCTCGGA GGAGGACCTG CTGGTGGTGC ACACGAGGCG CTACCTCAAC 240
GAGCTCAAGT GGTCCTTCGC GGTCGCCACC ATCACAGAGA TCCCCCCTGT CATCTTCCTC 300
CCCAACTTCC TTGTGCAGAG GAAGGTGCTG CGGCCCCTTC GGATCCAGAC AGGAGGAACC 360
ATCATGGCGG GAAAGCTGGC GGTGGAGCGA GGCTGGGCCA TCAACGTAGG GGGCGGCTTC 420
CACCACTGCT CTAGCGACCG GGGCGGGGGT TTCTGTGCCT ACGCGGACAT CACACTGGCC 480
ATCAAGTTCC TCTTTGAGCG AGTGGACGGC GTCTCCAAGG CCACCATCAT CGACCTCGAT 540
GCCCATCAGG GCAACGGGCA CGAGCGGGAC TTCATGGACG ACAAGCGTGT GTATATCATG 600
GACGTCTACA ACCGCCACAT CTACCCCGGG GACCGCTTTG CCAAGCAGGC CATCAGGCGC 660
AAGGTGGAGC TGGACTGGGG CACGGAGGAC GAGGAGTACC TGCACAAGGT GGAGAGGAAC 720
ATGGAGAAGG CCCTGCAGGA GCACAGCCCG GACGTGGTGA TCTACAACGC TGGC
775Nucleotide Fasta Sequence
>ENSSTOP00000009419.2|Class-I|Ictidomys tridecemlineatus
CCACACTCCAGCCAGCTCTACCAGCATGTGCCAGAGACACACTGGCCCATTGTGTACTCCCCGCGCTACAACATCACCTTCATGGGCCTGGAGAAGCTGCACCCTTTCGATGCCGGGAAATGGGGCAAGGTGATCAATTTCCTAAAAGAGGAAAACCTGCTGTCAGACGGCATGCTGGTGGAGGCCCGGGAGGCCTCGGAGGAGGACCTGCTGGTGGTGCACACGAGGCGCTACCTCAACGAGCTCAAGTGGTCCTTCGCGGTCGCCACCATCACAGAGATCCCCCCTGTCATCTTCCTCCCCAACTTCCTTGTGCAGAGGAAGGTGCTGCGGCCCCTTCGGATCCAGACAGGAGGAACCATCATGGCGGGAAAGCTGGCGGTGGAGCGAGGCTGGGCCATCAACGTAGGGGGCGGCTTCCACCACTGCTCTAGCGACCGGGGCGGGGGTTTCTGTGCCTACGCGGACATCACACTGGCCATCAAGTTCCTCTTTGAGCGAGTGGACGGCGTCTCCAAGGCCACCATCATCGACCTCGATGCCCATCAGGGCAACGGGCACGAGCGGGACTTCATGGACGACAAGCGTGTGTATATCATGGACGTCTACAACCGCCACATCTACCCCGGGGACCGCTTTGCCAAGCAGGCCATCAGGCGCAAGGTGGAGCTGGACTGGGGCACGGAGGACGAGGAGTACCTGCACAAGGTGGAGAGGAACATGGAGAAGGCCCTGCAGGAGCACAGCCCGGACGTGGTGATCTACAACGCTGGC
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
