| Tag |
Content |
| WERAM ID |
WERAM-Loa-0005 |
| Ensembl Protein ID |
ENSLAFP00000000421.3 |
| Gene Name |
HDAC11 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-IV |
1.80e-167 |
556.4 |
30 |
316 |
| HDAC |
Class-I |
1.50e-26 |
94 |
30 |
309 |
|
| Organism |
Loxodonta africana |
| Domain Profile |
HDAC Class-IV
class-4.txt 1 leklhpfdaskwkkvikflkeeklledealveareaskedllvvhtrkylkslksslkvatiteiplvaflpnflvqrkvlrplrlqag 89
le+lhpfda+kw+kvi+flkeekll+d+ lveareas+edllvvhtr+yl++lk+s++vatiteip+v+flpnflvqrkvlrplr+q+g
ENSLAFP00000000421.3 30 LERLHPFDAGKWGKVINFLKEEKLLSDSLLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTG 118
79*************************************************************************************** PP
class-4.txt 90 GtilaaklaverGwainvGGGfhhcsserGGGfcayaditlaikflferlkaisrviiidldahqGnGherdfaddkrvyildvynrei 178
Gti+a+kla+erGwainvGGGfhhcss+rGGGfcayaditlaikflfer+++isr++iidldahqGnGherdf++dkrvyi+dvynr+i
ENSLAFP00000000421.3 119 GTIMAGKLAMERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYNRHI 207
***************************************************************************************** PP
class-4.txt 179 ypkdrvakeairrkvelesgtedeeylekleralkkslqefepdlvvynaGtdvleGdrlGalkispegivkrdevvfrlvrakdipiv 267
yp+dr+ak+airrkvele+gted+eyl+k+ r++kk+lqe++pd+vvynaGtdvleGdrlG+l+ispegivkrde+vfr+vr +++pi+
ENSLAFP00000000421.3 208 YPGDRFAKQAIRRKVELEWGTEDDEYLDKVGRNIKKALQEHRPDVVVYNAGTDVLEGDRLGGLSISPEGIVKRDELVFRVVRGHQVPIL 296
***************************************************************************************** PP
class-4.txt 268 mvtsGGyqkrsarviadsil 287
mvtsGGyqkr+ar+iadsil
ENSLAFP00000000421.3 297 MVTSGGYQKRTARIIADSIL 316
******************95 PP
HDAC Class-I
class-1.txt 16 ygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflk.kvepenaeelskelkkfnvgedcPvfdglfeycq 103
+ hp ++ + +++ + +l + +v++++as e+ll +h+ y++ lk + + + +e++ + + v ++ +
ENSLAFP00000000421.3 30 LERLHPFDAGKWGKVINFLKEEKLLSDSLLVEAREASEEDLLVVHTRRYLNELKwSFAVATITEIPPVIFLP----NFLVQRKVLRPLR 114
556677777888888888888888888889999999999999999999999997234555666666444333....3344555666668 PP
class-1.txt 104 litGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlhhGDgveeafyttdrvmtvs 189
+ tG+++ a kL e+ ain GG+hh ++ Gfc Di lai l +r + id+d h G+g e f +rv +
ENSLAFP00000000421.3 115 TQTGGTIMAG-KLA-MERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFErveGISRATIIDLDAHQGNGHERDFMGDKRVYIMD 201
99****9865.555.46789*****************************99987222467999**********************9876 PP
class-1.txt 190 fhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae.. 276
+ y+ + +Pg + + + v l+ g +D++y + + i+k ++ ++P++vv + G+D l gDrlg ++s +g+ +
ENSLAFP00000000421.3 202 V--YNRHIYPGDRFAK-QAIRR------KVELEWGTEDDEYLDKVGRNIKKALQEHRPDVVVYNAGTDVLEGDRLGGLSISPEGIVKrd 281
6..88889**964333.33333......4899****9999999999999***********************************98766 PP
class-1.txt 277 ..cvkfvksfnlpllvlGGGGYtlrnvaR 303
+ ++v+ +++p+l++ GGY++r aR
ENSLAFP00000000421.3 282 elVFRVVRGHQVPILMVTSGGYQKRT-AR 309
667899****************9874.45 PP
|
Protein Sequence
(Fasta) | PHTTQLYQAV PETRWPIVYS PRYNITFMGL ERLHPFDAGK WGKVINFLKE EKLLSDSLLV 60
EAREASEEDL LVVHTRRYLN ELKWSFAVAT ITEIPPVIFL PNFLVQRKVL RPLRTQTGGT 120
IMAGKLAMER GWAINVGGGF HHCSSDRGGG FCAYADITLA IKFLFERVEG ISRATIIDLD 180
AHQGNGHERD FMGDKRVYIM DVYNRHIYPG DRFAKQAIRR KVELEWGTED DEYLDKVGRN 240
IKKALQEHRP DVVVYNAGTD VLEGDRLGGL SISPEGIVKR DELVFRVVRG HQVPILMVTS 300
GGYQKRTARI IADSILNLHG LGLIGPKSRS VSAQSSDTPL LPMAVP 346Protein Fasta Sequence
>ENSLAFP00000000421.3|Class-I|Loxodonta africana
PHTTQLYQAVPETRWPIVYSPRYNITFMGLERLHPFDAGKWGKVINFLKEEKLLSDSLLVEAREASEEDLLVVHTRRYLNELKWSFAVATITEIPPVIFLPNFLVQRKVLRPLRTQTGGTIMAGKLAMERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYNRHIYPGDRFAKQAIRRKVELEWGTEDDEYLDKVGRNIKKALQEHRPDVVVYNAGTDVLEGDRLGGLSISPEGIVKRDELVFRVVRGHQVPILMVTSGGYQKRTARIIADSILNLHGLGLIGPKSRSVSAQSSDTPLLPMAVP |
Nucleotide Sequence
(Fasta) | CCACACACAA CCCAGCTGTA CCAGGCTGTG CCGGAGACGC GCTGGCCCAT CGTATACTCT 60
CCGCGCTACA ACATCACCTT CATGGGCCTG GAGAGGCTGC ACCCCTTCGA CGCGGGGAAA 120
TGGGGCAAAG TGATCAATTT CCTCAAAGAG GAGAAACTTC TGTCGGATAG CCTGCTGGTG 180
GAGGCACGGG AGGCCTCGGA GGAGGACCTG CTGGTGGTGC ACACGAGGCG CTATCTCAAT 240
GAGCTGAAGT GGTCCTTTGC TGTCGCGACC ATCACAGAAA TCCCCCCTGT CATCTTCCTC 300
CCCAACTTCC TTGTGCAGAG AAAGGTGCTG AGGCCCCTTC GGACCCAGAC AGGAGGAACC 360
ATCATGGCAG GGAAGCTGGC CATGGAGCGG GGCTGGGCCA TCAATGTGGG GGGCGGCTTC 420
CACCACTGCT CCAGTGACCG GGGCGGGGGC TTCTGTGCCT ATGCGGACAT CACACTTGCC 480
ATCAAGTTTC TATTTGAACG TGTGGAGGGC ATCTCCAGAG CCACCATCAT TGATCTCGAT 540
GCCCACCAGG GCAATGGGCA TGAGCGGGAC TTCATGGGGG ACAAGCGTGT GTACATCATG 600
GACGTCTACA ACCGCCACAT TTACCCCGGG GACCGCTTTG CCAAGCAGGC TATCAGGCGA 660
AAGGTGGAGC TGGAGTGGGG CACGGAGGAT GATGAGTACC TGGATAAGGT GGGGAGGAAC 720
ATCAAGAAGG CCCTCCAGGA GCATCGGCCG GACGTGGTCG TGTACAACGC AGGCACCGAT 780
GTCCTTGAGG GGGACCGCCT TGGGGGGCTG TCCATCAGCC CAGAGGGCAT TGTGAAGCGG 840
GATGAGCTCG TGTTCCGAGT GGTCCGTGGC CACCAGGTGC CCATCCTCAT GGTGACGTCG 900
GGCGGGTACC AGAAGCGCAC GGCCCGCATC ATAGCTGACT CGATTCTCAA TCTGCATGGC 960
CTGGGGCTCA TTGGGCCCAA GTCCCGCAGC GTCTCTGCAC AGAGCTCGGA CACACCTCTG 1020
CTGCCCATGG CAGTGCCCTG A
1042Nucleotide Fasta Sequence
>ENSLAFP00000000421.3|Class-I|Loxodonta africana
CCACACACAACCCAGCTGTACCAGGCTGTGCCGGAGACGCGCTGGCCCATCGTATACTCTCCGCGCTACAACATCACCTTCATGGGCCTGGAGAGGCTGCACCCCTTCGACGCGGGGAAATGGGGCAAAGTGATCAATTTCCTCAAAGAGGAGAAACTTCTGTCGGATAGCCTGCTGGTGGAGGCACGGGAGGCCTCGGAGGAGGACCTGCTGGTGGTGCACACGAGGCGCTATCTCAATGAGCTGAAGTGGTCCTTTGCTGTCGCGACCATCACAGAAATCCCCCCTGTCATCTTCCTCCCCAACTTCCTTGTGCAGAGAAAGGTGCTGAGGCCCCTTCGGACCCAGACAGGAGGAACCATCATGGCAGGGAAGCTGGCCATGGAGCGGGGCTGGGCCATCAATGTGGGGGGCGGCTTCCACCACTGCTCCAGTGACCGGGGCGGGGGCTTCTGTGCCTATGCGGACATCACACTTGCCATCAAGTTTCTATTTGAACGTGTGGAGGGCATCTCCAGAGCCACCATCATTGATCTCGATGCCCACCAGGGCAATGGGCATGAGCGGGACTTCATGGGGGACAAGCGTGTGTACATCATGGACGTCTACAACCGCCACATTTACCCCGGGGACCGCTTTGCCAAGCAGGCTATCAGGCGAAAGGTGGAGCTGGAGTGGGGCACGGAGGATGATGAGTACCTGGATAAGGTGGGGAGGAACATCAAGAAGGCCCTCCAGGAGCATCGGCCGGACGTGGTCGTGTACAACGCAGGCACCGATGTCCTTGAGGGGGACCGCCTTGGGGGGCTGTCCATCAGCCCAGAGGGCATTGTGAAGCGGGATGAGCTCGTGTTCCGAGTGGTCCGTGGCCACCAGGTGCCCATCCTCATGGTGACGTCGGGCGGGTACCAGAAGCGCACGGCCCGCATCATAGCTGACTCGATTCTCAATCTGCATGGCCTGGGGCTCATTGGGCCCAAGTCCCGCAGCGTCTCTGCACAGAGCTCGGACACACCTCTGCTGCCCATGGCAGTGCCCTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
