WERAM Information


Tag Content
WERAM ID WERAM-Cap-0083
Ensembl Protein ID ENSCPOP00000005971.2
Gene Name HDAC11
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCPOG00000006628.3 ENSCPOT00000006694.2 ENSCPOP00000005971.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-IV 6.10e-168 557.5 31 317
HDAC Class-I 9.70e-26 91 32 310
Organism Cavia porcellus
Domain Profile
  HDAC Class-IV

           class-4.txt   1 leklhpfdaskwkkvikflkeeklledealveareaskedllvvhtrkylkslksslkvatiteiplvaflpnflvqrkvlrplrlqag 89 
leklhpfda+kw+kvi flkeekll+d++lveareas++dllvvhtr+yl++lk+s++vatiteip+v+flpnflvqrkvlrplr+q+g
ENSCPOP00000005971.2 31 LEKLHPFDAGKWGKVISFLKEEKLLSDGMLVEAREASDDDLLVVHTRRYLNELKWSFVVATITEIPPVIFLPNFLVQRKVLRPLRTQTG 119
79*************************************************************************************** PP
class-4.txt 90 GtilaaklaverGwainvGGGfhhcsserGGGfcayaditlaikflferlkaisrviiidldahqGnGherdfaddkrvyildvynrei 178
Gti+a+klaverGwainvGGGfhhcss+rGGGfcayaditlaikflfer+++isr++iidldahqGnGherdf++dkrvyi+dvynr+i
ENSCPOP00000005971.2 120 GTIMAGKLAVERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERMEGISRATIIDLDAHQGNGHERDFMGDKRVYIMDVYNRHI 208
***************************************************************************************** PP
class-4.txt 179 ypkdrvakeairrkvelesgtedeeylekleralkkslqefepdlvvynaGtdvleGdrlGalkispegivkrdevvfrlvrakdipiv 267
yp+dr+ak+airrkvele+gtedeeyl+k+er+++++lqe+ pd+vvynaGtd+leGdrlG+l+isp givkrdevvfrlvra++ipi+
ENSCPOP00000005971.2 209 YPGDRFAKQAIRRKVELEWGTEDEEYLSKVERNVERALQEHLPDVVVYNAGTDILEGDRLGGLSISPGGIVKRDEVVFRLVRAHQIPIL 297
***************************************************************************************** PP
class-4.txt 268 mvtsGGyqkrsarviadsil 287
mvtsGGyqkr+ar+iadsil
ENSCPOP00000005971.2 298 MVTSGGYQKRTARIIADSIL 317
******************95 PP

  HDAC Class-I

           class-1.txt  17 gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkve.penaeelskelkkfnvgedcPvfdglfeycql 104
++ hp ++ + +++ + +l + +v++++as ++ll +h+ y++ lk + + + +e++ + + v ++ ++
ENSCPOP00000005971.2 32 EKLHPFDAGKWGKVISFLKEEKLLSDGMLVEAREASDDDLLVVHTRRYLNELKWSFvVATITEIPPVIFL----PNFLVQRKVLRPLRT 116
5667777777777777777777777777888888888888888888888888754404444454433332....333444555666688 PP
class-1.txt 105 itGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk...khkrvlyididlhhGDgveeafyttdrvmtvsf 190
tG+++ a kL e+ ain GG+hh ++ Gfc Di lai l +r + id+d h G+g e f +rv + +
ENSCPOP00000005971.2 117 QTGGTIMAG-KLA-VERGWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFErmeGISRATIIDLDAHQGNGHERDFMGDKRVYIMDV 203
99***9876.554.45778*****************************99977222457899**********************98766 PP
class-1.txt 191 hkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae... 276
y+ + +Pg + + + v l+ g +De+y + +++ +++ ++ + P++vv + G+D l gDrlg ++s g+ +
ENSCPOP00000005971.2 204 --YNRHIYPGDRFAK-QAIRR------KVELEWGTEDEEYLSKVERNVERALQEHLPDVVVYNAGTDILEGDRLGGLSISPGGIVKrde 283
..88889**964333.33333......489**************************************************999876565 PP
class-1.txt 277 .cvkfvksfnlpllvlGGGGYtlrnvaR 303
+ ++v+ +++p+l++ GGY++r aR
ENSCPOP00000005971.2 284 vVFRLVRAHQIPILMVTSGGYQKRT-AR 310
56799****************9874.45 PP

Protein Sequence
(Fasta)
RPHATQLYQH VPETRWPIVY SPRYNITFMG LEKLHPFDAG KWGKVISFLK EEKLLSDGML 60
VEAREASDDD LLVVHTRRYL NELKWSFVVA TITEIPPVIF LPNFLVQRKV LRPLRTQTGG 120
TIMAGKLAVE RGWAINVGGG FHHCSSDRGG GFCAYADITL AIKFLFERME GISRATIIDL 180
DAHQGNGHER DFMGDKRVYI MDVYNRHIYP GDRFAKQAIR RKVELEWGTE DEEYLSKVER 240
NVERALQEHL PDVVVYNAGT DILEGDRLGG LSISPGGIVK RDEVVFRLVR AHQIPILMVT 300
SGGYQKRTAR IIADSILNLH DLGLIGLESP SLSAQSSDTP LLPPAVP 347
Nucleotide Sequence
(Fasta)
AGGCCACACG CCACCCAGCT GTACCAGCAT GTGCCAGAAA CTCGTTGGCC CATCGTGTAT 60
TCACCCCGCT ACAATATCAC CTTCATGGGC CTGGAGAAGC TGCACCCCTT CGACGCTGGC 120
AAATGGGGCA AGGTGATCAG TTTCCTAAAA GAAGAGAAGC TGCTGTCAGA TGGCATGTTG 180
GTGGAGGCGC GGGAGGCCTC GGATGACGAC CTGCTGGTAG TGCACACCAG GCGGTATCTC 240
AATGAACTGA AGTGGTCCTT CGTCGTCGCC ACCATCACAG AAATACCCCC TGTCATCTTC 300
CTCCCCAACT TCCTGGTGCA GAGGAAGGTG CTGCGGCCCC TCCGGACCCA GACTGGAGGA 360
ACCATTATGG CAGGGAAGCT GGCTGTGGAA CGAGGCTGGG CCATCAATGT GGGGGGTGGC 420
TTCCACCACT GCTCCAGTGA CCGGGGCGGG GGCTTCTGTG CCTATGCTGA CATCACGCTG 480
GCCATCAAGT TCCTGTTCGA GCGAATGGAA GGCATCTCAA GGGCCACCAT CATTGATCTT 540
GACGCCCATC AGGGCAATGG GCACGAGAGA GACTTCATGG GTGACAAACG CGTGTACATC 600
ATGGATGTCT ACAACCGCCA CATCTACCCT GGGGACCGCT TTGCCAAGCA AGCCATCAGG 660
CGGAAGGTGG AGCTGGAGTG GGGCACAGAG GATGAGGAGT ACCTGAGCAA AGTGGAGAGG 720
AACGTGGAGA GAGCCCTCCA GGAGCACCTA CCTGACGTGG TGGTGTACAA CGCCGGCACC 780
GACATCCTGG AGGGGGACCG CCTCGGGGGA CTGTCAATCA GCCCTGGGGG CATTGTGAAG 840
CGGGATGAGG TGGTATTCCG CTTGGTCCGG GCTCACCAGA TCCCCATCCT CATGGTGACC 900
TCAGGCGGGT ACCAGAAGCG CACAGCCCGC ATCATTGCAG ACTCCATCCT CAATTTGCAT 960
GACCTGGGGC TCATCGGCCT AGAGTCACCC AGCCTGTCGG CACAGAGCTC AGACACGCCT 1020
CTGCTCCCAC CTGCGGTTCC CTGA 1045
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Aim-0104 ENSAMEP00000010054.1 Ailuropoda melanoleuca 93 0.0 672
WERAM-Mum-0132 ENSMUSP00000043828.4 Mus musculus 94 0.0 669
WERAM-Mup-0199 ENSMPUP00000017162.1 Mustela putorius furo 92 0.0 669
WERAM-Ptv-0049 ENSPVAP00000005253.1 Pteropus vampyrus 92 0.0 667
WERAM-Mam-0008 ENSMMUP00000001824.2 Macaca mulatta 93 0.0 666
WERAM-Chs-0115 ENSCSAP00000005710.1 Chlorocebus sabaeus 93 0.0 665
WERAM-Dio-0089 ENSDORP00000009107.1 Dipodomys ordii 92 0.0 665
WERAM-Hos-0174 ENSP00000295757.3 Homo sapiens 92 0.0 664
WERAM-Ran-0042 ENSRNOP00000008962.5 Rattus norvegicus 93 0.0 664
WERAM-Paa-0195 ENSPANP00000003035.1 Papio anubis 92 0.0 663
WERAM-Orc-0095 ENSOCUP00000008476.2 Oryctolagus cuniculus 91 0.0 662
WERAM-Ocp-0102 ENSOPRP00000009462.1 Ochotona princeps 91 0.0 662
WERAM-Poa-0118 ENSPPYP00000014982.2 Pongo abelii 92 0.0 662
WERAM-Gog-0090 ENSGGOP00000007570.2 Gorilla gorilla 92 0.0 660
WERAM-Eqc-0015 ENSECAP00000002522.1 Equus caballus 91 0.0 660
WERAM-Loa-0005 ENSLAFP00000000421.3 Loxodonta africana 91 0.0 657
WERAM-Myl-0189 ENSMLUP00000015766.2 Myotis lucifugus 92 0.0 655
WERAM-Tut-0131 ENSTTRP00000010611.1 Tursiops truncatus 90 0.0 654
WERAM-Otg-0083 ENSOGAP00000006490.2 Otolemur garnettii 91 0.0 648
WERAM-Bot-0074 ENSBTAP00000009482.5 Bos taurus 90 0.0 642
WERAM-Sus-0082 ENSSSCP00000012372.2 Sus scrofa 87 2e-178 622
WERAM-Caf-0054 ENSCAFP00000006551.3 Canis familiaris 93 2e-176 615
WERAM-Nol-0049 ENSNLEP00000005908.2 Nomascus leucogenys 92 3e-175 611
WERAM-Fec-0086 ENSFCAP00000006953.3 Felis catus 93 3e-175 611
WERAM-Mim-0127 ENSMICP00000012962.1 Microcebus murinus 83 5e-166 580
WERAM-Pes-0146 ENSPSIP00000017189.1 Pelodiscus sinensis 79 1e-164 576
WERAM-Meg-0057 ENSMGAP00000005254.2 Meleagris gallopavo 81 1e-163 573
WERAM-Gaga-0055 ENSGALP00000008151.4 Gallus gallus 81 3e-163 571
WERAM-Anp-0099 ENSAPLP00000011801.1 Anas platyrhynchos 82 4e-162 568
WERAM-Mae-0056 ENSMEUP00000005580.1 Macropus eugenii 81 1e-159 559
WERAM-Leo-0143 ENSLOCP00000017300.1 Lepisosteus oculatus 77 3e-159 558
WERAM-Sah-0048 ENSSHAP00000005466.1 Sarcophilus harrisii 81 2e-158 555
WERAM-Anc-0120 ENSACAP00000011278.3 Anolis carolinensis 81 2e-157 552
WERAM-Ova-0011 ENSOARP00000001712.1 Ovis aries 78 3e-156 548
WERAM-Tag-0056 ENSTGUP00000003927.1 Taeniopygia guttata 80 7e-155 543
WERAM-Gaa-0111 ENSGACP00000014764.1 Gasterosteus aculeatus 76 9e-153 536
WERAM-Orla-0136 ENSORLP00000016174.1 Oryzias latipes 80 1e-152 536
WERAM-Pof-0112 ENSPFOP00000009813.1 Poecilia formosa 78 3e-152 535
WERAM-Xim-0081 ENSXMAP00000007517.1 Xiphophorus maculatus 78 4e-151 531
WERAM-Lac-0082 ENSLACP00000010626.1 Latimeria chalumnae 74 1e-146 516
WERAM-Orn-0036 ENSONIP00000004088.1 Oreochromis niloticus 82 2e-145 512
WERAM-Dar-0190 ENSDARP00000109681.2 Danio rerio 71 2e-145 512
WERAM-Ict-0088 ENSSTOP00000009419.2 Ictidomys tridecemlineatus 92 4e-144 508
WERAM-Prc-0001 ENSPCAP00000000121.1 Procavia capensis 74 6e-142 501
WERAM-Dan-0117 ENSDNOP00000014714.2 Dasypus novemcinctus 88 1e-137 486
WERAM-Mod-0065 ENSMODP00000010728.2 Monodelphis domestica 71 2e-136 483
WERAM-Fia-0001 ENSFALP00000000041.1 Ficedula albicollis 81 3e-133 472
WERAM-Pem-0019 ENSPMAP00000002586.1 Petromyzon marinus 67 2e-131 466
WERAM-Gam-0017 ENSGMOP00000001513.1 Gadus morhua 68 5e-128 454
WERAM-Pat-0124 ENSPTRP00000025262.3 Pan troglodytes 91 6e-119 424
WERAM-Asm-0175 ENSAMXP00000017267.1 Astyanax mexicanus 80 5e-118 421
WERAM-Cis-0041 ENSCSAVP00000009072.1 Ciona savignyi 59 6e-116 414
WERAM-Thc-0103 EOY29884 Theobroma cacao 59 1e-112 404
WERAM-Bro-0132 Bo7g095520.1 Brassica oleracea 59 1e-112 403
WERAM-Orgl-0063 OGLUM06G20210.1 Oryza glumaepatula 58 1e-112 403
WERAM-Brr-0052 Bra009877.1-P Brassica rapa 59 3e-112 402
WERAM-Sei-0028 Si006784m Setaria italica 58 5e-112 401
WERAM-Ors-0058 OS06T0571100-01 Oryza sativa 58 8e-112 400
WERAM-Orni-0064 ONIVA06G22840.1 Oryza nivara 58 8e-112 400
WERAM-Ori-0066 BGIOSGA021002-PA Oryza indica 58 8e-112 400
WERAM-Org-0062 ORGLA06G0157900.1 Oryza glaberrima 58 8e-112 400
WERAM-Orb-0065 OBART06G18360.1 Oryza barthii 58 8e-112 400
WERAM-Sob-0134 Sb10g022550.1 Sorghum bicolor 57 8e-112 400
WERAM-Orr-0066 ORUFI06G20130.1 Oryza rufipogon 58 2e-111 399
WERAM-Zem-0011 GRMZM2G008425_P01 Zea mays 57 2e-111 399
WERAM-Brd-0021 BRADI1G37510.1 Brachypodium distachyon 58 3e-111 399
WERAM-Met-0014 AES59273 Medicago truncatula 60 2e-109 392
WERAM-Php-0113 PP1S53_217V6.1 Physcomitrella patens 57 5e-109 391
WERAM-Arl-0095 fgenesh2_kg.6__ 2585__ AT5G26040.2 Arabidopsis lyrata 59 1e-108 390
WERAM-Sol-0102 Solyc08g065350.2.1 Solanum lycopersicum 57 2e-108 389
WERAM-Art-0129 AT5G26040.2 Arabidopsis thaliana 59 2e-108 389
WERAM-Viv-0015 VIT_04s0008g00910.t01 Vitis vinifera 59 2e-107 386
WERAM-Tra-0321 Traes_7DL_86EEFA04E.2 Triticum aestivum 56 2e-107 386
WERAM-Glm-0229 GLYMA17G34770.1 Glycine max 58 1e-106 383
WERAM-Pot-0080 POPTR_0006s24640.1 Populus trichocarpa 57 3e-106 382
WERAM-Mua-0015 GSMUA_Achr10P28050_001 Musa acuminata 57 2e-104 376
WERAM-Sem-0048 EFJ15307 Selaginella moellendorffii 55 9e-104 374
WERAM-Chh-0019 ENSCHOP00000001858.1 Choloepus hoffmanni 58 7e-102 367
WERAM-Orbr-0073 OB06G26590.1 Oryza brachyantha 55 1e-101 367
WERAM-Cii-0063 ENSCINP00000027979.2 Ciona intestinalis 60 1e-101 366
WERAM-Tru-0023 TRIUR3_12206-P1 Triticum urartu 59 9e-99 357
WERAM-Orm-0062 OMERI06G19350.1 Oryza meridionalis 53 9e-98 353
WERAM-Aet-0055 EMT26973 Aegilops tauschii 50 2e-95 346
WERAM-Lep-0065 LPERR06G15640.1 Leersia perrieri 54 4e-93 338
WERAM-Ect-0025 ENSETEP00000001831.1 Echinops telfairi 61 1e-92 337
WERAM-Drm-0083 FBpp0084109 Drosophila melanogaster 53 4e-90 328
WERAM-Prp-0064 EMJ26901 Prunus persica 58 2e-88 323
WERAM-Cae-0036 C35A5.9 Caenorhabditis elegans 49 8e-85 311
WERAM-Hov-0085 MLOC_6441.1 Hordeum vulgare 55 2e-79 293
WERAM-Orp-0063 OPUNC06G17220.1 Oryza punctata 57 8e-79 291
WERAM-Sot-0090 PGSC0003DMT400076986 Solanum tuberosum 62 5e-78 288
WERAM-Tub-0108 ENSTBEP00000012162.1 Tupaia belangeri 84 4e-77 285
WERAM-Caj-0177 ENSCJAP00000031023.1 Callithrix jacchus 89 2e-76 283
WERAM-Chr-0007 EDP00102 Chlamydomonas reinhardtii 48 7e-73 271
WERAM-Ora-0107 ENSOANP00000020314.1 Ornithorhynchus anatinus 72 5e-63 238
WERAM-Orl-0079 KN539689.1_FGP004 Oryza longistaminata 44 5e-41 165
WERAM-Tar-0078 ENSTRUP00000015330.1 Takifugu rubripes 33 1e-35 148
WERAM-Cym-0025 CMQ158CT Cyanidioschyzon merolae 32 1e-28 124
WERAM-Osl-0038 ABO99879 Ostreococcus lucimarinus 31 1e-27 121
WERAM-Amt-0062 ERN16364 Amborella trichopoda 51 3e-27 120
WERAM-Kop-0012 CAY68916 Komagataella pastoris 25 1e-21 101
WERAM-Asg-0010 AAS51704 Ashbya gossypii 26 1e-18 91.7
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 28 3e-18 90.1
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 25 4e-18 89.4
WERAM-Pug-0033 EFP89819 Puccinia graminis 30 7e-18 89.0
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 25 1e-17 87.8
WERAM-Sac-0016 YGL194C Saccharomyces cerevisiae 28 1e-17 87.8
WERAM-Mel-0007 EGF99116 Melampsora laricipopulina 31 3e-17 87.0
WERAM-Miv-0013 MVLG_01994T0 Microbotryum violaceum 30 4e-17 86.3
WERAM-Kll-0026 CAG98203 Kluyveromyces lactis 28 4e-17 86.3
WERAM-Cag-0001 CAG57805 Candida glabrata 26 7e-17 85.5
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 29 1e-16 84.7
WERAM-Scs-0017 EDO01763 Sclerotinia sclerotiorum 26 2e-16 84.0
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 24 3e-16 83.2
WERAM-Usm-0012 UM02102P0 Ustilago maydis 24 4e-16 82.8
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 27 8e-16 82.0
WERAM-Caa-0018 KGT69072 Candida albicans 31 9e-16 81.6
WERAM-Pytr-0031 EDU43366 Pyrenophora triticirepentis 29 1e-15 81.6
Created Date 25-Jun-2016