| Tag |
Content |
| WERAM ID |
WERAM-Php-0113 |
| Ensembl Protein ID |
PP1S53_217V6.1 |
| Gene Name |
HDA1503 PHYPADRAFT_125141 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
3.00e-32 |
113.4 |
35 |
323 |
|
| Organism |
Physcomitrella patens |
| Domain Profile |
HDAC Class-I
class-1.txt 3 vayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPv.fd 96
v+y + +v+ + +++ hp +++s +++++ + g+ k+ +iv+p +a++++ll +h+e+y++ l+++ + + + e++ + + v +
PP1S53_217V6.1 35 VVYSSSYNVSFLGIEKLHPFDASKWSHVQNFLSDDGVLKQKRIVEPVEATRDDLLVVHTEKYLDSLNSSYVVAQIT---EVAPVAFLPNFLVqWK 126
6788888899999999**************************************************9987655433...3333333444444045 PP
class-1.txt 97 glfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgveeafyttdrvmtvs 189
l+ + + + G+++ +a kL ke+ ain GG+hh +e Gfc Di lai+ +rv+ id+d h G+g e f++ drv +
PP1S53_217V6.1 127 LLHPFRKQV-GGTVLSA-KLA-KERGWAINIGGGFHHCCANEGGGFCAYADITLAIQFAYTrlAISRVIIIDLDAHQGNGHERDFTNDDRVYIID 218
566666655.5555444.565.56789*****************************9654325899**************************987 PP
class-1.txt 190 fhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghae....cvkf 280
+ y+e+ +P d +a k v lk g + ++y +++++ ++k +f+Pe vv + G+D l gD+lg +s +g + + +f
PP1S53_217V6.1 219 M--YNEDIYPQ-----DFKARKR--INQAVALKSGTKTDRYLALLSQELKKAATIFKPELVVYNAGTDVLEGDPLGRLLVSPEGVKQrdemVFRF 304
5..89988884.....4444444..445689***************************************************9987644457789 PP
class-1.txt 281 vksfnlpllvlGGGGYtlr 299
k+ + p+++l GGY ++
PP1S53_217V6.1 305 AKDQKSPIIMLTSGGYMKT 323
9999************764 PP
|
Protein Sequence
(Fasta) | MAASSTLQED QVKQKQRIEA SKLYINVSPD EKDPVVYSSS YNVSFLGIEK LHPFDASKWS 60
HVQNFLSDDG VLKQKRIVEP VEATRDDLLV VHTEKYLDSL NSSYVVAQIT EVAPVAFLPN 120
FLVQWKLLHP FRKQVGGTVL SAKLAKERGW AINIGGGFHH CCANEGGGFC AYADITLAIQ 180
FAYTRLAISR VIIIDLDAHQ GNGHERDFTN DDRVYIIDMY NEDIYPQDFK ARKRINQAVA 240
LKSGTKTDRY LALLSQELKK AATIFKPELV VYNAGTDVLE GDPLGRLLVS PEGVKQRDEM 300
VFRFAKDQKS PIIMLTSGGY MKTSARVIAD SIKNLAAKRL ISLPSGSSGS SS 352Protein Fasta Sequence
>PP1S53_217V6.1|Class-I|Physcomitrella patens
MAASSTLQEDQVKQKQRIEASKLYINVSPDEKDPVVYSSSYNVSFLGIEKLHPFDASKWSHVQNFLSDDGVLKQKRIVEPVEATRDDLLVVHTEKYLDSLNSSYVVAQITEVAPVAFLPNFLVQWKLLHPFRKQVGGTVLSAKLAKERGWAINIGGGFHHCCANEGGGFCAYADITLAIQFAYTRLAISRVIIIDLDAHQGNGHERDFTNDDRVYIIDMYNEDIYPQDFKARKRINQAVALKSGTKTDRYLALLSQELKKAATIFKPELVVYNAGTDVLEGDPLGRLLVSPEGVKQRDEMVFRFAKDQKSPIIMLTSGGYMKTSARVIADSIKNLAAKRLISLPSGSSGSSS |
Nucleotide Sequence
(Fasta) | ATTCTTAAAT AGTGGCGACG TGCAGAAATG GCGAAAATTT GGAGCTGGGT CCAAGTCGAC 60
AGTATTCGAA GCCTGTGTGT AGTTTCATTC CATCAGCGTG CAGGTTGTCT GGCTCAATTC 120
CCCATTCAAT CTGTTCTTTT GTACTTCGGG TTTTGTTCTG AGTAGTTATG GCAGCGTCAT 180
CAACACTACA AGAAGATCAA GTGAAGCAGA AGCAGCGTAT AGAGGCTAGT AAGCTCTATA 240
TCAATGTATC TCCCGACGAA AAGGATCCGG TCGTGTATTC AAGCTCTTAC AACGTCTCAT 300
TCCTGGGCAT CGAAAAGCTG CATCCTTTCG ATGCATCAAA GTGGAGCCAC GTACAAAACT 360
TTCTCTCAGA TGACGGAGTG CTGAAGCAGA AGCGCATAGT AGAACCTGTT GAGGCTACAA 420
GAGATGATCT TCTCGTGGTA CATACTGAAA AATATCTGGA TAGCTTAAAT AGCAGTTATG 480
TAGTGGCTCA AATTACTGAG GTAGCACCAG TGGCGTTTCT GCCGAACTTC TTAGTGCAGT 540
GGAAGCTTCT GCATCCTTTT CGAAAACAGG TAGGCGGTAC AGTACTGAGT GCTAAGTTAG 600
CCAAAGAGAG GGGCTGGGCC ATCAACATAG GAGGCGGCTT TCACCATTGT TGCGCCAACG 660
AGGGGGGTGG TTTTTGCGCT TATGCGGACA TCACTTTGGC TATTCAATTT GCGTACACAC 720
GTCTGGCTAT TTCAAGAGTG ATAATTATTG ACCTAGATGC TCACCAAGGT AACGGCCACG 780
AGCGGGACTT CACGAATGAT GACAGAGTCT ACATCATCGA CATGTACAAC GAAGACATCT 840
ATCCGCAGGA TTTCAAAGCT AGGAAACGGA TCAATCAAGC AGTTGCTCTG AAGAGCGGCA 900
CAAAAACCGA TAGGTACCTT GCACTATTGA GTCAAGAGTT GAAGAAAGCT GCAACCATCT 960
TTAAGCCAGA GCTGGTGGTG TACAATGCCG GAACTGACGT CCTGGAGGGT GATCCTCTGG 1020
GCAGGCTGCT TGTATCACCA GAGGGAGTGA AGCAACGGGA CGAAATGGTC TTCCGGTTTG 1080
CTAAAGACCA GAAATCCCCA ATTATCATGC TCACTTCAGG TGGCTATATG AAGACAAGTG 1140
CTCGCGTTAT TGCTGATTCT ATTAAAAACC TCGCTGCCAA GCGTCTCATT TCGCTTCCAA 1200
GTGGTTCCTC GGGATCATCA TCTTAAAGTT CATAAACAAA CCTCTTCCTC TTAGCACGTG 1260
GCTTTCGTAT AAGTTCACTT ATGTCGTGCA GGATAAAGCT TCAGAAGCTT CGTAAGCAGA 1320
GGATTTAAAC TGGAATAAAT AAGCTTAAAA CTGTACAGTC AGTGTGAATA TGCACAAAAG 1380
GCAGCACTAA CACAGCAGTA GAGGCCCTTG AACTTCGTGT AATCTTTAGC AATATCGAAC 1440
ATTAATTGGT CGAACGCAGT GCATATGTAG ATCTCCTCTC CTTTTATGTC GATAATAAAC 1500
TGTTTGCGCT TAATTTCAC
Nucleotide Fasta Sequence
>PP1S53_217V6.1|Class-I|Physcomitrella patens
ATTCTTAAATAGTGGCGACGTGCAGAAATGGCGAAAATTTGGAGCTGGGTCCAAGTCGACAGTATTCGAAGCCTGTGTGTAGTTTCATTCCATCAGCGTGCAGGTTGTCTGGCTCAATTCCCCATTCAATCTGTTCTTTTGTACTTCGGGTTTTGTTCTGAGTAGTTATGGCAGCGTCATCAACACTACAAGAAGATCAAGTGAAGCAGAAGCAGCGTATAGAGGCTAGTAAGCTCTATATCAATGTATCTCCCGACGAAAAGGATCCGGTCGTGTATTCAAGCTCTTACAACGTCTCATTCCTGGGCATCGAAAAGCTGCATCCTTTCGATGCATCAAAGTGGAGCCACGTACAAAACTTTCTCTCAGATGACGGAGTGCTGAAGCAGAAGCGCATAGTAGAACCTGTTGAGGCTACAAGAGATGATCTTCTCGTGGTACATACTGAAAAATATCTGGATAGCTTAAATAGCAGTTATGTAGTGGCTCAAATTACTGAGGTAGCACCAGTGGCGTTTCTGCCGAACTTCTTAGTGCAGTGGAAGCTTCTGCATCCTTTTCGAAAACAGGTAGGCGGTACAGTACTGAGTGCTAAGTTAGCCAAAGAGAGGGGCTGGGCCATCAACATAGGAGGCGGCTTTCACCATTGTTGCGCCAACGAGGGGGGTGGTTTTTGCGCTTATGCGGACATCACTTTGGCTATTCAATTTGCGTACACACGTCTGGCTATTTCAAGAGTGATAATTATTGACCTAGATGCTCACCAAGGTAACGGCCACGAGCGGGACTTCACGAATGATGACAGAGTCTACATCATCGACATGTACAACGAAGACATCTATCCGCAGGATTTCAAAGCTAGGAAACGGATCAATCAAGCAGTTGCTCTGAAGAGCGGCACAAAAACCGATAGGTACCTTGCACTATTGAGTCAAGAGTTGAAGAAAGCTGCAACCATCTTTAAGCCAGAGCTGGTGGTGTACAATGCCGGAACTGACGTCCTGGAGGGTGATCCTCTGGGCAGGCTGCTTGTATCACCAGAGGGAGTGAAGCAACGGGACGAAATGGTCTTCCGGTTTGCTAAAGACCAGAAATCCCCAATTATCATGCTCACTTCAGGTGGCTATATGAAGACAAGTGCTCGCGTTATTGCTGATTCTATTAAAAACCTCGCTGCCAAGCGTCTCATTTCGCTTCCAAGTGGTTCCTCGGGATCATCATCTTAAAGTTCATAAACAAACCTCTTCCTCTTAGCACGTGGCTTTCGTATAAGTTCACTTATGTCGTGCAGGATAAAGCTTCAGAAGCTTCGTAAGCAGAGGATTTAAACTGGAATAAATAAGCTTAAAACTGTACAGTCAGTGTGAATATGCACAAAAGGCAGCACTAACACAGCAGTAGAGGCCCTTGAACTTCGTGTAATCTTTAGCAATATCGAACATTAATTGGTCGAACGCAGTGCATATGTAGATCTCCTCTCCTTTTATGTCGATAATAAACTGTTTGCGCTTAATTTCAC
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
