| Tag |
Content |
| WERAM ID |
WERAM-Orla-0097 |
| Ensembl Protein ID |
ENSORLP00000012043.1 |
| Gene Name |
hdac8 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
3.50e-133 |
444.3 |
14 |
321 |
|
| Organism |
Oryzias latipes |
| Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90
+vay+y+ +++e ++++ +++pkr+s++h+L+ +ygl +++ vkp+ a++ee++kfh++ y+e+l+k++++ +++ + +++ f++g+
ENSORLP00000012043.1 14 RVAYVYSAQLLE--TCDTLSKVPKRASMVHSLIEAYGLLDHMSTVKPRVATMEEMSKFHTDSYLEHLHKISQDGDNDDP-QSADFGLGY 99
799***999765..79999******************************************************999988.899****** PP
class-1.txt 91 dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeaf 179
dcPv++g+++y++ ++Ga+l+aa++L ++++d+ainwaGG+hhakk+easGfcyvnD vl+il+l+ k++rvly+d+dlhhGDgveeaf
ENSORLP00000012043.1 100 DCPVTEGIYDYAASVGGATLTAAQCLLDQKCDVAINWAGGWHHAKKDEASGFCYVNDAVLGILKLREKYERVLYVDVDLHHGDGVEEAF 188
***************************************************************************************** PP
class-1.txt 180 yttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefn 268
++t++vmtvs+hk++++ffPgtGdl d+g +kg++yavnvPl+dgi+D++y+++f+sv+++v f+Pea+v+q+GaD++agD++++fn
ENSORLP00000012043.1 189 SFTSKVMTVSLHKFSPGFFPGTGDLCDTGLGKGRWYAVNVPLEDGIKDDRYYQVFTSVLQEVRAQFNPEALVMQLGADTMAGDPMCSFN 277
***************************************************************************************** PP
class-1.txt 269 lsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavv 312
++ g ++c++++ +++lp+l+lGGGGY+l n+aRcwty+ta v
ENSORLP00000012043.1 278 MTPVGVSRCLQYLLQWQLPTLLLGGGGYNLPNTARCWTYLTAEV 321
*****************************************865 PP
|
Protein Sequence
(Fasta) | AGMSEDDGIG SKRRVAYVYS AQLLETCDTL SKVPKRASMV HSLIEAYGLL DHMSTVKPRV 60
ATMEEMSKFH TDSYLEHLHK ISQDGDNDDP QSADFGLGYD CPVTEGIYDY AASVGGATLT 120
AAQCLLDQKC DVAINWAGGW HHAKKDEASG FCYVNDAVLG ILKLREKYER VLYVDVDLHH 180
GDGVEEAFSF TSKVMTVSLH KFSPGFFPGT GDLCDTGLGK GRWYAVNVPL EDGIKDDRYY 240
QVFTSVLQEV RAQFNPEALV MQLGADTMAG DPMCSFNMTP VGVSRCLQYL LQWQLPTLLL 300
GGGGYNLPNT ARCWTYLTAE VLGKTLSSEI PDHEFFTEYG PDYTLEISPS CRPDRNDSRH 360
LEQVTRTIKG VHCHVI 376Protein Fasta Sequence
>ENSORLP00000012043.1|Class-I|Oryzias latipes
AGMSEDDGIGSKRRVAYVYSAQLLETCDTLSKVPKRASMVHSLIEAYGLLDHMSTVKPRVATMEEMSKFHTDSYLEHLHKISQDGDNDDPQSADFGLGYDCPVTEGIYDYAASVGGATLTAAQCLLDQKCDVAINWAGGWHHAKKDEASGFCYVNDAVLGILKLREKYERVLYVDVDLHHGDGVEEAFSFTSKVMTVSLHKFSPGFFPGTGDLCDTGLGKGRWYAVNVPLEDGIKDDRYYQVFTSVLQEVRAQFNPEALVMQLGADTMAGDPMCSFNMTPVGVSRCLQYLLQWQLPTLLLGGGGYNLPNTARCWTYLTAEVLGKTLSSEIPDHEFFTEYGPDYTLEISPSCRPDRNDSRHLEQVTRTIKGVHCHVI |
Nucleotide Sequence
(Fasta) | GACTCAAGAG TGGACAGACG GGAAACTGCT AGCATCTCCC TGCTGCATCT TTATCCTTAA 60
GGCAGTTTAT GTGTCCTTTC TTCGTAAATG AGCGGGGATG AGTGAAGATG ACGGGATCGG 120
CAGCAAAAGG AGAGTTGCGT ATGTTTACAG CGCACAGCTC CTGGAGACTT GCGACACTTT 180
ATCCAAAGTA CCGAAACGGG CCAGCATGGT GCACTCGCTG ATCGAAGCCT ACGGACTGCT 240
GGACCACATG AGTACTGTGA AACCTCGTGT TGCCACCATG GAGGAAATGT CAAAGTTCCA 300
CACAGACTCC TATCTGGAGC ATCTTCATAA GATCAGCCAG GATGGGGACA ACGACGACCC 360
CCAGTCGGCT GATTTTGGAC TTGGCTATGA CTGTCCAGTC ACGGAGGGCA TTTATGACTA 420
CGCAGCTTCA GTAGGGGGCG CTACACTAAC AGCAGCGCAG TGTCTGTTGG ACCAAAAATG 480
TGACGTGGCA ATCAACTGGG CAGGAGGGTG GCATCACGCT AAAAAAGATG AGGCTTCGGG 540
TTTCTGTTAT GTGAATGATG CCGTGTTGGG AATCCTCAAG CTCAGAGAGA AATATGAAAG 600
AGTGCTTTAC GTTGATGTTG ACTTGCACCA TGGAGATGGT GTTGAAGAGG CGTTCAGTTT 660
CACCTCTAAA GTTATGACTG TTTCCCTGCA TAAGTTTTCT CCTGGATTCT TCCCTGGTAC 720
AGGTGACCTT TGTGACACAG GGCTGGGGAA AGGTCGCTGG TATGCTGTCA ACGTTCCTCT 780
TGAGGATGGT ATCAAGGACG ACAGATACTA CCAAGTTTTC ACCAGTGTCC TGCAGGAGGT 840
CCGAGCACAG TTCAACCCAG AGGCGCTGGT AATGCAGCTG GGTGCCGACA CCATGGCAGG 900
TGATCCCATG TGCTCCTTCA ACATGACCCC GGTGGGGGTG AGCAGATGTC TACAGTACTT 960
GCTACAGTGG CAGCTACCCA CTCTTCTGCT GGGAGGAGGA GGTTATAATC TTCCCAATAC 1020
AGCTCGCTGT TGGACGTACC TGACGGCAGA GGTGCTGGGA AAGACTCTGT CCTCTGAAAT 1080
ACCTGACCAC GAGTTCTTCA CAGAATACGG ACCAGACTAC ACCCTGGAAA TCAGTCCAAG 1140
CTGTAGACCA GACCGCAACG ACAGCAGACA CCTGGAGCAG GTCACCAGAA CCATCAAAGG 1200
TGTCCATTGT CACGTTATA
Nucleotide Fasta Sequence
>ENSORLP00000012043.1|Class-I|Oryzias latipes
GACTCAAGAGTGGACAGACGGGAAACTGCTAGCATCTCCCTGCTGCATCTTTATCCTTAAGGCAGTTTATGTGTCCTTTCTTCGTAAATGAGCGGGGATGAGTGAAGATGACGGGATCGGCAGCAAAAGGAGAGTTGCGTATGTTTACAGCGCACAGCTCCTGGAGACTTGCGACACTTTATCCAAAGTACCGAAACGGGCCAGCATGGTGCACTCGCTGATCGAAGCCTACGGACTGCTGGACCACATGAGTACTGTGAAACCTCGTGTTGCCACCATGGAGGAAATGTCAAAGTTCCACACAGACTCCTATCTGGAGCATCTTCATAAGATCAGCCAGGATGGGGACAACGACGACCCCCAGTCGGCTGATTTTGGACTTGGCTATGACTGTCCAGTCACGGAGGGCATTTATGACTACGCAGCTTCAGTAGGGGGCGCTACACTAACAGCAGCGCAGTGTCTGTTGGACCAAAAATGTGACGTGGCAATCAACTGGGCAGGAGGGTGGCATCACGCTAAAAAAGATGAGGCTTCGGGTTTCTGTTATGTGAATGATGCCGTGTTGGGAATCCTCAAGCTCAGAGAGAAATATGAAAGAGTGCTTTACGTTGATGTTGACTTGCACCATGGAGATGGTGTTGAAGAGGCGTTCAGTTTCACCTCTAAAGTTATGACTGTTTCCCTGCATAAGTTTTCTCCTGGATTCTTCCCTGGTACAGGTGACCTTTGTGACACAGGGCTGGGGAAAGGTCGCTGGTATGCTGTCAACGTTCCTCTTGAGGATGGTATCAAGGACGACAGATACTACCAAGTTTTCACCAGTGTCCTGCAGGAGGTCCGAGCACAGTTCAACCCAGAGGCGCTGGTAATGCAGCTGGGTGCCGACACCATGGCAGGTGATCCCATGTGCTCCTTCAACATGACCCCGGTGGGGGTGAGCAGATGTCTACAGTACTTGCTACAGTGGCAGCTACCCACTCTTCTGCTGGGAGGAGGAGGTTATAATCTTCCCAATACAGCTCGCTGTTGGACGTACCTGACGGCAGAGGTGCTGGGAAAGACTCTGTCCTCTGAAATACCTGACCACGAGTTCTTCACAGAATACGGACCAGACTACACCCTGGAAATCAGTCCAAGCTGTAGACCAGACCGCAACGACAGCAGACACCTGGAGCAGGTCACCAGAACCATCAAAGGTGTCCATTGTCACGTTATA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
